DK961018 |
Clone id |
TST39A01NGRL0008_P18 |
Library |
TST39 |
Length |
644 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0008_P18. 5' end sequence. |
Accession |
DK961018 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1043Contig1 |
Sequence |
CAAACGCAGAGAGCGAAATCGGGCCTTTCCTGCGTACGTTAAACCCTATTTTTCATGCGT CGACGGGCTCCTACTGCAGAAGCAGCTCCTGCGGACATGGAGATTTCCCATCATCGTTTA CGCAGAGGTGTCACTGCGGTTTCAAAGGAGGATGGAGAAAGTTTATCCTCCAAAAAAAGA GGGAGGGGTGTTGCGAAGCAGGAAATGTCTGAGGGTGATGGGAAGAAGCTGAAACGAGCT GCAGAGAAGTCTGACAGTGAACTTGAAGATAATGGTGCAGCAGATGATTCAGACGGACAT GAAAGTGGTGAGGATAATGAAGGAAGCGGCGAGGGTTTAGGCGAAGGGTTTTATGAGGTA GAGAGCGTGTGCAAGAAACGTGTTCGTAAGGGTCAGGTGCAGTACCTTATAAAGTGGCGA GGATGGCCAGAGTCGGCAAATACTTGGGAACCCTTCGACAATGTTAAGGCTTGTGCAGAC ATCATAGAAGAATTTGAGCAAAGTTCTGCAGCCAAGCCAGGTAAAAGAGGGCGCAGCANA AAGAAAAGTGGAACAAATAGTTTGCCTCTGAAGAAGAAATGGAACTCACCAGAAAATGAG GAGGAGGGAAGTGCTGTGAACCTAGAGGAAGCCATTGTTGCAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q946J8 |
Definition |
sp|Q946J8|LHP1_ARATH Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana |
Align length |
52 |
Score (bit) |
87.0 |
E-value |
7.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7M6G6 |
Definition |
tr|A7M6G6|A7M6G6_MALDO Like heterochromatin protein 1 OS=Malus domestica |
Align length |
52 |
Score (bit) |
91.3 |
E-value |
5.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961018|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0008_P18, 5' (644 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7M6G6|A7M6G6_MALDO Like heterochromatin protein 1 OS=Malus d... 91 5e-17 tr|A7M6G2|A7M6G2_MALDO Terminal flower 2 protein OS=Malus domest... 91 5e-17 tr|A7M6G1|A7M6G1_MALDO Terminal flower 2 protein OS=Malus domest... 91 5e-17 tr|A7M6G0|A7M6G0_MALDO Terminal flower 2 protein OS=Malus domest... 91 5e-17 tr|A7M6F9|A7M6F9_MALDO Terminal flower 2 protein (Like heterochr... 91 5e-17 tr|Q8LK11|Q8LK11_MAIZE Putative uncharacterized protein OS=Zea m... 87 7e-16 tr|Q058P7|Q058P7_ARATH At5g17690 OS=Arabidopsis thaliana PE=2 SV=1 87 9e-16 tr|B7F9Z6|B7F9Z6_ORYSJ cDNA, clone: J100021I21, full insert sequ... 87 1e-15 tr|O65791|O65791_DAUCA Polycomb-like protein OS=Daucus carota PE... 84 6e-15 tr|Q6XJ26|Q6XJ26_DROYA Similar to Drosophila melanogaster Su(Var... 65 4e-09 tr|Q49BM3|Q49BM3_DROSI GD22433 OS=Drosophila simulans GN=rhi PE=... 65 4e-09 tr|B6UVT7|B6UVT7_DROME Heterochromatin protein 1 (Fragment) OS=D... 65 4e-09 tr|B6UVT6|B6UVT6_DROME Heterochromatin protein 1 OS=Drosophila m... 65 4e-09 tr|B6UVS3|B6UVS3_DROME Heterochromatin protein 1 (Fragment) OS=D... 65 4e-09 tr|B6UVS1|B6UVS1_DROME Heterochromatin protein 1 OS=Drosophila m... 65 4e-09 tr|B6UVR4|B6UVR4_DROME Heterochromatin protein 1 OS=Drosophila m... 65 4e-09 tr|B6UVR1|B6UVR1_DROSI Heterochromatin protein 1 OS=Drosophila s... 65 4e-09 tr|B6UVQ8|B6UVQ8_DROSI Heterochromatin protein 1 OS=Drosophila s... 65 4e-09 tr|B6UVQ6|B6UVQ6_DROYA Heterochromatin protein 1 OS=Drosophila y... 65 4e-09 tr|B4NWF2|B4NWF2_DROYA Su(Var)205 OS=Drosophila yakuba GN=Dyak\S... 65 4e-09 tr|B4HYG3|B4HYG3_DROSE GM13138 OS=Drosophila sechellia GN=GM1313... 65 4e-09 tr|A4V0F1|A4V0F1_DROME Heterochromatin protein 1 OS=Drosophila m... 65 4e-09 tr|B4KGW8|B4KGW8_DROMO GI15430 OS=Drosophila mojavensis GN=GI154... 64 8e-09 tr|Q4SFD2|Q4SFD2_TETNG Chromosome 2 SCAF14604, whole genome shot... 64 1e-08 tr|Q1KKW5|Q1KKW5_FUGRU Chromobox-like 1 OS=Fugu rubripes GN=Cbx1... 64 1e-08 tr|B4KNX4|B4KNX4_DROMO GI20276 OS=Drosophila mojavensis GN=GI202... 63 2e-08 tr|Q4SVN4|Q4SVN4_TETNG Chromosome undetermined SCAF13749, whole ... 62 2e-08 tr|A2VD66|A2VD66_XENLA LOC100037174 protein OS=Xenopus laevis GN... 62 2e-08 tr|Q0IFM9|Q0IFM9_AEDAE Predicted protein OS=Aedes aegypti GN=AAE... 62 2e-08 tr|B0BM60|B0BM60_XENTR Suppressor of variegation 3-9 homolog 2 O... 62 3e-08
>tr|A7M6G6|A7M6G6_MALDO Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=4 SV=1 Length = 453
Score = 91.3 bits (225), Expect = 5e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +1
Query: 349 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 504 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 107 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 158
>tr|A7M6G2|A7M6G2_MALDO Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1 Length = 456
Score = 91.3 bits (225), Expect = 5e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +1
Query: 349 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 504 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 106 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 157
>tr|A7M6G1|A7M6G1_MALDO Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1 Length = 456
Score = 91.3 bits (225), Expect = 5e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +1
Query: 349 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 504 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 106 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 157
>tr|A7M6G0|A7M6G0_MALDO Terminal flower 2 protein OS=Malus domestica GN=MdLHP1a PE=2 SV=1 Length = 453
Score = 91.3 bits (225), Expect = 5e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +1
Query: 349 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 504 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 107 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 158
>tr|A7M6F9|A7M6F9_MALDO Terminal flower 2 protein (Like heterochromatin protein 1) OS=Malus domestica GN=MdLHP1a PE=2 SV=1 Length = 453
Score = 91.3 bits (225), Expect = 5e-17 Identities = 36/52 (69%), Positives = 48/52 (92%) Frame = +1
Query: 349 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 504 FYE+E++ +KRVRKGQ+QYLIKWRGWPE+ANTWEP DN+++ AD++E FE+S Sbjct: 107 FYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEES 158
>tr|Q8LK11|Q8LK11_MAIZE Putative uncharacterized protein OS=Zea mays GN=crd101 PE=2 SV=1 Length = 380
Score = 87.4 bits (215), Expect = 7e-16 Identities = 32/53 (60%), Positives = 48/53 (90%) Frame = +1
Query: 349 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQSS 507 ++E+E++ ++R+RKGQ+QYL+KWRGWPESANTWEP +N+KAC+DI++ F + S Sbjct: 65 YFEIEAIRRRRLRKGQLQYLVKWRGWPESANTWEPLENLKACSDIVDAFNKRS 117
>tr|Q058P7|Q058P7_ARATH At5g17690 OS=Arabidopsis thaliana PE=2 SV=1 Length = 445
Score = 87.0 bits (214), Expect = 9e-16 Identities = 35/52 (67%), Positives = 47/52 (90%) Frame = +1
Query: 349 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 504 FYE+E++ +KRVRKG+VQYLIKWRGWPE+ANTWEP +N+++ AD+I+ FE S Sbjct: 107 FYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFEGS 158
>tr|B7F9Z6|B7F9Z6_ORYSJ cDNA, clone: J100021I21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 415
Score = 86.7 bits (213), Expect = 1e-15 Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 8/126 (6%) Frame = +1
Query: 145 KEDGESLSSKKRGRGVAKQEMS-----EGDGKKLKRAAEKSDSEL---EDNGAAXXXXXX 300 +E GE ++R G ++E EG + + AAE+ DS L E AA Sbjct: 40 EEQGEG-EGEERDEGEEEEEWEDAEEVEGGEESEQAAAEEEDSPLVVVEAEAAAPVVDGS 98
Query: 301 XXXXXXXXXXXXXXXXFYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACAD 480 +YE+E + ++R+RKG++QYL+KWRGWPESANTWEP +N+ AC+D Sbjct: 99 PPKLAEG---------YYEIEDIRRRRLRKGKLQYLVKWRGWPESANTWEPLENLSACSD 149
Query: 481 IIEEFE 498 II+ FE Sbjct: 150 IIDAFE 155
>tr|O65791|O65791_DAUCA Polycomb-like protein OS=Daucus carota PE=2 SV=1 Length = 392
Score = 84.3 bits (207), Expect = 6e-15 Identities = 32/56 (57%), Positives = 47/56 (83%) Frame = +1
Query: 349 FYEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQSSAAK 516 F+E+E + +KRV+KG+VQYL+KWRGWPESANTWEP ++++A D+++ FEQ + K Sbjct: 54 FFEIEHIRRKRVKKGEVQYLVKWRGWPESANTWEPVEHLEAVPDVVDAFEQRQSGK 109
>tr|Q6XJ26|Q6XJ26_DROYA Similar to Drosophila melanogaster Su(Var)205 (Fragment) OS=Drosophila yakuba GN=Su(var)205 PE=2 SV=1 Length = 166
Score = 65.1 bits (157), Expect = 4e-09 Identities = 26/51 (50%), Positives = 40/51 (78%) Frame = +1
Query: 352 YEVESVCKKRVRKGQVQYLIKWRGWPESANTWEPFDNVKACADIIEEFEQS 504 Y VE + +RVRKG+V+Y +KW+G+PE+ NTWEP +N+ C D+I+++E S Sbjct: 23 YAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLD-CQDLIQQYEAS 72
|