| DK961016 |
| Clone id |
TST39A01NGRL0008_P16 |
| Library |
TST39 |
| Length |
673 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_P16. 5' end sequence. |
| Accession |
DK961016 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL3197Contig1 |
| Sequence |
CTCATGTGGCAGGAAGCAGACTCGACGCCATCGCCAGAGGCGGGCAGGGAGGGCCTTAGA
GAAAACAAAATACACGAAGAAGGAAAACGCAGTGGAAGAGCTAGAAGCAGTGGCGACCTT
ATAATCCGACGGCGAGATAGCGTGGACGGCGGACGGTCTGTTGCTGCTCGCTTTGCTTCC
CGTATGGCATCTCCTTCGAACATCTGGGTGCTTCTCGGTCTTGGCATTGCTGGTATCCTC
CTCCTCACTCGCTCTCGGAAAAAGCAAATCAGCAAAGATTTTGGCGCTTTCATAAAGTAC
CTGGAACTCCTCCCCCCTCCTCAGCCTGCTCCCCCCATTGCTCCCCATCCTCTCAGCAAT
CTCACGTTCGCTGTCAAGACATTTTTGATGTGGAAGGTTTCATTACTGGCTTTGGCAATC
CTGACTGGGAGAGGACTCATGAACCTGCTCTACGTACTGCCCCAGCTGTTGCATGTCTTG
TGCAAGCAGGAGCGACTTGTGTAGGCAAAACCCACATGGATGAAATGGCCTATTCATTGA
TAGGGGAAAATAAACACTATGGAACCCCTGTTAACCCAGCTGCGACTTCTAGAGTCCCAG
GTGGCTCTTCCAGTGGGTCTGCTGTTGCTGTTGCTGCAGGCTTGGTGGACTTTGCCCTTG
GTACAGATACAAG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q5P4D0 |
| Definition |
sp|Q5P4D0|GATA_AZOSE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain EbN1) |
| Align length |
99 |
| Score (bit) |
57.0 |
| E-value |
9.0e-08 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7PH66 |
| Definition |
tr|A7PH66|A7PH66_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
98 |
| Score (bit) |
132.0 |
| E-value |
3.0e-33 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961016|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0008_P16, 5'
(659 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7PH66|A7PH66_VITVI Chromosome chr17 scaffold_16, whole genom... 132 3e-33
tr|A9TS00|A9TS00_PHYPA Predicted protein OS=Physcomitrella paten... 144 6e-33
tr|Q6RJN7|Q6RJN7_PHYPA Chloroplast Toc64-1 OS=Physcomitrella pat... 141 3e-32
tr|A5AGK8|A5AGK8_VITVI Putative uncharacterized protein OS=Vitis... 126 2e-31
tr|Q6RJN6|Q6RJN6_PHYPA Chloroplast Toc64-2 OS=Physcomitrella pat... 138 3e-31
tr|A7PSC3|A7PSC3_VITVI Chromosome chr14 scaffold_27, whole genom... 133 1e-29
tr|A5BL97|A5BL97_VITVI Putative uncharacterized protein OS=Vitis... 133 1e-29
tr|Q9LVH5|Q9LVH5_ARATH Gb|AAB70409.1 OS=Arabidopsis thaliana GN=... 120 3e-28
tr|Q9MUK5|Q9MUK5_PEA Toc64 OS=Pisum sativum GN=toc64 PE=1 SV=1 118 2e-27
tr|B6ZLB9|B6ZLB9_TOBAC Indole-3-acetamide hydrolase (Fragment) O... 124 4e-27
tr|B6ZLB8|B6ZLB8_TOBAC Indole-3-acetamide hydrolase OS=Nicotiana... 124 4e-27
tr|Q9FR37|Q9FR37_ARATH Amidase (At1g08980/F7G19_15) OS=Arabidops... 120 7e-26
tr|Q7XT06|Q7XT06_ORYSJ Os04g0117800 protein OS=Oryza sativa subs... 120 7e-26
tr|Q01ML1|Q01ML1_ORYSA H0613H07.2 protein OS=Oryza sativa GN=H06... 120 7e-26
tr|O04032|O04032_ARATH F7G19.15 protein OS=Arabidopsis thaliana ... 120 7e-26
tr|A3AQC6|A3AQC6_ORYSJ cDNA, clone: J100072C12, full insert sequ... 120 7e-26
tr|A2XPT4|A2XPT4_ORYSI Putative uncharacterized protein OS=Oryza... 120 7e-26
tr|Q7XTK3|Q7XTK3_ORYSJ Os04g0118100 protein OS=Oryza sativa subs... 119 1e-25
tr|Q01ML0|Q01ML0_ORYSA H0613H07.3 protein OS=Oryza sativa GN=H06... 119 1e-25
tr|A2XPT5|A2XPT5_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25
tr|A8JA32|A8JA32_CHLRE Amidase OS=Chlamydomonas reinhardtii GN=A... 114 7e-24
tr|B6SPG6|B6SPG6_MAIZE Amidase OS=Zea mays PE=2 SV=1 112 2e-23
tr|Q9FY73|Q9FY73_ARATH Putative subunit of TOC complex OS=Arabid... 111 4e-23
tr|A7QIF4|A7QIF4_VITVI Chromosome chr12 scaffold_103, whole geno... 109 2e-22
tr|A9TA82|A9TA82_PHYPA Predicted protein (Fragment) OS=Physcomit... 107 5e-22
tr|Q94GR7|Q94GR7_ORYSA Chloroplast protein-translocon-like prote... 105 2e-21
tr|Q10E52|Q10E52_ORYSJ Os03g0707900 protein OS=Oryza sativa subs... 105 2e-21
tr|B8AQB7|B8AQB7_ORYSI Putative uncharacterized protein OS=Oryza... 105 2e-21
tr|A3ALX4|A3ALX4_ORYSJ Putative uncharacterized protein OS=Oryza... 105 2e-21
tr|Q2IYB9|Q2IYB9_RHOP2 Amidase OS=Rhodopseudomonas palustris (st... 105 3e-21
>tr|A7PH66|A7PH66_VITVI Chromosome chr17 scaffold_16, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017826001
PE=4 SV=1
Length = 590
Score = 132 bits (332), Expect(2) = 3e-33
Identities = 59/98 (60%), Positives = 71/98 (72%)
Frame = +1
Query: 364 DIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENKH 543
D+FD+EG++TGFGNPDW RTH+ A RT+P V+ LV+ GATC GKT +DEMAYS+ GENKH
Sbjct: 67 DVFDIEGYVTGFGNPDWARTHDTASRTSPVVSALVEGGATCTGKTVVDEMAYSINGENKH 126
Query: 544 YGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFALGTDT 657
YGTP NPAA SR+P VDF+LG DT
Sbjct: 127 YGTPTNPAAPSRIPGGSSSGAAVAVAANFVDFSLGLDT 164
Score = 33.5 bits (75), Expect(2) = 3e-33
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 173 ASPSNIWVXXXXXXXXXXXXTRSRKKQISKDFGAFIKYXXXXXXXXXXXXXXXXXXSNLT 352
+S +N+WV TR KK I +DFGAF++ +NL+
Sbjct: 3 SSSANLWVLLGLGLAGVLLMTRKLKKTIREDFGAFVQRLQLLPPPQPAPPKAPHPLTNLS 62
Query: 353 FAV 361
FAV
Sbjct: 63 FAV 65
>tr|A9TS00|A9TS00_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_197643 PE=4 SV=1
Length = 603
Score = 144 bits (362), Expect = 6e-33
Identities = 68/99 (68%), Positives = 76/99 (76%)
Frame = +1
Query: 361 QDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENK 540
+DIFDVEGF+TGFGNPDW THEPA RTA AV LV +GATCVGK HMDE+AYS+IG+NK
Sbjct: 68 KDIFDVEGFVTGFGNPDWAATHEPATRTALAVKYLVDSGATCVGKLHMDELAYSIIGDNK 127
Query: 541 HYGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFALGTDT 657
HYGTPVNPAA +RVP LVDF+LGTDT
Sbjct: 128 HYGTPVNPAAPTRVPGGSSSGSGVAVAADLVDFSLGTDT 166
>tr|Q6RJN7|Q6RJN7_PHYPA Chloroplast Toc64-1 OS=Physcomitrella patens
PE=2 SV=1
Length = 592
Score = 141 bits (356), Expect = 3e-32
Identities = 65/99 (65%), Positives = 76/99 (76%)
Frame = +1
Query: 361 QDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENK 540
+DIFD+EGF+TGFGNPDW THEPA RTA AV LV+AGATC+GK MDE+AYS+IG+NK
Sbjct: 70 KDIFDIEGFVTGFGNPDWASTHEPATRTAAAVKVLVEAGATCIGKLIMDELAYSIIGDNK 129
Query: 541 HYGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFALGTDT 657
HYGTPVNPAA +R+P LVDF+LGTDT
Sbjct: 130 HYGTPVNPAAPNRIPGGSSSGSGVAVAADLVDFSLGTDT 168
>tr|A5AGK8|A5AGK8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_008861 PE=4 SV=1
Length = 503
Score = 126 bits (316), Expect(2) = 2e-31
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = +1
Query: 364 DIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENKH 543
D+FD+EG++TGFGNPDW RTH+ A RT+P V+ LV+ GATC GKT +DEMAYS+ GENKH
Sbjct: 67 DVFDIEGYVTGFGNPDWARTHDTASRTSPVVSALVEGGATCTGKTVVDEMAYSINGENKH 126
Query: 544 YGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFAL 645
YGTP NPAA SR+P VDF+L
Sbjct: 127 YGTPTNPAAPSRIPGGSSSGAAVAVAANFVDFSL 160
Score = 33.5 bits (75), Expect(2) = 2e-31
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 173 ASPSNIWVXXXXXXXXXXXXTRSRKKQISKDFGAFIKYXXXXXXXXXXXXXXXXXXSNLT 352
+S +N+WV TR KK I +DFGAF++ +NL+
Sbjct: 3 SSSANLWVLLGLGLAGVLLMTRKLKKTIREDFGAFVQRLQLLPPPQPAPPKAPHPLTNLS 62
Query: 353 FAV 361
FAV
Sbjct: 63 FAV 65
>tr|Q6RJN6|Q6RJN6_PHYPA Chloroplast Toc64-2 OS=Physcomitrella patens
PE=2 SV=1
Length = 585
Score = 138 bits (347), Expect = 3e-31
Identities = 66/99 (66%), Positives = 73/99 (73%)
Frame = +1
Query: 361 QDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENK 540
+DIFDVEGFITGFGNP W THEPA TAPAV LV+AGA CVGK HMDE+AYS+ GENK
Sbjct: 69 KDIFDVEGFITGFGNPVWAETHEPATVTAPAVKVLVEAGAKCVGKLHMDELAYSINGENK 128
Query: 541 HYGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFALGTDT 657
HYGTPVNPAA +R+P VDF+LGTDT
Sbjct: 129 HYGTPVNPAAPNRIPGGSSSGSAVAVAANCVDFSLGTDT 167
>tr|A7PSC3|A7PSC3_VITVI Chromosome chr14 scaffold_27, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00022849001
PE=4 SV=1
Length = 433
Score = 133 bits (334), Expect = 1e-29
Identities = 61/99 (61%), Positives = 73/99 (73%)
Frame = +1
Query: 361 QDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENK 540
+DIFDV+G++TGFGNPDW RTH+ A+ TAP+V +++ GATCVGKT MDEMAYS+ GENK
Sbjct: 35 KDIFDVDGYVTGFGNPDWARTHQAAMLTAPSVLAVLKGGATCVGKTVMDEMAYSINGENK 94
Query: 541 HYGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFALGTDT 657
HYGTP NP A RVP LVDF+LGTDT
Sbjct: 95 HYGTPTNPQAPDRVPGGSSSGSAVAVGAMLVDFSLGTDT 133
>tr|A5BL97|A5BL97_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_015334 PE=4 SV=1
Length = 433
Score = 133 bits (334), Expect = 1e-29
Identities = 61/99 (61%), Positives = 73/99 (73%)
Frame = +1
Query: 361 QDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENK 540
+DIFDV+G++TGFGNPDW RTH+ A+ TAP+V +++ GATCVGKT MDEMAYS+ GENK
Sbjct: 35 KDIFDVDGYVTGFGNPDWARTHQAAMLTAPSVLAVLKGGATCVGKTVMDEMAYSINGENK 94
Query: 541 HYGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFALGTDT 657
HYGTP NP A RVP LVDF+LGTDT
Sbjct: 95 HYGTPTNPQAPDRVPGGSSSGSAVAVGAMLVDFSLGTDT 133
>tr|Q9LVH5|Q9LVH5_ARATH Gb|AAB70409.1 OS=Arabidopsis thaliana
GN=At3g17970 PE=4 SV=1
Length = 589
Score = 120 bits (300), Expect(2) = 3e-28
Identities = 54/98 (55%), Positives = 68/98 (69%)
Frame = +1
Query: 364 DIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENKH 543
D+FD+ G++TGFG+PDW RTHE A T+P V+ LV+ GATCVGKT +DE A+S+ GENKH
Sbjct: 67 DVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFSISGENKH 126
Query: 544 YGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFALGTDT 657
Y +P NPAA +R+P VDFALG DT
Sbjct: 127 YDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDT 164
Score = 29.3 bits (64), Expect(2) = 3e-28
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +2
Query: 182 SNIWVXXXXXXXXXXXXTRSRKKQISKDFGAFIKYXXXXXXXXXXXXXXXXXXSNLTFAV 361
+N+WV T+ KK + +DFGAFI + LTFAV
Sbjct: 6 ANLWVLLGLGLAGILMLTKKLKKTVREDFGAFIDKLMLLPPPQPAPPKAPHPLTGLTFAV 65
>tr|Q9MUK5|Q9MUK5_PEA Toc64 OS=Pisum sativum GN=toc64 PE=1 SV=1
Length = 593
Score = 118 bits (295), Expect(2) = 2e-27
Identities = 53/98 (54%), Positives = 68/98 (69%)
Frame = +1
Query: 364 DIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENKH 543
DIFD+EG ++ FG+P+W RTHEPA TA AV+ LV++GATC+G T +DE+AY + GENKH
Sbjct: 70 DIFDIEGHVSTFGHPEWARTHEPASSTASAVSALVESGATCIGTTVVDELAYGISGENKH 129
Query: 544 YGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFALGTDT 657
+GTP NPA +RVP VDF+LG DT
Sbjct: 130 FGTPTNPAVPNRVPGGSSSGAAVAVAANFVDFSLGVDT 167
Score = 28.1 bits (61), Expect(2) = 2e-27
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 170 MASPSN-IWVXXXXXXXXXXXXTRSRKKQISKDFGAFI 280
MASPS+ IWV TR + + +DFGAF+
Sbjct: 4 MASPSSQIWVILGLGLAGIYVLTRKLTQAVKEDFGAFL 41
>tr|B6ZLB9|B6ZLB9_TOBAC Indole-3-acetamide hydrolase (Fragment)
OS=Nicotiana tabacum GN=NtAMI1 PE=4 SV=1
Length = 167
Score = 124 bits (312), Expect = 4e-27
Identities = 60/99 (60%), Positives = 68/99 (68%)
Frame = +1
Query: 361 QDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENK 540
+DIFDVEG ITGFGNPDW +TH A TA V L++AGATC+ KT MDEMAYS+ GEN
Sbjct: 35 KDIFDVEGHITGFGNPDWAKTHSAATSTATTVLTLLKAGATCIAKTVMDEMAYSINGENV 94
Query: 541 HYGTPVNPAATSRVPXXXXXXXXXXXXXXLVDFALGTDT 657
HYGTPVNP + RVP LVDF+LGTDT
Sbjct: 95 HYGTPVNPVSPDRVPGGSSSGSAVAVGAKLVDFSLGTDT 133
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