| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961004|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_P04, 5'
(680 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic ... 159 1e-38
sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ... 159 2e-38
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ... 159 2e-38
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ... 158 3e-38
sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic ... 157 4e-38
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ... 157 4e-38
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ... 155 1e-37
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ... 155 2e-37
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop... 155 2e-37
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 155 2e-37
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 155 2e-37
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 155 2e-37
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 155 2e-37
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ... 154 5e-37
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 153 7e-37
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ... 153 9e-37
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ... 153 9e-37
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ... 152 2e-36
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa... 152 2e-36
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 151 3e-36
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido... 151 4e-36
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 150 5e-36
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ... 150 8e-36
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ... 149 1e-35
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ... 147 5e-35
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 146 1e-34
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=... 146 1e-34
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ... 145 1e-34
sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic ... 145 2e-34
sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B ... 145 3e-34
>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=pab1 PE=3 SV=1
Length = 731
Score = 159 bits (402), Expect = 1e-38
Identities = 76/117 (64%), Positives = 94/117 (80%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
PA + + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N
Sbjct: 46 PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
D RA+E LN+T + GK RIM+S RDP++RK+G N+FIKNLD IDNKALHDTF
Sbjct: 106 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTF 162
Score = 52.0 bits (123), Expect = 3e-06
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++Y+ +LD +++ + ++F G++ S + RD K S G+ +VN+S A A+E
Sbjct: 236 NVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHESAQAAVEE 294
Query: 535 LNFTEVNGKLM---RIMYSH-RDPSIRKSGAA------------NIFIKNLDKDIDNKAL 666
+N E+ + + R H R+ +RK A N+++KNL DID++ L
Sbjct: 295 MNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKL 354
Query: 667 HDTF 678
+ F
Sbjct: 355 RELF 358
Score = 51.2 bits (121), Expect = 5e-06
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD ++ L++ F + G +LS +V +D S GY +V+Y A A++
Sbjct: 143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 201
Query: 535 LNFTEVNGKLMRIMY--SHRDPSIR----KSGAANIFIKNLDKDIDNKALHDTF 678
+N +N K + + + S +D + K+ N++IKNLD +ID+ F
Sbjct: 202 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMF 255
Score = 30.4 bits (67), Expect = 9.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 337 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKR 471
S Y +LYV +L ++++ +L E+F G + S +V RD +R
Sbjct: 333 SKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRDTNVER 377
>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus terreus (strain NIH 2624) GN=pab1
PE=3 SV=1
Length = 753
Score = 159 bits (401), Expect = 2e-38
Identities = 76/117 (64%), Positives = 94/117 (80%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
P+ S + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N
Sbjct: 40 PSTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 99
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
D RA+E LN+T + GK RIM+S RDP++RK+G N+FIKNLD IDNKALHDTF
Sbjct: 100 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 156
Score = 57.0 bits (136), Expect = 9e-08
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++Y+ +LD ++E + ++F G++ S + RD K S G+ +VNYS A A++
Sbjct: 230 NVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGK-SRGFGFVNYSTHDSAQAAVDE 288
Query: 535 LNFTEVNGKLM---RIMYSH-RDPSIRKSGAA------------NIFIKNLDKDIDNKAL 666
+N EV G+ + R H R+ +RK A N+++KNL DID++ L
Sbjct: 289 MNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKL 348
Query: 667 HDTF 678
+ F
Sbjct: 349 REMF 352
Score = 50.1 bits (118), Expect = 1e-05
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD ++ L++ F + G +LS +V +D S GY +V+Y A A++
Sbjct: 137 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 195
Query: 535 LNFTEVNGKLMRIMY--SHRDPSIR----KSGAANIFIKNLDKDIDNKALHDTF 678
+N +N K + + + S +D + K+ N++IKNLD++I + F
Sbjct: 196 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMF 249
Score = 31.2 bits (69), Expect = 5.3
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 337 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRS 474
S Y +LYV +L ++++ +L E+F G + S +V RD +R+
Sbjct: 327 SKYQGVNLYVKNLTDDIDDEKLREMFAPYGTITSAKVMRDTNIERT 372
>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1
Length = 753
Score = 159 bits (401), Expect = 2e-38
Identities = 76/117 (64%), Positives = 94/117 (80%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
P+ S + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N
Sbjct: 44 PSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
D RA+E LN+T + GK RIM+S RDP++RK+G N+FIKNLD IDNKALHDTF
Sbjct: 104 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Score = 52.4 bits (124), Expect = 2e-06
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++Y+ ++D V + + ++F G++ S + RD K S G+ +VN+S A A++
Sbjct: 234 NVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHDSAQAAVDE 292
Query: 535 LNFTEVNGKLM---RIMYSH-RDPSIRKSGAA------------NIFIKNLDKDIDNKAL 666
+N E+ G+ + R H R+ +RK A N+++KNL D+D++ L
Sbjct: 293 MNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKL 352
Query: 667 HDTF 678
+ F
Sbjct: 353 RELF 356
Score = 48.5 bits (114), Expect = 3e-05
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD ++ L++ F + G +LS +V +D S GY +V+Y A A++
Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 199
Query: 535 LNFTEVNGKLMRIMY--SHRDPSIR----KSGAANIFIKNLDKDIDNKALHDTF 678
+N +N K + + + S +D + K+ N++IKN+D+++ ++ F
Sbjct: 200 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMF 253
Score = 35.8 bits (81), Expect = 0.22
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 46/146 (31%)
Frame = +1
Query: 337 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTK---------------- 468
S Y +LYV +L +V++ +L E+F+ G + S +V RD +T
Sbjct: 331 SKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTTGETSESEKEKEKESNK 390
Query: 469 ------------------------------RSLGYAYVNYSNIPDATRAMEVLNFTEVNG 558
+S G+ +V +S+ +A++A+ +N VNG
Sbjct: 391 ENEKEGEEKTEEKPKESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG 450
Query: 559 KLMRIMYSHRDPSIRKSGAANIFIKN 636
K + + + R R A+I +N
Sbjct: 451 KPLYVALAQRKDVRRSQLEASIQARN 476
>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1
Length = 765
Score = 158 bits (399), Expect = 3e-38
Identities = 76/117 (64%), Positives = 93/117 (79%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
P S + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N
Sbjct: 41 PNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 100
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
D RA+E LN+T + GK RIM+S RDP++RK+G N+FIKNLD IDNKALHDTF
Sbjct: 101 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTF 157
Score = 52.4 bits (124), Expect = 2e-06
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++Y+ ++D +V E + E+F G++ S + RD K S G+ +VN+S A A++
Sbjct: 231 NVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHESAQAAVDE 289
Query: 535 LNFTEVNGKLM---RIMYSH-RDPSIRKSGAA------------NIFIKNLDKDIDNKAL 666
+N E+ + + R H R+ +RK A N+++KNL D+D++ L
Sbjct: 290 MNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKL 349
Query: 667 HDTF 678
+ F
Sbjct: 350 RELF 353
Score = 50.8 bits (120), Expect = 6e-06
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD ++ L++ F + G +LS +V +D S GY +V+Y A A++
Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 196
Query: 535 LNFTEVNGKLMRIMY--SHRDPSIR----KSGAANIFIKNLDKDIDNKALHDTF 678
+N +N K + + + S +D + K+ N++IKN+D+D+ + + F
Sbjct: 197 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELF 250
Score = 30.8 bits (68), Expect = 6.9
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 337 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRS 474
S Y +LYV +L +V++ +L E+F G + S +V RD +R+
Sbjct: 328 SKYQGVNLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRDTNIERT 373
>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181) GN=pab1 PE=3 SV=1
Length = 751
Score = 157 bits (398), Expect = 4e-38
Identities = 75/117 (64%), Positives = 94/117 (80%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
P+ + + SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N
Sbjct: 44 PSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
D RA+E LN+T + GK RIM+S RDP++RK+G N+FIKNLD IDNKALHDTF
Sbjct: 104 ADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Score = 52.4 bits (124), Expect = 2e-06
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++Y+ ++D V + + ++F G++ S + RD K S G+ +VN+S A A++
Sbjct: 234 NVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHDSAQAAVDE 292
Query: 535 LNFTEVNGKLM---RIMYSH-RDPSIRKSGAA------------NIFIKNLDKDIDNKAL 666
+N E+ G+ + R H R+ +RK A N+++KNL D+D++ L
Sbjct: 293 MNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKL 352
Query: 667 HDTF 678
+ F
Sbjct: 353 RELF 356
Score = 48.5 bits (114), Expect = 3e-05
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD ++ L++ F + G +LS +V +D S GY +V+Y A A++
Sbjct: 141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 199
Query: 535 LNFTEVNGKLMRIMY--SHRDPSIR----KSGAANIFIKNLDKDIDNKALHDTF 678
+N +N K + + + S +D + K+ N++IKN+D+++ ++ F
Sbjct: 200 VNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMF 253
Score = 36.6 bits (83), Expect = 0.13
Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 44/144 (30%)
Frame = +1
Query: 337 SPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTK---------------- 468
S Y +LYV +L +V++ +L E+F+ G + S +V RD +T
Sbjct: 331 SKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKEN 390
Query: 469 ----------------------------RSLGYAYVNYSNIPDATRAMEVLNFTEVNGKL 564
+S G+ +V +S+ +A++A+ +N VNGK
Sbjct: 391 EKEGEEKTEEKPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKP 450
Query: 565 MRIMYSHRDPSIRKSGAANIFIKN 636
+ + + R R A+I +N
Sbjct: 451 LYVALAQRKDVRRSQLEASIQARN 474
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1
Length = 754
Score = 157 bits (398), Expect = 4e-38
Identities = 74/108 (68%), Positives = 90/108 (83%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
SLYVG+LDP+V EA LYE+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N D RA+E
Sbjct: 52 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 111
Query: 535 LNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
LN+T + GK RIM+S RDP++RK+G N+FIKNLD IDNKALHDTF
Sbjct: 112 LNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTF 159
Score = 54.7 bits (130), Expect = 4e-07
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++Y+ ++DP+V E + ++F G++ S + RD K S G+ +VNYS A A++
Sbjct: 233 NIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGK-SRGFGFVNYSTHESAQAAVDE 291
Query: 535 LNFTEVNGKLM---RIMYSH-RDPSIRKSGAA------------NIFIKNLDKDIDNKAL 666
++ EV + + R H R+ +RK A N+++KNL D+D++ L
Sbjct: 292 MHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKL 351
Query: 667 HDTF 678
+ F
Sbjct: 352 RELF 355
Score = 49.3 bits (116), Expect = 2e-05
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD ++ L++ F + G +LS +V +D S GY +V+Y A A++
Sbjct: 140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKH 198
Query: 535 LNFTEVNGKLMRIMY--SHRDPSIR----KSGAANIFIKNLDKDIDNKALHDTF 678
+N +N K + + + S +D + K+ NI+IKN+D D+ + F
Sbjct: 199 VNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIF 252
>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1
Length = 764
Score = 155 bits (393), Expect = 1e-37
Identities = 73/116 (62%), Positives = 92/116 (79%)
Frame = +1
Query: 331 APSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIP 510
AP P + SLYVG+LDP+V EA L+E+F+ +G V SIRVCRD +T+RSLGYAYVNY+
Sbjct: 53 APHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTA 112
Query: 511 DATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
D +A+E LN+T + G+ RIM+S RDP++RK+GA NIFIKNLD IDNKALHDTF
Sbjct: 113 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTF 168
Score = 48.9 bits (115), Expect = 2e-05
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 16/124 (12%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++YV +++ V + + E+F G+V S + RD K S G+ +VN++ A +A++
Sbjct: 242 NVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGK-SRGFGFVNFTTHEAAAQAVDE 300
Query: 535 LNFTEVNGK---LMRIMYSH-RDPSIRKSGAA------------NIFIKNLDKDIDNKAL 666
LN + G+ + R H R+ +RKS A N++IKNL D+D+ L
Sbjct: 301 LNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKL 360
Query: 667 HDTF 678
F
Sbjct: 361 RAMF 364
Score = 46.6 bits (109), Expect = 1e-04
Identities = 28/125 (22%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
PA ++++ +LD ++ L++ F + G +LS +V +D S GY +V+Y
Sbjct: 140 PALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDE-HGNSKGYGFVHYETD 198
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSI--------RKSGAANIFIKNLDKDIDNKA 663
A++A++ +N +N K ++ H P K+ N+++KN++ ++ ++
Sbjct: 199 EAASQAIKHVNGMLLNEK--KVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDEE 256
Query: 664 LHDTF 678
+ F
Sbjct: 257 FRELF 261
Score = 35.8 bits (81), Expect = 0.22
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 40/129 (31%)
Frame = +1
Query: 343 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTK------------------ 468
Y +LY+ +L +V++ +L +F+ G + S +V RD L +
Sbjct: 341 YQGVNLYIKNLGDDVDDDKLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGET 400
Query: 469 ----------------------RSLGYAYVNYSNIPDATRAMEVLNFTEVNGKLMRIMYS 582
+S G+ +V +SN DAT+A+ +N V+GK + + +
Sbjct: 401 KEEEQNEGSEKKTEKKGDRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALA 460
Query: 583 HRDPSIRKS 609
R +RKS
Sbjct: 461 QR-KDVRKS 468
>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1
Length = 768
Score = 155 bits (392), Expect = 2e-37
Identities = 74/117 (63%), Positives = 93/117 (79%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
P P+ SLYVG+LDP+V EA L+E+F+S+GQV SIRVCRD +T+RSLGYAYVNY+N
Sbjct: 48 PTAQPHSA-SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 106
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
D RA+E LN+T + G+ RIM+S RDP++RK+G N+FIKNLD IDNKALHDTF
Sbjct: 107 ADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Score = 58.9 bits (141), Expect = 2e-08
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++YV ++D + E + ++F G++ S + RD + +S G+ +VN+++ +A A+E
Sbjct: 237 NVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEA 296
Query: 535 LNFTEVNGKLM---RIMYSH-RDPSIRKSGAA------------NIFIKNLDKDIDNKAL 666
LN + G+ + R H R+ +RK A N++IKNL DID++ L
Sbjct: 297 LNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKL 356
Query: 667 HDTF 678
+ F
Sbjct: 357 RELF 360
Score = 48.9 bits (115), Expect = 2e-05
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD ++ L++ F + G +LS +V +D S GY +V+Y A A++
Sbjct: 144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKH 202
Query: 535 LNFTEVNGKLMRIMY--SHRDPSIR----KSGAANIFIKNLDKDIDNKALHDTF 678
+N +N K + + + + +D + K+ N+++KN+D+D + D F
Sbjct: 203 VNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLF 256
Score = 33.1 bits (74), Expect = 1.4
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 325 IPAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRD 456
I S Y +LY+ +L ++++ +L E+F+S G + S +V RD
Sbjct: 331 IEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTITSAKVMRD 374
>sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenopus
laevis GN=pabpc1-B PE=2 SV=1
Length = 633
Score = 155 bits (391), Expect = 2e-37
Identities = 74/117 (63%), Positives = 90/117 (76%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
P+ Y SLYVGDL P+V EA LYE F+ G +LSIRVCRD++T+RSLGYAYVN+
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
DA RA++ +NF + GK +RIM+S RDPS+RKSG NIFIKNLDK IDNKAL+DTF
Sbjct: 63 ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF 119
Score = 50.4 bits (119), Expect = 8e-06
Identities = 30/114 (26%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD +++ LY+ F++ G +LS +V D S GY +V++ A RA++
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIDK 157
Query: 535 LNFTEVNGKLMRI-MYSHRDPSIRKSGA-----ANIFIKNLDKDIDNKALHDTF 678
+N +N + + + + R + GA N++IKN +D+D++ L + F
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWF 211
>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus
norvegicus GN=Pabpc1 PE=2 SV=1
Length = 636
Score = 155 bits (391), Expect = 2e-37
Identities = 74/117 (63%), Positives = 90/117 (76%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
P+ Y SLYVGDL P+V EA LYE F+ G +LSIRVCRD++T+RSLGYAYVN+
Sbjct: 3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
DA RA++ +NF + GK +RIM+S RDPS+RKSG NIFIKNLDK IDNKAL+DTF
Sbjct: 63 ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF 119
Score = 52.0 bits (123), Expect = 3e-06
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD +++ LY+ F++ G +LS +V D S GY +V++ A RA+E
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEK 157
Query: 535 LNFTEVNGKLMRI-MYSHRDPSIRKSGA-----ANIFIKNLDKDIDNKALHDTF 678
+N +N + + + + R + GA N++IKN +D+D++ L + F
Sbjct: 158 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELF 211
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961004|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_P04, 5'
(680 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella paten... 193 7e-48
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten... 187 5e-46
tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten... 187 5e-46
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten... 184 3e-45
tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia ph... 183 1e-44
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos... 174 5e-42
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos... 172 1e-41
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu... 171 5e-41
tr|A5C1F3|A5C1F3_VITVI Putative uncharacterized protein OS=Vitis... 169 2e-40
tr|B7FM14|B7FM14_MEDTR Putative uncharacterized protein (Fragmen... 167 7e-40
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs... 166 1e-39
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza... 166 1e-39
tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subs... 164 6e-39
tr|Q6UUN6|Q6UUN6_ORYSJ Putative poly(A)-binding protein (Putativ... 164 6e-39
tr|A2YTU1|A2YTU1_ORYSI Putative uncharacterized protein OS=Oryza... 164 6e-39
tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aesti... 162 2e-38
tr|O64985|O64985_CHLRE Poly(A) binding protein RB47 OS=Chlamydom... 162 2e-38
tr|A8HME6|A8HME6_CHLRE Polyadenylate-binding protein RB47 OS=Chl... 162 2e-38
tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana taba... 160 7e-38
tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome... 160 7e-38
tr|Q7RDM4|Q7RDM4_PLAYO PolyA binding protein-related OS=Plasmodi... 160 7e-38
tr|Q4Z2X5|Q4Z2X5_PLABE Polyadenylate-binding protein, putative O... 160 7e-38
tr|Q4Y7Z4|Q4Y7Z4_PLACH Polyadenylate-binding protein, putative (... 160 7e-38
tr|B0XND2|B0XND2_ASPFC Polyadenylate-binding protein OS=Aspergil... 159 2e-37
tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea ma... 158 3e-37
tr|B3LCN2|B3LCN2_PLAKH Polyadenylate-binding protein, putative O... 158 3e-37
tr|A5K043|A5K043_PLAVI Polyadenylate-binding protein, putative O... 158 3e-37
tr|B8N3I8|B8N3I8_ASPFL Polyadenylate-binding protein OS=Aspergil... 158 3e-37
tr|B3S125|B3S125_TRIAD Putative uncharacterized protein OS=Trich... 157 5e-37
tr|B6H844|B6H844_PENCH Pc16g09030 protein OS=Penicillium chrysog... 157 5e-37
>tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124737 PE=4 SV=1
Length = 439
Score = 193 bits (491), Expect = 7e-48
Identities = 91/117 (77%), Positives = 108/117 (92%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
PAP+ +++ SLYVGDL+PNV+EAQLYE+F+ VGQV+SIRVCRDL+T+RSLGY+YVNY+N
Sbjct: 16 PAPTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNA 75
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
DATRA+E+LNFT VNGK +RIM+SHRDPSIRKSG ANIFIKNLDK IDNKALHDTF
Sbjct: 76 QDATRALELLNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTF 132
Score = 43.5 bits (101), Expect = 0.012
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +1
Query: 343 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 522
Y +LY+ +LD V++ ++ E+F G + S +V RD +S G +V +S+ +ATR
Sbjct: 303 YQGVNLYLKNLDDTVDDEKIRELFAEYGTITSCKVMRD-HQGQSKGSGFVAFSSPDEATR 361
Query: 523 AMEVLNFTEVNGKLM 567
A+ TE+NGK++
Sbjct: 362 AV-----TEMNGKMV 371
>tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_170712 PE=4 SV=1
Length = 650
Score = 187 bits (475), Expect = 5e-46
Identities = 88/117 (75%), Positives = 106/117 (90%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
P P+ +++ SLYVGDL+PNV+EAQLYE+FT VGQV+SIRVCRDL+T+RSLGYAYVNY++
Sbjct: 20 PPPAQFVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSA 79
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
DATRA+E+LNF+ +NG +RIM+SHRDPSIRKSG ANIFIKNLDK IDNKALHDTF
Sbjct: 80 QDATRALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKALHDTF 136
Score = 44.3 bits (103), Expect = 0.007
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = +1
Query: 343 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 522
Y +LY+ +LD V++ +L E+F G + S +V RD +S G +V +S+ +ATR
Sbjct: 307 YQGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRD-PQGQSRGSGFVAFSSPEEATR 365
Query: 523 AMEVLNFTEVNGKLM 567
A+ TE+NGK++
Sbjct: 366 AV-----TEMNGKMV 375
>tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_216291 PE=4 SV=1
Length = 645
Score = 187 bits (475), Expect = 5e-46
Identities = 89/117 (76%), Positives = 104/117 (88%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
PAP +++ SLYVGDL+ V+EAQLYE+F+ VGQV+SIRVCRDL+T+RSLGYAYVNY+N
Sbjct: 16 PAPPNFVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNA 75
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
DATRA+E+LNF VNGK +RIM+SHRDPSIRKSG ANIFIKNLDK IDNKALHDTF
Sbjct: 76 QDATRALELLNFNAVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTF 132
Score = 45.8 bits (107), Expect = 0.002
Identities = 26/75 (34%), Positives = 47/75 (62%)
Frame = +1
Query: 343 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 522
Y +LY+ +LD +++ +L E+F+ G ++S +V RD +S G +V +S+ +ATR
Sbjct: 303 YQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRD-PQGQSRGSGFVAFSSPDEATR 361
Query: 523 AMEVLNFTEVNGKLM 567
A+ TE+NGK++
Sbjct: 362 AV-----TEMNGKMV 371
>tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108547 PE=4 SV=1
Length = 647
Score = 184 bits (468), Expect = 3e-45
Identities = 87/117 (74%), Positives = 105/117 (89%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
PAP+ +++ S+YVGDL+ NV+EAQLYE+F+ G V+SIRVCRDL+T+RSLGYAYVNY +
Sbjct: 16 PAPNQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSA 75
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
DATRA+E+LNFT VNGK +RIM+SHRDPS+RKSGAANIFIKNLDK IDNKALHDTF
Sbjct: 76 QDATRALELLNFTPVNGKPIRIMFSHRDPSLRKSGAANIFIKNLDKAIDNKALHDTF 132
Score = 41.2 bits (95), Expect = 0.062
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +1
Query: 343 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 522
Y +LY+ +LD V++ +L E+F G + S +V +D +S G +V +S +ATR
Sbjct: 303 YQGVNLYLKNLDDAVDDEKLRELFAEYGTITSCKVMKD-PQGQSRGSGFVAFSTPEEATR 361
Query: 523 AMEVLNFTEVNGKLMRIMYSHR 588
A+ +N V K + + + R
Sbjct: 362 AVTEMNTKMVGSKPLYVALAQR 383
>tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia
phyllitidis PE=2 SV=1
Length = 638
Score = 183 bits (464), Expect = 1e-44
Identities = 88/118 (74%), Positives = 103/118 (87%)
Frame = +1
Query: 325 IPAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSN 504
I SPY+ SLYVGDLDP+V+E++LYEVF +GQV+SIRVCRDL+TK+SLGYAYVNY
Sbjct: 17 ISGSSPYVAPSLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGT 76
Query: 505 IPDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
DA++A+E+LNFT V GK +RIMYSHRDPSIRKSGAANIFIKNL+K IDNKALHDTF
Sbjct: 77 HQDASQALELLNFTLVKGKPIRIMYSHRDPSIRKSGAANIFIKNLEKSIDNKALHDTF 134
Score = 35.0 bits (79), Expect = 4.4
Identities = 20/78 (25%), Positives = 43/78 (55%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
+LY+ ++D ++++ +L E+F G V S +V + +S+G +V +S +A +A+
Sbjct: 308 NLYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKS-PQGQSMGSGFVTFSAPEEAMQAVND 366
Query: 535 LNFTEVNGKLMRIMYSHR 588
+N V K + + + R
Sbjct: 367 MNGKMVGSKPLYVALAQR 384
>tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_1, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00014861001 PE=4 SV=1
Length = 640
Score = 174 bits (441), Expect = 5e-42
Identities = 83/110 (75%), Positives = 95/110 (86%)
Frame = +1
Query: 349 TNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAM 528
T SLYVGDLD N+ ++QLY++F GQVLS+RVCRDL T+RSLGY YVNYSN DA RA+
Sbjct: 17 TASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARAL 76
Query: 529 EVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
++LNFT +NGK +RIMYSHRDPSIRKSG ANIFIKNLDK IDNKALHDTF
Sbjct: 77 DLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTF 126
Score = 53.9 bits (128), Expect = 9e-06
Identities = 28/114 (24%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Frame = +1
Query: 349 TNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAM 528
T ++++ +LD +++ L++ F++ G +LS ++ D + +S GY +V + N A A+
Sbjct: 105 TANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDP-SGQSKGYGFVQFDNEESAQNAI 163
Query: 529 EVLNFTEVNGKLMRI----MYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
+ LN +N K + + R+ ++ K+ N+++KNL + + L + F
Sbjct: 164 DKLNGMLINDKQVYVGQFLRKQERETALNKTKFNNVYVKNLSESTTEEDLKNIF 217
Score = 45.1 bits (105), Expect = 0.004
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Frame = +1
Query: 352 NSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAME 531
N++YV +L + E L +F G + S+ V RD K S + +VN+ N DA A+E
Sbjct: 197 NNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGK-SKCFGFVNFENADDAAEAVE 255
Query: 532 VLNFTEVNGKLMRIMYSHRDPS----------------IRKSGAANIFIKNLDKDIDNKA 663
LN + + K + + + + K N++IKNLD I +
Sbjct: 256 ALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLDDSIGDDK 315
Query: 664 LHDTF 678
L + F
Sbjct: 316 LKELF 320
Score = 42.0 bits (97), Expect = 0.036
Identities = 24/71 (33%), Positives = 44/71 (61%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
+LY+ +LD ++ + +L E+F+ G + S +V RD + S G +V +S +A+RA+
Sbjct: 301 NLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRD-PSGISRGSGFVAFSTSEEASRAL-- 357
Query: 535 LNFTEVNGKLM 567
TE+NGK++
Sbjct: 358 ---TEMNGKMV 365
>tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromosome
chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis
vinifera GN=GSVIVT00036627001 PE=4 SV=1
Length = 648
Score = 172 bits (437), Expect = 1e-41
Identities = 84/127 (66%), Positives = 102/127 (80%), Gaps = 10/127 (7%)
Frame = +1
Query: 328 PAPSP----------YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSL 477
P P+P ++T SLYVGDL+ NVN++QLY++F+ +G V+S+RVCRDL T+RSL
Sbjct: 12 PGPAPNGAAGAGGNQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSL 71
Query: 478 GYAYVNYSNIPDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDN 657
GY YVNYSN DA RA++VLNFT +NGK +RIMYSHRDPSIRKSG NIFIKNLDK ID+
Sbjct: 72 GYGYVNYSNPQDAARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDH 131
Query: 658 KALHDTF 678
KALHDTF
Sbjct: 132 KALHDTF 138
Score = 49.3 bits (116), Expect = 2e-04
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Frame = +1
Query: 349 TNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAM 528
T ++++ +LD ++ L++ F++ G +LS +V D + S G+ +V + + A +A+
Sbjct: 117 TGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDA-SGMSKGHGFVQFDSEEAAQKAI 175
Query: 529 EVLNFTEVNGKLMRI----MYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
+ LN +N K + + R+ +I K N+F+KN+ + + + L F
Sbjct: 176 DKLNGMLLNDKQVFVGPFVRKQERESTINKEKFNNVFVKNISEGMTEEDLTRIF 229
Score = 47.4 bits (111), Expect = 9e-04
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Frame = +1
Query: 352 NSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAME 531
N+++V ++ + E L +F G + S+ V RD K S + +VN+ N+ DA ++E
Sbjct: 209 NNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGK-SKCFGFVNFENVDDAAMSVE 267
Query: 532 VLNFTEVNGK----------------LMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKA 663
LN + + K L + ++ K AN++IKNLD I +
Sbjct: 268 ALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLDDSIGDDK 327
Query: 664 LHDTF 678
L + F
Sbjct: 328 LKELF 332
Score = 39.7 bits (91), Expect = 0.18
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
+LY+ +LD ++ + +L E+F G + S +V RD S G +V +S+ +A+RA+
Sbjct: 313 NLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRD-PNGLSRGSGFVAFSSPEEASRALAE 371
Query: 535 LNFTEVNGKLMRIMYSHR 588
+N V K + + + R
Sbjct: 372 MNSKMVVSKPLYVALAQR 389
>tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativus
PE=2 SV=1
Length = 649
Score = 171 bits (432), Expect = 5e-41
Identities = 79/112 (70%), Positives = 98/112 (87%)
Frame = +1
Query: 343 YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATR 522
++T SLYVGDLD NV ++QLY++F VGQV+S+RVCRDL ++RSLGY YVNYSN DA+R
Sbjct: 26 HVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASR 85
Query: 523 AMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
A++VLNFT +NG +R+MYSHRDPS+RKSG+ NIFIKNLDK ID+KALHDTF
Sbjct: 86 ALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTF 137
Score = 55.1 bits (131), Expect = 4e-06
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 16/125 (12%)
Frame = +1
Query: 352 NSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAME 531
N+++V +L +E L +F G + S+ V RD K S + +VN+ N DA R++E
Sbjct: 208 NNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGK-SKCFGFVNFENADDAARSVE 266
Query: 532 VLNFTEVNGKLMRI------------MYSHRDPSIRKSG----AANIFIKNLDKDIDNKA 663
LN +V+GK + + S + S++++ AN+++KNLD ID+
Sbjct: 267 ALNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLDDSIDDDK 326
Query: 664 LHDTF 678
L + F
Sbjct: 327 LKELF 331
Score = 42.7 bits (99), Expect = 0.021
Identities = 26/86 (30%), Positives = 46/86 (53%)
Frame = +1
Query: 331 APSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIP 510
A Y +LYV +LD ++++ +L E+FT G + S +V RD S G +V +S+
Sbjct: 304 AADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRD-PNGISRGSGFVAFSSPE 362
Query: 511 DATRAMEVLNFTEVNGKLMRIMYSHR 588
+A RA+ +N + K + + + R
Sbjct: 363 EAARALAEMNGRMIVSKPLYVALAQR 388
>tr|A5C1F3|A5C1F3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_011270 PE=4 SV=1
Length = 185
Score = 169 bits (427), Expect = 2e-40
Identities = 83/127 (65%), Positives = 99/127 (77%), Gaps = 10/127 (7%)
Frame = +1
Query: 328 PAPSP----------YMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSL 477
P P+P ++T SLYVGDL+ NVN+ QLY++F +G V+S+RVCRDL T+RSL
Sbjct: 12 PGPAPNSAAGAGGNQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSL 71
Query: 478 GYAYVNYSNIPDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDN 657
GY YVNYSN DA RA++VLNFT +NGK +RIMYSH DPSIRKSG NIFIKNLDK ID+
Sbjct: 72 GYGYVNYSNPQDAARALDVLNFTPLNGKPLRIMYSHCDPSIRKSGTGNIFIKNLDKGIDH 131
Query: 658 KALHDTF 678
KALHDTF
Sbjct: 132 KALHDTF 138
>tr|B7FM14|B7FM14_MEDTR Putative uncharacterized protein (Fragment)
OS=Medicago truncatula PE=2 SV=1
Length = 494
Score = 167 bits (422), Expect = 7e-40
Identities = 77/117 (65%), Positives = 99/117 (84%)
Frame = +1
Query: 328 PAPSPYMTNSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNI 507
P P+ T SLYVGDLD +V ++QLY++F +GQV+S+R+CRDL +++SLGY YVN+SN
Sbjct: 16 PVPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNP 75
Query: 508 PDATRAMEVLNFTEVNGKLMRIMYSHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
DA +AM+VLNFT +N K +RIMYSHRDPS+RKSGAANIFIKNLD+ ID+KAL+DTF
Sbjct: 76 HDAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTF 132
Score = 52.8 bits (125), Expect = 2e-05
Identities = 29/112 (25%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
++++ +LD ++ LY+ F+ G +LS ++ D + S GY +V + N A A++
Sbjct: 113 NIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDA-SGLSKGYGFVQFENEESAQSAIDK 171
Query: 535 LNFTEVNGKLMRIMY----SHRDPSIRKSGAANIFIKNLDKDIDNKALHDTF 678
LN +N K + + + RD ++ + N+++KNL + + + L +TF
Sbjct: 172 LNGMLLNDKPVYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNTF 223
Score = 44.3 bits (103), Expect = 0.007
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Frame = +1
Query: 352 NSLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAME 531
N++YV +L +V + L F G + S V RD + +S + +VN+ N A A+E
Sbjct: 203 NNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRD-VDGKSKCFGFVNFENADAAAEAVE 261
Query: 532 VLNFTEVNGK-------------LMRIMYSHRD---PSIRKSGAANIFIKNLDKDIDNKA 663
LN + + K + + H ++ K AN+++KNLD + ++
Sbjct: 262 ALNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEK 321
Query: 664 LHDTF 678
L + F
Sbjct: 322 LSELF 326
Score = 41.2 bits (95), Expect = 0.062
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +1
Query: 355 SLYVGDLDPNVNEAQLYEVFTSVGQVLSIRVCRDLLTKRSLGYAYVNYSNIPDATRAMEV 534
+LY+ +LD +V + +L E+F+ G V S ++ RD S G +V +S +ATRA+
Sbjct: 307 NLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRD-PQGISRGSGFVAFSTPEEATRALAE 365
Query: 535 LNFTEVNGK 561
+N V GK
Sbjct: 366 MNGKMVAGK 374
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