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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961014
Clone id TST39A01NGRL0008_P14
Library
Length 679
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_P14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGAGAGGCGGGGACACAGAGAGAGAGAGAAGAGAAGGAGGAGAAGAAGTAGAAGAAGAGG
AAAGAAGAGAAATTTTAACGTCCTAGAAACAGTCTCAATAGACAGATGGCGATGGCGCAT
TCTTTGGGAGTGTTATCAGCATCGGCTACAAGGCCTCACAACGCTTTGAGCCACAACACT
CATTCGGAGTTGGCCTCTCTTAAGTTCTCCCCTCTCCTCTCTCTTTCCGCCAGGTCCCGC
TCTTCCTGTAAACGGCCTTTCTGCTTGACCAAAACTGTGCGATCGCAAGATGAGGCAGAA
CAGATGAAGGAAATGGCTGCCGCCGAGAAACGTTGGCGTGCTCAAGTACGGGAGGGAAAA
ATACAATCCATTTCACCAAAGCAAGCAGGCTATGCTGCACAACTCTCTGATTACCGTATT
CTTGATGTGCGACCATCCACAGAGAGAAACAAGGCTTGGGTCAAAGAATCAATATGGATT
CCACTTTTCGATGTTGACAATGGACTTGGACCAGAGACTATATTGAAGAAGTTTTCAAAT
TTCACCATGGGAGGATGGTGGAGTGGTGCTCCTTTGATGAAATTTAACAACCAGTTTCTG
CCTCAGGCAACTGAAAAAATATCTTTAGACTCCAAAGTCATTGTTTTGTGCCAAAAGGGC
TTGAGGTCTCTTGCAGCAT
■■Homology search results ■■ -
sp_hit_id P25908
Definition sp|P25908|YPSL_SYNEN Uncharacterized 16.5 kDa protein in psaL 5'region OS=Synechococcus elongatus naegeli
Align length 38
Score (bit) 32.0
E-value 3.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961014|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_P14, 5'
         (679 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P25908|YPSL_SYNEN Uncharacterized 16.5 kDa protein in psaL 5'...    32   3.1  
sp|P0C1E9|YPRB2_CORML Uncharacterized protein in proB 3'region O...    30   9.1  
sp|P0C1E8|Y2355_CORGL Uncharacterized protein Cgl2355/cg2587 OS=...    30   9.1  

>sp|P25908|YPSL_SYNEN Uncharacterized 16.5 kDa protein in psaL
           5'region OS=Synechococcus elongatus naegeli PE=4 SV=1
          Length = 150

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 409 DYRILDVRPSTERNKAWVKESIWIPLFDVDNGLGPETI 522
           DY ++DVR   E   A +  S+ +PL +++NG G E I
Sbjct: 22  DYVLVDVRNPNEYEIARIPGSVLVPLSEIENGPGVEKI 59


>sp|P0C1E9|YPRB2_CORML Uncharacterized protein in proB 3'region
           OS=Corynebacterium melassecola PE=3 SV=1
          Length = 304

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +1

Query: 427 VRPSTERNKAWVKESIWIPLFDVDNGLGPETI--LKKFSNFTMGGWWSGAPLMKFNNQFL 600
           VRP  E NK+W+ ++  + +     G+G   +  LK F+  T+    SG P+   +  F 
Sbjct: 112 VRPEVENNKSWLHDNKTVAILGA-GGIGVRLLEMLKPFNVKTIAVNNSGRPVEGADETFA 170

Query: 601 PQATEKISLDSKVIVL 648
               E +  ++ V VL
Sbjct: 171 MDKAEHVWAEADVFVL 186


>sp|P0C1E8|Y2355_CORGL Uncharacterized protein Cgl2355/cg2587
           OS=Corynebacterium glutamicum GN=Cgl2355 PE=3 SV=1
          Length = 304

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +1

Query: 427 VRPSTERNKAWVKESIWIPLFDVDNGLGPETI--LKKFSNFTMGGWWSGAPLMKFNNQFL 600
           VRP  E NK+W+ ++  + +     G+G   +  LK F+  T+    SG P+   +  F 
Sbjct: 112 VRPEVENNKSWLHDNKTVAILGA-GGIGVRLLEMLKPFNVKTIAVNNSGRPVEGADETFA 170

Query: 601 PQATEKISLDSKVIVL 648
               E +  ++ V VL
Sbjct: 171 MDKAEHVWAEADVFVL 186
tr_hit_id A9RKM5
Definition tr|A9RKM5|A9RKM5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 116
Score (bit) 150.0
E-value 9.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961014|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_P14, 5'
         (679 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RKM5|A9RKM5_PHYPA Predicted protein OS=Physcomitrella paten...   150   9e-35
tr|Q501G8|Q501G8_ARATH At4g24750 OS=Arabidopsis thaliana PE=2 SV=1    147   8e-34
tr|Q0WWT7|Q0WWT7_ARATH Putative uncharacterized protein At4g2475...   147   8e-34
tr|A7PCP1|A7PCP1_VITVI Chromosome chr17 scaffold_12, whole genom...   145   3e-33
tr|Q6ZI49|Q6ZI49_ORYSJ Os02g0596000 protein OS=Oryza sativa subs...   139   2e-31
tr|B8AER2|B8AER2_ORYSI Putative uncharacterized protein OS=Oryza...   139   2e-31
tr|A9T240|A9T240_PHYPA Predicted protein (Fragment) OS=Physcomit...   132   3e-29
tr|Q9SB69|Q9SB69_ARATH Putative uncharacterized protein AT4g2475...   115   3e-24
tr|A3A8M6|A3A8M6_ORYSJ Putative uncharacterized protein OS=Oryza...   110   8e-23
tr|B4G1T0|B4G1T0_MAIZE Putative uncharacterized protein OS=Zea m...    92   3e-17
tr|Q9SR92|Q9SR92_ARATH T16O11.14 protein (Putative rhodanese fam...    86   2e-15
tr|Q8RY72|Q8RY72_ARATH Putative rhodanese family protein (Fragme...    86   2e-15
tr|Q8LBR6|Q8LBR6_ARATH Rhodanese-like family protein OS=Arabidop...    86   2e-15
tr|Q10MY4|Q10MY4_ORYSJ Os03g0289400 protein OS=Oryza sativa subs...    81   7e-14
tr|A9TJL4|A9TJL4_PHYPA Predicted protein OS=Physcomitrella paten...    78   6e-13
tr|A7QHR3|A7QHR3_VITVI Chromosome chr8 scaffold_99, whole genome...    74   1e-11
tr|A5B641|A5B641_VITVI Putative uncharacterized protein OS=Vitis...    72   2e-11
tr|A2XFF7|A2XFF7_ORYSI Putative uncharacterized protein OS=Oryza...    71   7e-11
tr|A9NS64|A9NS64_PICSI Putative uncharacterized protein OS=Picea...    70   1e-10
tr|A9SZ80|A9SZ80_PHYPA Predicted protein (Fragment) OS=Physcomit...    70   2e-10
tr|A7KNZ8|A7KNZ8_GOSBA Rhodanese-like family protein-like protei...    68   5e-10
tr|B6SNU6|B6SNU6_MAIZE Rhodanese family protein OS=Zea mays PE=2...    66   2e-09
tr|Q94AY4|Q94AY4_ARATH At2g42220/T24P15.13 (Fragment) OS=Arabido...    65   3e-09
tr|O48529|O48529_ARATH Rhodanese-like family protein OS=Arabidop...    65   3e-09
tr|Q6H444|Q6H444_ORYSJ Os09g0279400 protein OS=Oryza sativa subs...    65   4e-09
tr|A3BWU3|A3BWU3_ORYSJ Putative uncharacterized protein OS=Oryza...    65   4e-09
tr|A2YZA3|A2YZA3_ORYSI Putative uncharacterized protein OS=Oryza...    65   5e-09
tr|A7PVU0|A7PVU0_VITVI Chromosome chr8 scaffold_34, whole genome...    63   2e-08
tr|B7FN62|B7FN62_MEDTR Putative uncharacterized protein OS=Medic...    59   3e-07
tr|A2Q4U4|A2Q4U4_MEDTR Rhodanese-like OS=Medicago truncatula GN=...    59   3e-07

>tr|A9RKM5|A9RKM5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175931 PE=4 SV=1
          Length = 302

 Score =  150 bits (378), Expect = 9e-35
 Identities = 67/116 (57%), Positives = 88/116 (75%)
 Frame = +1

Query: 331 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 510
           RW  QV+EGK++ +S K+AGYA QL+DY  LDVRPS E ++  VK+SI IP++DVD  + 
Sbjct: 89  RWEQQVKEGKVKQLSAKEAGYAMQLNDYTFLDVRPSNEHSRVSVKDSIHIPIYDVDQSVD 148

Query: 511 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIVLCQKGLRSLAA 678
           P ++ KKFSNFTMGGWW+G P+MK+N +F+P    KI   + +IV CQKGLRSLAA
Sbjct: 149 PASLSKKFSNFTMGGWWNGLPVMKYNERFMPDVVAKIPKTANIIVGCQKGLRSLAA 204


>tr|Q501G8|Q501G8_ARATH At4g24750 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 266

 Score =  147 bits (370), Expect = 8e-34
 Identities = 66/116 (56%), Positives = 87/116 (75%)
 Frame = +1

Query: 331 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 510
           RW   +REGK++ ++P++AGYA  LS+  +LDVRPS+ERNKAW+K S W+P+FD D+ L 
Sbjct: 52  RWDGLLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLD 111

Query: 511 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIVLCQKGLRSLAA 678
             T+ KK ++F MGGWWSGAP + FN  FL +  EK   DS++IV CQKGLRSLAA
Sbjct: 112 AGTLSKKVTSFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIVACQKGLRSLAA 167


>tr|Q0WWT7|Q0WWT7_ARATH Putative uncharacterized protein At4g24750
           (At4g24750) OS=Arabidopsis thaliana GN=At4g24750 PE=2
           SV=1
          Length = 292

 Score =  147 bits (370), Expect = 8e-34
 Identities = 66/116 (56%), Positives = 87/116 (75%)
 Frame = +1

Query: 331 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 510
           RW   +REGK++ ++P++AGYA  LS+  +LDVRPS+ERNKAW+K S W+P+FD D+ L 
Sbjct: 78  RWDGLLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLD 137

Query: 511 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIVLCQKGLRSLAA 678
             T+ KK ++F MGGWWSGAP + FN  FL +  EK   DS++IV CQKGLRSLAA
Sbjct: 138 AGTLSKKVTSFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIVACQKGLRSLAA 193


>tr|A7PCP1|A7PCP1_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015945001
           PE=4 SV=1
          Length = 286

 Score =  145 bits (365), Expect = 3e-33
 Identities = 65/116 (56%), Positives = 87/116 (75%)
 Frame = +1

Query: 331 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 510
           RW A +RE K++ +SP++AGYA QLS+  +LDVRPSTER KAWVK S WIP+F+VD+   
Sbjct: 72  RWEALIREEKVKILSPREAGYAIQLSNKTLLDVRPSTERKKAWVKGSTWIPIFEVDDRFD 131

Query: 511 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIVLCQKGLRSLAA 678
             T+ +K +NF MGGWWSG P + +++QFL +  +K   D+ +IV CQKGLRSLAA
Sbjct: 132 VGTLSRKITNFMMGGWWSGVPALSYDSQFLTKVEQKFPKDTDLIVACQKGLRSLAA 187


>tr|Q6ZI49|Q6ZI49_ORYSJ Os02g0596000 protein OS=Oryza sativa subsp.
           japonica GN=OJ1126_D09.34 PE=2 SV=1
          Length = 292

 Score =  139 bits (349), Expect = 2e-31
 Identities = 64/116 (55%), Positives = 82/116 (70%)
 Frame = +1

Query: 331 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 510
           RW   +RE KI++++P++AGY  +L+D  +LDVRPS ER KAWVK S WIP+FDVD    
Sbjct: 78  RWETLIREQKIKTLTPREAGYTFKLTDKVLLDVRPSNERQKAWVKGSTWIPVFDVDTSFD 137

Query: 511 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIVLCQKGLRSLAA 678
                KKF+N+ MGGWWSG+  M  N  F+ Q  EK S D+ +IV+CQKGLRSLAA
Sbjct: 138 LGGAGKKFTNYVMGGWWSGSSTMTVNKNFVQQVEEKFSKDTDIIVVCQKGLRSLAA 193


>tr|B8AER2|B8AER2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07903 PE=4 SV=1
          Length = 292

 Score =  139 bits (349), Expect = 2e-31
 Identities = 64/116 (55%), Positives = 82/116 (70%)
 Frame = +1

Query: 331 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 510
           RW   +RE KI++++P++AGY  +L+D  +LDVRPS ER KAWVK S WIP+FDVD    
Sbjct: 78  RWETLIREQKIKTLTPREAGYTFKLTDKVLLDVRPSNERQKAWVKGSTWIPVFDVDTSFD 137

Query: 511 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIVLCQKGLRSLAA 678
                KKF+N+ MGGWWSG+  M  N  F+ Q  EK S D+ +IV+CQKGLRSLAA
Sbjct: 138 LGGAGKKFTNYVMGGWWSGSSTMTVNKNFVQQVEEKFSKDTDIIVVCQKGLRSLAA 193


>tr|A9T240|A9T240_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_139049 PE=4 SV=1
          Length = 209

 Score =  132 bits (331), Expect = 3e-29
 Identities = 60/111 (54%), Positives = 79/111 (71%)
 Frame = +1

Query: 346 VREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLGPETIL 525
           V++G+++S+SPK+AG+A +  +Y  LDVRPS ER KA VK S WIP++DV+    P T+ 
Sbjct: 1   VKDGRVKSMSPKEAGFAVKSGEYTFLDVRPSNERAKASVKNSTWIPMYDVNKHGDPGTLY 60

Query: 526 KKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIVLCQKGLRSLAA 678
           KK  N  MGGWWSG  LMK+N +F+P     I   +KV+V CQKGLRSLAA
Sbjct: 61  KKVQNLAMGGWWSGQALMKYNERFMPDVVATIPKSAKVVVACQKGLRSLAA 111


>tr|Q9SB69|Q9SB69_ARATH Putative uncharacterized protein AT4g24750
           OS=Arabidopsis thaliana GN=F22K18.50 PE=2 SV=1
          Length = 260

 Score =  115 bits (287), Expect = 3e-24
 Identities = 48/86 (55%), Positives = 66/86 (76%)
 Frame = +1

Query: 331 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 510
           RW   +REGK++ ++P++AGYA  LS+  +LDVRPS+ERNKAW+K S W+P+FD D+ L 
Sbjct: 78  RWDGLLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLD 137

Query: 511 PETILKKFSNFTMGGWWSGAPLMKFN 588
             T+ KK ++F MGGWWSGAP + FN
Sbjct: 138 AGTLSKKVTSFAMGGWWSGAPTLSFN 163


>tr|A3A8M6|A3A8M6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_007148 PE=4 SV=1
          Length = 267

 Score =  110 bits (275), Expect = 8e-23
 Identities = 56/116 (48%), Positives = 74/116 (63%)
 Frame = +1

Query: 331 RWRAQVREGKIQSISPKQAGYAAQLSDYRILDVRPSTERNKAWVKESIWIPLFDVDNGLG 510
           RW   +RE KI++++P++AGY  +L+D  +LDVRPS ER KAWVK S WIP+FDVD    
Sbjct: 78  RWETLIREQKIKTLTPREAGYTFKLTDKVLLDVRPSNERQKAWVKGSTWIPVFDVDTSFD 137

Query: 511 PETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDSKVIVLCQKGLRSLAA 678
                KKF+N+ M          +    F+ Q  EK S D+ +IV+CQKGLRSLAA
Sbjct: 138 LGGAGKKFTNYVMD---------QIARNFVQQVEEKFSKDTDIIVVCQKGLRSLAA 184


>tr|B4G1T0|B4G1T0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 253

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 41/75 (54%), Positives = 52/75 (69%)
 Frame = +1

Query: 454 AWVKESIWIPLFDVDNGLGPETILKKFSNFTMGGWWSGAPLMKFNNQFLPQATEKISLDS 633
           AWVK S WIP+FDVD  +    + KK SNF MGGWWSG+  +  N  F+ Q  EK S D+
Sbjct: 80  AWVKGSTWIPIFDVDASVDLGGLSKKVSNFVMGGWWSGSSTLSLNKNFVQQVEEKFSKDT 139

Query: 634 KVIVLCQKGLRSLAA 678
            ++++CQKGLRSLAA
Sbjct: 140 DIMLVCQKGLRSLAA 154