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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961001
Clone id TST39A01NGRL0008_O24
Library
Length 411
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_O24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTATTGTGCGACCAAACCAACATGAAGTTGCGGGATCTCTAGATATTTCTACTAAATCAA
AATCTCCGCAGAGAGTCACGCTGATTAGAAAACATTGCTTCCTTCATGTTTTCCTAATTG
AGTTCAGACAGTTCTGTCATATACGACATCGATAAGGCGTTTTAACAACATGTAAGGAGG
CTCCACTTTATTGTAGCCTCTCCATGGAAGGATCATTCGATTACATAATCTTGTGTGCCA
TTTCCATTTGAACGACATTGCATACTCATGTATATTCACTATGTGGATTGTCATTTGAAG
GGGACATATATATCTTAGAAACAAGAAATGCCCGTTTCGGGCCCTGTTCGTGCTCCAAAA
AAAAAAAAAAAAGAAAAAAAAATATCAAAAAAAAGAAAAGAAAAACCCCAC
■■Homology search results ■■ -
sp_hit_id Q60HG0
Definition sp|Q60HG0|FKTN_MACFA Fukutin OS=Macaca fascicularis
Align length 44
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961001|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_O24, 5'
         (356 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q60HG0|FKTN_MACFA Fukutin OS=Macaca fascicularis GN=FKTN PE=2...    31   1.7  
sp|Q34952|CYB_LORTA Cytochrome b OS=Loris tardigradus GN=MT-CYB ...    31   2.2  
sp|O75072|FKTN_HUMAN Fukutin OS=Homo sapiens GN=FKTN PE=1 SV=2         30   2.9  
sp|Q94ZD1|CYB_EPTBU Cytochrome b OS=Eptatretus burgeri GN=MT-CYB...    30   2.9  
sp|Q508K9|CYB_CHAGD Cytochrome b OS=Chaetodipus goldmani GN=MT-C...    30   2.9  
sp|O48027|CYB_CASDU Cytochrome b OS=Casarea dussumieri GN=MT-CYB...    30   2.9  
sp|Q8R507|FKTN_MOUSE Fukutin OS=Mus musculus GN=Fktn PE=2 SV=1         30   3.8  
sp|Q508K6|CYB_CHARD Cytochrome b OS=Chaetodipus rudinoris GN=MT-...    30   3.8  
sp|Q508L3|CYB_CHANE Cytochrome b OS=Chaetodipus nelsoni GN=MT-CY...    30   3.8  
sp|Q508L6|CYB_CHAFO Cytochrome b OS=Chaetodipus formosus GN=MT-C...    30   3.8  
sp|P18786|HISX_AZOBR Putative histidinol dehydrogenase (Fragment...    29   6.5  
sp|Q8WEK2|CYB_THOMO Cytochrome b OS=Thomomys monticola GN=MT-CYB...    29   6.5  
sp|P51941|CYB_DROSU Cytochrome b (Fragment) OS=Drosophila subobs...    29   6.5  
sp|Q508L0|CYB_CHABA Cytochrome b OS=Chaetodipus baileyi GN=MT-CY...    29   6.5  
sp|Q508K7|CYB_CHAAD Cytochrome b OS=Chaetodipus artus GN=MT-CYB ...    29   6.5  
sp|Q37378|CYB_ACACA Cytochrome b OS=Acanthamoeba castellanii GN=...    29   6.5  
sp|Q8WEK7|CYB_THOMA Cytochrome b OS=Thomomys mazama GN=MT-CYB PE...    29   8.5  
sp|Q71MR6|CYB_MYOAO Cytochrome b OS=Myoprocta acouchy GN=MT-CYB ...    29   8.5  
sp|A3QU28|CYB_EPIBI Cytochrome b OS=Epiperipatus biolleyi GN=mt:...    29   8.5  
sp|Q9MDZ9|CYB_DROSI Cytochrome b OS=Drosophila simulans GN=mt:Cy...    29   8.5  
sp|P18935|CYB_DROME Cytochrome b OS=Drosophila melanogaster GN=m...    29   8.5  
sp|Q9MGM4|CYB_DROMA Cytochrome b OS=Drosophila mauritiana GN=mt:...    29   8.5  
sp|Q94ND7|CYB_CTETC Cytochrome b OS=Ctenomys tuconax GN=MT-CYB P...    29   8.5  
sp|Q8WDV2|CYB_CRAZI Cytochrome b OS=Cratogeomys zinseri GN=MT-CY...    29   8.5  
sp|Q34261|CYB_CRANE Cytochrome b OS=Cratogeomys neglectus GN=MT-...    29   8.5  
sp|Q8WDV6|CYB_CRAFU Cytochrome b OS=Cratogeomys fumosus GN=MT-CY...    29   8.5  

>sp|Q60HG0|FKTN_MACFA Fukutin OS=Macaca fascicularis GN=FKTN PE=2
           SV=1
          Length = 461

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -3

Query: 318 LRYICPLQM-TIHIVNIHEYAMSFKWKWHTRL---CNRMILPWR 199
           L YIC L    IH+V  HE + ++ W  H RL    +R  +P+R
Sbjct: 160 LHYICKLAAHAIHLVVFHERSSNYLWHGHLRLKEHIDRKFVPFR 203


>sp|Q34952|CYB_LORTA Cytochrome b OS=Loris tardigradus GN=MT-CYB
           PE=3 SV=1
          Length = 379

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 234 TRLCNRMILPWRGYNKVEPPYMLLKRLIDVVYDRTV 127
           T + N M+L W G   VE P++++ +L  ++Y  T+
Sbjct: 327 TLVANLMVLTWIGGQPVENPFIIIGQLASIMYFSTI 362


>sp|O75072|FKTN_HUMAN Fukutin OS=Homo sapiens GN=FKTN PE=1 SV=2
          Length = 461

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -3

Query: 318 LRYICPLQM-TIHIVNIHEYAMSFKWKWHTRL---CNRMILPWR 199
           L YIC L    IH+V  HE + ++ W  H RL    +R  +P+R
Sbjct: 160 LHYICKLATHAIHLVVFHERSGNYLWHGHLRLKEHIDRKFVPFR 203


>sp|Q94ZD1|CYB_EPTBU Cytochrome b OS=Eptatretus burgeri GN=MT-CYB
           PE=3 SV=1
          Length = 385

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN + L W G   +EPP++L+ ++   +Y
Sbjct: 330 VCNFIFLSWLGAMPLEPPFILMSQISSFIY 359


>sp|Q508K9|CYB_CHAGD Cytochrome b OS=Chaetodipus goldmani GN=MT-CYB
           PE=3 SV=1
          Length = 379

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -3

Query: 234 TRLCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           T + + MIL W G   VEPP++++ ++  ++Y
Sbjct: 327 TLISDLMILTWIGGQPVEPPFIIIGQIASILY 358


>sp|O48027|CYB_CASDU Cytochrome b OS=Casarea dussumieri GN=MT-CYB
           PE=3 SV=1
          Length = 371

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -3

Query: 303 PLQMTIHIVNIHEYAMSFKWKWHTRLCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           P   T H+ ++    MS    W T +   M + W     VEPP+M++ +   ++Y
Sbjct: 297 PFTHTAHVRSMTFRPMSQLMFW-TLISTFMTITWAATKPVEPPFMMISQTASMIY 350


>sp|Q8R507|FKTN_MOUSE Fukutin OS=Mus musculus GN=Fktn PE=2 SV=1
          Length = 461

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -3

Query: 318 LRYICPLQM-TIHIVNIHEYAMSFKWKWHTRL---CNRMILPWR 199
           L Y+C L    IH+V  HE + ++ W  H RL    +R  +P+R
Sbjct: 160 LHYVCKLTTHAIHLVVFHERSGNYLWHGHLRLKGHMDRKFVPFR 203


>sp|Q508K6|CYB_CHARD Cytochrome b OS=Chaetodipus rudinoris GN=MT-CYB
           PE=3 SV=1
          Length = 379

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -3

Query: 234 TRLCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           T + + MIL W G   VEPP++++ ++  ++Y
Sbjct: 327 TLVSDLMILTWIGGQPVEPPFIIIGQIASILY 358


>sp|Q508L3|CYB_CHANE Cytochrome b OS=Chaetodipus nelsoni GN=MT-CYB
           PE=3 SV=1
          Length = 379

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -3

Query: 234 TRLCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           T + + MIL W G   VEPP++++ ++  ++Y
Sbjct: 327 TLVSDLMILTWIGGQPVEPPFIIIGQIASILY 358


>sp|Q508L6|CYB_CHAFO Cytochrome b OS=Chaetodipus formosus GN=MT-CYB
           PE=3 SV=1
          Length = 379

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -3

Query: 234 TRLCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           T + + MIL W G   VEPP++++ ++  ++Y
Sbjct: 327 TLVSDLMILTWIGGQPVEPPFIIIGQIASILY 358
tr_hit_id Q9MM25
Definition tr|Q9MM25|Q9MM25_9HYME Cytochrome b (Fragment) OS=Pontania pustulator
Align length 30
Score (bit) 38.5
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961001|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_O24, 5'
         (356 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9MM25|Q9MM25_9HYME Cytochrome b (Fragment) OS=Pontania pustu...    39   0.17 
tr|Q9MM23|Q9MM23_9HYME Cytochrome b (Fragment) OS=Pontania aesti...    39   0.17 
tr|Q9MM21|Q9MM21_9HYME Cytochrome b (Fragment) OS=Pontania glabr...    39   0.17 
tr|Q9MM14|Q9MM14_9HYME Cytochrome b (Fragment) OS=Pontania sp. P...    39   0.17 
tr|Q9MM20|Q9MM20_9HYME Cytochrome b (Fragment) OS=Pontania sp. P...    37   0.38 
tr|Q9MM18|Q9MM18_9HYME Cytochrome b (Fragment) OS=Pontania nival...    37   0.38 
tr|Q9MM17|Q9MM17_9HYME Cytochrome b (Fragment) OS=Pontania pedun...    37   0.38 
tr|Q9MM16|Q9MM16_9HYME Cytochrome b (Fragment) OS=Pontania retic...    37   0.38 
tr|Q9MM15|Q9MM15_9HYME Cytochrome b (Fragment) OS=Pontania samol...    37   0.38 
tr|A8CHI0|A8CHI0_9HYME Cytochrome b (Fragment) OS=Pontania varia...    37   0.38 
tr|A8CH52|A8CH52_9HYME Cytochrome b (Fragment) OS=Pontania vimin...    37   0.38 
tr|A8CH44|A8CH44_9HYME Cytochrome b (Fragment) OS=Pontania samol...    37   0.38 
tr|A8CH38|A8CH38_9HYME Cytochrome b (Fragment) OS=Pontania retic...    37   0.38 
tr|A8CH25|A8CH25_9HYME Cytochrome b (Fragment) OS=Pontania norve...    37   0.38 
tr|A8CH20|A8CH20_9HYME Cytochrome b (Fragment) OS=Pontania nival...    37   0.38 
tr|A8CH11|A8CH11_9HYME Cytochrome b (Fragment) OS=Pontania myrsi...    37   0.38 
tr|A8CH05|A8CH05_9HYME Cytochrome b (Fragment) OS=Pontania kriec...    37   0.38 
tr|A8CGZ4|A8CGZ4_9HYME Cytochrome b (Fragment) OS=Pontania glabr...    37   0.38 
tr|A8CGY9|A8CGY9_9HYME Cytochrome b (Fragment) OS=Pontania galla...    37   0.38 
tr|A8CGW2|A8CGW2_9HYME Cytochrome b (Fragment) OS=Pontania retus...    37   0.38 
tr|Q9MM34|Q9MM34_9HYME Cytochrome b (Fragment) OS=Euura amerinae...    36   0.85 
tr|Q9MM27|Q9MM27_9HYME Cytochrome b (Fragment) OS=Euura testacei...    36   0.85 
tr|A8WRE6|A8WRE6_CAEBR Putative uncharacterized protein OS=Caeno...    35   1.5  
tr|Q9MM32|Q9MM32_9HYME Cytochrome b (Fragment) OS=Euura lanatae ...    35   1.9  
tr|Q9MM13|Q9MM13_9HYME Cytochrome b (Fragment) OS=Pontania trian...    35   1.9  
tr|A8CH98|A8CH98_9HYME Cytochrome b (Fragment) OS=Euura boreoalp...    35   1.9  
tr|A8CH74|A8CH74_9HYME Cytochrome b (Fragment) OS=Euura lappo GN...    35   1.9  
tr|A8CH68|A8CH68_9HYME Cytochrome b (Fragment) OS=Euura lanatae ...    35   1.9  
tr|A8CH59|A8CH59_9HYME Cytochrome b (Fragment) OS=Euura hastatae...    35   1.9  
tr|A8CGT7|A8CGT7_9HYME Cytochrome b (Fragment) OS=Pontania trian...    35   1.9  

>tr|Q9MM25|Q9MM25_9HYME Cytochrome b (Fragment) OS=Pontania
           pustulator PE=3 SV=1
          Length = 225

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY ++ ++  ++Y
Sbjct: 178 ICNIMLLTWIGYSPVEPPYEMMGQIFTLIY 207


>tr|Q9MM23|Q9MM23_9HYME Cytochrome b (Fragment) OS=Pontania aestiva
           PE=3 SV=1
          Length = 225

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY ++ ++  ++Y
Sbjct: 178 ICNIMLLTWIGYSPVEPPYEMMGQIFTLIY 207


>tr|Q9MM21|Q9MM21_9HYME Cytochrome b (Fragment) OS=Pontania
           glabrifrons PE=3 SV=1
          Length = 225

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY ++ ++  ++Y
Sbjct: 178 ICNIMLLTWIGYSPVEPPYEMMGQIFTLIY 207


>tr|Q9MM14|Q9MM14_9HYME Cytochrome b (Fragment) OS=Pontania sp. PE=3
           SV=1
          Length = 225

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY ++ ++  ++Y
Sbjct: 178 ICNIMLLTWIGYSPVEPPYEMMGQIFTLIY 207


>tr|Q9MM20|Q9MM20_9HYME Cytochrome b (Fragment) OS=Pontania sp. PE=3
           SV=1
          Length = 225

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY  + ++  ++Y
Sbjct: 178 ICNIMLLTWIGYSPVEPPYETMGQIFTLIY 207


>tr|Q9MM18|Q9MM18_9HYME Cytochrome b (Fragment) OS=Pontania nivalis
           PE=3 SV=1
          Length = 225

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY  + ++  ++Y
Sbjct: 178 ICNIMLLTWIGYSPVEPPYETMGQIFTLIY 207


>tr|Q9MM17|Q9MM17_9HYME Cytochrome b (Fragment) OS=Pontania
           pedunculi PE=3 SV=1
          Length = 225

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY  + ++  ++Y
Sbjct: 178 ICNIMLLTWIGYSPVEPPYETMGQIFTLIY 207


>tr|Q9MM16|Q9MM16_9HYME Cytochrome b (Fragment) OS=Pontania
           reticulatae PE=3 SV=1
          Length = 225

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY  + ++  ++Y
Sbjct: 178 ICNIMLLTWIGYSPVEPPYETMGQIFTLIY 207


>tr|Q9MM15|Q9MM15_9HYME Cytochrome b (Fragment) OS=Pontania samolad
           PE=3 SV=1
          Length = 225

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY  + ++  ++Y
Sbjct: 178 ICNIMLLTWIGYSPVEPPYETMGQIFTLIY 207


>tr|A8CHI0|A8CHI0_9HYME Cytochrome b (Fragment) OS=Pontania varia
           GN=cytb PE=3 SV=1
          Length = 238

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 228 LCNRMILPWRGYNKVEPPYMLLKRLIDVVY 139
           +CN M+L W GY+ VEPPY  + ++  ++Y
Sbjct: 190 ICNIMLLTWIGYSPVEPPYETMGQIFTLIY 219