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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK960986
Clone id TST39A01NGRL0008_O09
Library
Length 514
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_O09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTTATGTAGTGCATACAGCTAGGGAGCACAGGGGATATGGAGGCGATGAAGGTGCTAATC
AGGAATGCGACTGTGCGGATGCCGTGCGCCCGATCTGTAGTGCATTGCTTGAGCAGAAAA
AGGAAGATCTCCGCCGCAAACTGGTGTTGCAGACACATCAAGTATAGGACAGCGCTGCTG
CTCTGCTTCTCTTCCTCTGGCTCACAAAACAGAGGAGGCGCCCATAAATCTAGACGAAGG
TAAGGGCGGCGCTGCTTCCATTGTTGGTAGTCTCTCACAGTACCTTCTCAAGGGTTGCAC
ACCTTGGCATGAAGCCCCTTCTTGCCCTGACTATGTTGGCCCTGTTGAGGTTGCTTGCAC
CCCCGATGGCTGCGGCCGTGGCCTCTTTGCCACACATGATGTGCACGCAGGTACCCTTCT
CCTCATCAGCGACCCTATGGCCATCTCCTACGATGATCCCCACCGCATCGAGCTGCTCTC
CAAACTGGTCACAATGACAGCAGAAGACCCTCTT
■■Homology search results ■■ -
sp_hit_id Q65SW3
Definition sp|Q65SW3|MODC_MANSM Molybdenum import ATP-binding protein modC OS=Mannheimia succiniciproducens (strain MBEL55E)
Align length 40
Score (bit) 32.7
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960986|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_O09, 5'
         (514 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q65SW3|MODC_MANSM Molybdenum import ATP-binding protein modC ...    33   1.0  
sp|Q495B1|AKD1A_HUMAN Ankyrin repeat and death domain-containing...    31   3.9  
sp|O05678|3MGH_MYCLE Putative 3-methyladenine DNA glycosylase OS...    31   3.9  
sp|P33524|CRU2_BRANA Cruciferin BnC2 OS=Brassica napus GN=BnC2 P...    30   5.0  
sp|Q2H9L1|DOT1_CHAGB Histone-lysine N-methyltransferase, H3 lysi...    30   6.7  
sp|Q6DFC8|ZN395_XENLA Zinc finger protein 395 OS=Xenopus laevis ...    30   8.7  
sp|Q8BSN9|FAKD3_MOUSE FAST kinase domain-containing protein 3 OS...    30   8.7  

>sp|Q65SW3|MODC_MANSM Molybdenum import ATP-binding protein modC
           OS=Mannheimia succiniciproducens (strain MBEL55E)
           GN=modC PE=3 SV=1
          Length = 352

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -3

Query: 230 DLWAPPLFCEPEEEKQSSSAVLYLMCLQHQFAAEIFLFLL 111
           +LW  PLF EP +E+   SAVL L  L H F+ ++   LL
Sbjct: 216 NLWQSPLF-EPWQEQGQKSAVLSLPILNHNFSYKMTALLL 254


>sp|Q495B1|AKD1A_HUMAN Ankyrin repeat and death domain-containing
           protein 1A OS=Homo sapiens GN=ANKDD1A PE=2 SV=1
          Length = 423

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -1

Query: 475 QLDAVGIIVGDG--HRVADEEKGTCVHIMCGK 386
           QLDA+  +VG G  H V D+E  T +H+  G+
Sbjct: 80  QLDALDFLVGSGCDHNVKDKEGNTALHLAAGR 111


>sp|O05678|3MGH_MYCLE Putative 3-methyladenine DNA glycosylase
           OS=Mycobacterium leprae GN=ML1351 PE=3 SV=2
          Length = 214

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -1

Query: 409 CVHIMCGKEATAAAI---GGASNLNRANIVRARRGFMPRCATLEK 284
           C ++ CG + TAAA+    GA   N A++ R+RRG   R   L +
Sbjct: 92  CANVSCGPDGTAAAVLIRAGALE-NGADVARSRRGASVRTVALAR 135


>sp|P33524|CRU2_BRANA Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3
           SV=2
          Length = 496

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -3

Query: 422 GEGYLRAHHVWQRGHGRSHRGCKQPQQGQHSQGKKGLHAKV 300
           G+G  +     Q+G G+  +G  Q QQGQ  QG + +H KV
Sbjct: 136 GQGQGQGQGKGQQGQGKGQQGQSQGQQGQ-GQGFRDMHQKV 175


>sp|Q2H9L1|DOT1_CHAGB Histone-lysine N-methyltransferase, H3
           lysine-79 specific OS=Chaetomium globosum GN=DOT1 PE=3
           SV=1
          Length = 510

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 420 RRVPACTSCVAKRPRPQP-SGVQATSTGPT*SGQEGAS 310
           R  P  +S   KRPRP+P +G  + +TGP+ S    AS
Sbjct: 48  RASPTPSSLQVKRPRPRPGAGAASPATGPSLSSSTSAS 85


>sp|Q6DFC8|ZN395_XENLA Zinc finger protein 395 OS=Xenopus laevis
           GN=znf395 PE=2 SV=1
          Length = 498

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +2

Query: 140 TGVADTSSIGQRCCSASLPLAHKTEEAPINLDEGKGGAASIVGSLSQYLLKGCTPWHEAP 319
           T    TS+  QR  S S+ +  +  +A + +DE    AA ++ SLS      C+P  ++P
Sbjct: 142 TSPGATSTSAQRSVSRSIDVPKRRSDA-VEMDEMM--AAMVLTSLS------CSPIVQSP 192

Query: 320 SCPDYVGPVEVAC 358
            C D +    V C
Sbjct: 193 PCTDSIPAPRVTC 205


>sp|Q8BSN9|FAKD3_MOUSE FAST kinase domain-containing protein 3
           OS=Mus musculus GN=Fastkd3 PE=2 SV=2
          Length = 661

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
 Frame = +2

Query: 176 CCSASLPL-AHKTEEAPINLDEGKGGAASIVGSLSQYLLKGCTPWHEAPSCPDYVGPVEV 352
           CCS   PL  H  +   I       G   ++GS   +  K  TP++       Y   VEV
Sbjct: 526 CCSLETPLDLHLYKSVVI-------GLIDLLGSRLYFASKVLTPYY-------YTIDVEV 571

Query: 353 ACTPDGCGRGLFATHDVHAGTLLLISDPMAISYDDPHRIELLSKLVT 493
               DG         D+H    L I  P     D  H   LL K  T
Sbjct: 572 KLDEDGFVLPCTVDEDIHKRVALCIDGPQRFCLDSKH---LLGKEAT 615
tr_hit_id A9U604
Definition tr|A9U604|A9U604_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 57
Score (bit) 55.5
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK960986|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_O09, 5'
         (514 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U604|A9U604_PHYPA Predicted protein OS=Physcomitrella paten...    55   2e-06
tr|A9TID7|A9TID7_PHYPA Predicted protein OS=Physcomitrella paten...    55   2e-06
tr|A8JCM2|A8JCM2_CHLRE Histone methyltransferase OS=Chlamydomona...    47   7e-04
tr|B4F9T1|B4F9T1_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.008
tr|A9SV99|A9SV99_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.031
tr|A8I6N2|A8I6N2_CHLRE Histone methyltransferase OS=Chlamydomona...    41   0.031
tr|A8PRY1|A8PRY1_MALGO Putative uncharacterized protein OS=Malas...    40   0.089
tr|A8I6N5|A8I6N5_CHLRE Predicted protein (Fragment) OS=Chlamydom...    39   0.15 
tr|B7FQW4|B7FQW4_PHATR Predicted protein OS=Phaeodactylum tricor...    38   0.26 
tr|A8JBK7|A8JBK7_CHLRE Predicted protein OS=Chlamydomonas reinha...    37   0.44 
tr|A8I6N8|A8I6N8_CHLRE Predicted protein (Fragment) OS=Chlamydom...    37   0.58 
tr|Q9LQX6|Q9LQX6_ARATH T24P13.14 OS=Arabidopsis thaliana PE=4 SV=1     37   0.75 
tr|Q5NRN1|Q5NRN1_SOLDE TPR domain containing protein, putative O...    37   0.75 
tr|A7QUQ3|A7QUQ3_VITVI Chromosome chr10 scaffold_179, whole geno...    37   0.75 
tr|A5BCK6|A5BCK6_VITVI Putative uncharacterized protein OS=Vitis...    37   0.75 
tr|B5HB10|B5HB10_STRPR Predicted protein OS=Streptomyces pristin...    35   1.7  
tr|Q6F2D2|Q6F2D2_SOLDE Putative TPR domain containing protein, i...    35   1.7  
tr|A4S4E3|A4S4E3_OSTLU Predicted protein OS=Ostreococcus lucimar...    35   1.7  
tr|Q3V655|Q3V655_SOLTU MAP kinase phosphatase 1 OS=Solanum tuber...    35   2.1  
tr|A9FN07|A9FN07_SORC5 Putative DNA helicase OS=Sorangium cellul...    35   2.2  
tr|A7IYA6|A7IYA6_9CAUD Gp35 OS=Corynebacterium phage P1201 PE=4 ...    35   2.8  
tr|Q5AY01|Q5AY01_EMENI Putative uncharacterized protein OS=Emeri...    35   2.9  
tr|B0FPE4|B0FPE4_DATME MAP kinase phosphatase OS=Datura metel PE...    34   3.7  
tr|A3P9M8|A3P9M8_BURP0 Putative uncharacterized protein OS=Burkh...    34   3.7  
tr|A3NP56|A3NP56_BURP6 Putative uncharacterized protein OS=Burkh...    34   3.7  
tr|B7CWA0|B7CWA0_BURPS Putative uncharacterized protein OS=Burkh...    34   3.7  
tr|Q60D23|Q60D23_SOLDE TPR domain containing protein, putative O...    34   3.7  
tr|Q4PDE6|Q4PDE6_USTMA Putative uncharacterized protein OS=Ustil...    34   3.7  
tr|B1Y033|B1Y033_LEPCP AAA ATPase central domain protein OS=Lept...    34   4.9  
tr|B6MCV8|B6MCV8_BRAFL Putative uncharacterized protein OS=Branc...    34   4.9  

>tr|A9U604|A9U604_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_173749 PE=4 SV=1
          Length = 1117

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 30/57 (52%), Positives = 36/57 (63%)
 Frame = +2

Query: 272 LSQYLLKGCTPWHEAPSCPDYVGPVEVACTPDGCGRGLFATHDVHAGTLLLISDPMA 442
           LS Y LKG     E+P C DY+GPV +     G GRGL  T DV AG LLL+S+P+A
Sbjct: 719 LSHYYLKGKQAG-ESPFCADYIGPVIITDVGRGRGRGLVLTKDVEAGELLLVSNPIA 774


>tr|A9TID7|A9TID7_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_170248 PE=4 SV=1
          Length = 1301

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
 Frame = +2

Query: 272  LSQYLLKGCTPWHEAPSCPDYVGPVEVACTPDGCGRGLFATHDVHAGTLLLISDPMA--- 442
            L+ Y LKG     E+P C DY+GPV +     G GRGL  T DV AG LLL+S+P+A   
Sbjct: 795  LAHYYLKGRQAG-ESPFCADYIGPVIITDVGRGRGRGLVLTKDVEAGELLLVSNPIAFLP 853

Query: 443  ISYDDPHRIELLSKLV 490
            +   D  R E+   LV
Sbjct: 854  LQEGDHSRTEMSQGLV 869


>tr|A8JCM2|A8JCM2_CHLRE Histone methyltransferase OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_178280 PE=4 SV=1
          Length = 711

 Score = 46.6 bits (109), Expect = 7e-04
 Identities = 32/91 (35%), Positives = 45/91 (49%)
 Frame = +2

Query: 242 KGGAASIVGSLSQYLLKGCTPWHEAPSCPDYVGPVEVACTPDGCGRGLFATHDVHAGTLL 421
           +G A S V + +Q           A      VGPV +A   DG GRGL A+  V  G LL
Sbjct: 125 RGSAPSAVAAAAQAAADALFTDPGAGPLAPQVGPVAIADLGDGRGRGLVASRTVQPGELL 184

Query: 422 LISDPMAISYDDPHRIELLSKLVTMTAEDPL 514
           L   P+A+++DD      L+ L +  A+DP+
Sbjct: 185 LAVRPLALAWDDG-----LAALGSSLAQDPV 210


>tr|B4F9T1|B4F9T1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 544

 Score = 43.1 bits (100), Expect = 0.008
 Identities = 26/58 (44%), Positives = 38/58 (65%)
 Frame = +2

Query: 272 LSQYLLKGCTPWHEAPSCPDYVGPVEVACTPDGCGRGLFATHDVHAGTLLLISDPMAI 445
           LS+++L G +   + P   +YVG VEV  +P G GRG+FA  +V AGT L+I+  +AI
Sbjct: 149 LSEWVLAGFSG--KFPDLAEYVGCVEVRRSPHG-GRGVFAVKNVEAGTTLIIAKAVAI 203


>tr|A9SV99|A9SV99_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_84447 PE=4 SV=1
          Length = 691

 Score = 41.2 bits (95), Expect = 0.031
 Identities = 24/60 (40%), Positives = 35/60 (58%)
 Frame = +2

Query: 269 SLSQYLLKGCTPWHEAPSCPDYVGPVEVACTPDGCGRGLFATHDVHAGTLLLISDPMAIS 448
           SL +Y L G       P   D++G V++    DG GRGL  + +V AG +LLI +P+AI+
Sbjct: 242 SLEEYCLSGGRML--PPLVEDFIGSVKINRVGDGRGRGLVLSSNVAAGDVLLICNPIAIA 299


>tr|A8I6N2|A8I6N2_CHLRE Histone methyltransferase OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_142738 PE=4 SV=1
          Length = 953

 Score = 41.2 bits (95), Expect = 0.031
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +2

Query: 329 DYVGPVEVACTPDGCGRGLFATHDVHAGTLLLISDPMAISY 451
           D++GPV+VA   +G GRGL+ T  V AG LLL     A+ Y
Sbjct: 431 DFIGPVQVADAGEGRGRGLYTTAPVRAGQLLLAMRADAVCY 471


>tr|A8PRY1|A8PRY1_MALGO Putative uncharacterized protein
           OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
           GN=MGL_0153 PE=4 SV=1
          Length = 880

 Score = 39.7 bits (91), Expect = 0.089
 Identities = 23/41 (56%), Positives = 24/41 (58%)
 Frame = +2

Query: 329 DYVGPVEVACTPDGCGRGLFATHDVHAGTLLLISDPMAISY 451
           +YVGPV VA  P G GRGL  T DV  G LLL    M  SY
Sbjct: 443 EYVGPVCVADIP-GAGRGLVLTRDVEEGELLLFCRAMGSSY 482


>tr|A8I6N5|A8I6N5_CHLRE Predicted protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_142739 PE=4
           SV=1
          Length = 504

 Score = 38.9 bits (89), Expect = 0.15
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = +2

Query: 329 DYVGPVEVACTPDGCGRGLFATHDVHAGTLLL 424
           D++GPV+VA   +G GRGL+ T  V AG LLL
Sbjct: 248 DFIGPVQVADAGEGRGRGLYMTAPVRAGQLLL 279


>tr|B7FQW4|B7FQW4_PHATR Predicted protein OS=Phaeodactylum
           tricornutum CCAP 1055/1 GN=PHATRDRAFT_43177 PE=4 SV=1
          Length = 513

 Score = 38.1 bits (87), Expect = 0.26
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = +2

Query: 248 GAASIVGSLSQYLLKGCTPWHEAPSCPDYVGPVE-VACTPDGCGRGLFATHDVHAGTLLL 424
           G  S+  + S+ +   C  W      P Y+GP++ V   P G GRG  A  D+  GTL+L
Sbjct: 55  GVVSVADTSSRSISSVCE-WSPPWPKPVYLGPMKLVKSLPYGGGRGYIAERDLEPGTLVL 113

Query: 425 ISDPM 439
           + +P+
Sbjct: 114 LEEPI 118


>tr|A8JBK7|A8JBK7_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_178069 PE=4 SV=1
          Length = 258

 Score = 37.4 bits (85), Expect = 0.44
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +2

Query: 326 PDYVGPVEVACTPDGCGRGLFATHDVHAGTLLLI-SDPMAISYDDPHRIELLSKLVTMTA 502
           P Y GP+E+   P G G G++   DV AGTLLL+ + P+A+    P   ++   +V   A
Sbjct: 77  PHYCGPLELREVP-GAGVGVYVREDVAAGTLLLLATHPLALLRSGPGGGQVGDVMVVRAA 135

Query: 503 ED 508
            D
Sbjct: 136 AD 137