DK961029
Clone id TST39A01NGRL0009_A05
Library
Length 702
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_A05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CGAAGAGCACGCACTGTGAGATCTCGCTTTCTAGCGGAGTTCGTCGTCCTGCGACATGGC
TGCCCTCGCTGCCGCGTCCGTCTCCAACGCTGCTGCTCTGGGCAACAGCCTTGCCACCAA
GAATGCTCTTCGCGAGAAGGTCCCTGTGGTGCAGGCCAGAGTCAGCATGAATTCTGAGTA
CTGGTATGGGCCCGATCGCCCCAAATACCTTGGCCCCTTCTCTGCCCAGACCCCTTCCTA
CCTCAAGGGCGAGTTCCCTGGCGATTACGGCTGGGACACCGCTGGCCTATCTGCAGACCC
TGAGGCATTTGCTAAGAACAGGGCCTTGGAGGTTATTCACAGCCGATGGGCCATGCTTGG
AGCTTTGGGATGCATCTTCCCAGAGGTTGCACAGAAGTATCTGAATGTGTCCTTCAAGGA
GGCAGTCTGGTTCAAGGCTGGAGCACAGATTTTCTCAGAGGGTGGGTTGGACTACCTCGG
CAACCCCAACCTTGTTCATGCACAGAGCATTCTCGCCATTTGGGCATGCCAGGTGGTGTT
GATGGGAGCTGCAGAGGGCTACCGCATCAATGGTTTATCAGGAGTTGGTGAGGGTGGTGA
CTTGTATCCTGGTGGGCAATACTTTGACCCCTTGGGCTTGGCTGATGACCCAGAGACTCT
TGCTGAGTTGAAGGTGAAAGAGCTCAAGAATGGGCGCCTTGC
■■Homology search results ■■ -
sp_hit_id P27489
Definition sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum
Align length 197
Score (bit) 330.0
E-value 3.0e-90
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961029|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_A05, 5'
(702 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop... 330 3e-90
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty... 326 8e-89
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas... 290 7e-78
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas... 290 7e-78
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 288 3e-77
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 286 6e-77
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 286 7e-77
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 285 1e-76
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 284 3e-76
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop... 283 6e-76
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 283 8e-76
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 282 1e-75
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 282 1e-75
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 281 2e-75
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 281 2e-75
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 281 2e-75
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 281 3e-75
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 281 3e-75
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 280 4e-75
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 280 4e-75
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 280 5e-75
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 280 7e-75
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 280 7e-75
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 279 9e-75
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 279 9e-75
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 278 2e-74
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 278 2e-74
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 278 2e-74
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 278 2e-74
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 278 2e-74

>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
Length = 265

Score = 330 bits (847), Expect = 3e-90
Identities = 159/197 (80%), Positives = 173/197 (87%), Gaps = 2/197 (1%)
Frame = +2

Query: 116 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 289
TKNA LR+ V + AR +M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 23 TKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGL 82

Query: 290 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 469
SADPEAFAKNRALEVIH RWAMLGALGCIFPEV +K++ V FKE VWFKAG+QIFS+GGL
Sbjct: 83 SADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGL 142

Query: 470 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 649
DYLGNPNLVHAQSILA+ QVVLMG EG+RINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 143 DYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADD 202

Query: 650 PETLAELKVKELKNGRL 700
P T AELKVKE+KNGRL
Sbjct: 203 PTTFAELKVKEIKNGRL 219



Score = 30.8 bits (68), Expect = 7.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2

Query: 254 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 370
+PG +D GL+ DP FA+ + E+ + R AM G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226


>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type
III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
Length = 268

Score = 326 bits (835), Expect = 8e-89
Identities = 152/191 (79%), Positives = 166/191 (86%)
Frame = +2

Query: 128 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 307
LR+ R++M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEA
Sbjct: 32 LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91

Query: 308 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 487
FA+NRALEVIH RWAMLGALGC+FPEV QK++ V FKE VWFKAG+QIFSEGGLDYLGNP
Sbjct: 92 FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151

Query: 488 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETLAE 667
NLVHAQSILA+ QV+LMG EG+RINGL GVGEG DLYPGGQYFDPLGLADDP T AE
Sbjct: 152 NLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAE 211

Query: 668 LKVKELKNGRL 700
LKVKE+KNGRL
Sbjct: 212 LKVKEIKNGRL 222


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263

Score = 290 bits (741), Expect = 7e-78
Identities = 144/174 (82%), Positives = 151/174 (86%), Gaps = 1/174 (0%)
Frame = +2

Query: 182 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 361
WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 362 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 541
ALGC+FPE+ K V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 542 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKELKNGRL 700
MG EGYR+ G +GEG D +YPGG FDPLGLADDP+T AELKVKELKNGRL
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRL 217


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263

Score = 290 bits (741), Expect = 7e-78
Identities = 144/174 (82%), Positives = 151/174 (86%), Gaps = 1/174 (0%)
Frame = +2

Query: 182 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 361
WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 362 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 541
ALGC+FPE+ K V F EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA QVVL
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVL 165

Query: 542 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKELKNGRL 700
MG EGYR+ G +GEG D +YPGG FDPLGLADDP+T AELKVKELKNGRL
Sbjct: 166 MGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRL 217


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
I, chloroplastic OS=Lemna gibba PE=3 SV=1
Length = 264

Score = 288 bits (736), Expect = 3e-77
Identities = 151/202 (74%), Positives = 158/202 (78%), Gaps = 8/202 (3%)
Frame = +2

Query: 119 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 277
++ L KV V R SM WYG DRPK+LGPFS QTPSYL GEFPGDYGWD
Sbjct: 20 RDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 278 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 457
TAGLSADPE FAKNR LEVIHSRWAMLGALGCIFPE+ K V F EAVWFKAGAQIFS
Sbjct: 80 TAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN-GVQFGEAVWFKAGAQIFS 138

Query: 458 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 634
EGGLDYLGNPNLVHAQSILAIWA QVVLMG EGYR+ G +GEG D LYPGG FDPL
Sbjct: 139 EGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGG-GPLGEGLDPLYPGGA-FDPL 196

Query: 635 GLADDPETLAELKVKELKNGRL 700
GLADDPE AELKVKE+KNGRL
Sbjct: 197 GLADDPEAFAELKVKEIKNGRL 218



Score = 31.6 bits (70), Expect = 4.3
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2

Query: 254 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 370
+PG +D GL+ DPEAFA+ + E+ + R AM G
Sbjct: 188 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
Length = 265

Score = 286 bits (733), Expect = 6e-77
Identities = 141/180 (78%), Positives = 151/180 (83%), Gaps = 1/180 (0%)
Frame = +2

Query: 164 SMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHS 343
S + WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH
Sbjct: 43 SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 102

Query: 344 RWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIW 523
RWAMLGALGC+FPE+ K V F EAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIW
Sbjct: 103 RWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIW 161

Query: 524 ACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKELKNGRL 700
ACQVVLMG EGYR+ G +GEG D +YPGG FDPLGLADDP+ AELKVKE+KNGRL
Sbjct: 162 ACQVVLMGFVEGYRVGG-GPLGEGLDPIYPGGA-FDPLGLADDPDAFAELKVKEIKNGRL 219



Score = 30.4 bits (67), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2

Query: 254 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 370
+PG +D GL+ DP+AFA+ + E+ + R AM G
Sbjct: 189 YPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
Length = 265

Score = 286 bits (732), Expect = 7e-77
Identities = 141/174 (81%), Positives = 149/174 (85%), Gaps = 1/174 (0%)
Frame = +2

Query: 182 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 361
WYG DRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 49 WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 108

Query: 362 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 541
ALGC+FPE+ K V F EAVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAIWACQVVL
Sbjct: 109 ALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVL 167

Query: 542 MGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKELKNGRL 700
MG EGYR+ G +GEG D +YPGG FDPLGLADDPE AELKVKE+KNGRL
Sbjct: 168 MGFVEGYRVGG-GPLGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRL 219



Score = 31.6 bits (70), Expect = 4.3
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2

Query: 254 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 370
+PG +D GL+ DPEAFA+ + E+ + R AM G
Sbjct: 189 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
chloroplastic OS=Pinus thunbergii PE=2 SV=1
Length = 266

Score = 285 bits (730), Expect = 1e-76
Identities = 146/202 (72%), Positives = 158/202 (78%), Gaps = 8/202 (3%)
Frame = +2

Query: 119 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 277
+N L +KV QAR++M WYGPDRPKYLGPFS TPSYL GEFPGDYGWD
Sbjct: 22 QNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWD 81

Query: 278 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 457
TA +SADPE FAKNR LEVIH RWAMLGALGC+FPE+ K + F EAVWFKAGAQIFS
Sbjct: 82 TAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GLKFGEAVWFKAGAQIFS 140

Query: 458 EGGLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPL 634
EGGLDY GNPNL+HAQSILAIWACQVVLMG EGYR+ G +GEG D L PGG FDPL
Sbjct: 141 EGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG-GTLGEGLDPLLPGGA-FDPL 198

Query: 635 GLADDPETLAELKVKELKNGRL 700
GLADDPE AELKVKE+KNGRL
Sbjct: 199 GLADDPEACAELKVKEIKNGRL 220


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Length = 262

Score = 284 bits (727), Expect = 3e-76
Identities = 143/186 (76%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Frame = +2

Query: 146 VVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRA 325
V + +V+ + WYGPDR KYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR
Sbjct: 34 VGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 93

Query: 326 LEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNPNLVHAQ 505
LEVIHSRWAMLGALGC+FPE+ + V F EAVWFKAG+QIFSEGGLDYLGNP+L+HAQ
Sbjct: 94 LEVIHSRWAMLGALGCVFPELLSRN-GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 152

Query: 506 SILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLADDPETLAELKVKE 682
SILAIWACQVVLMGA EGYRI G +GE D LYPGG FDPLGLADDPE AELKVKE
Sbjct: 153 SILAIWACQVVLMGAVEGYRIAG-GPLGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKE 210

Query: 683 LKNGRL 700
LKNGRL
Sbjct: 211 LKNGRL 216



Score = 30.8 bits (68), Expect = 7.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2

Query: 254 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 370
+PG +D GL+ DPEAFA+ + E+ + R AM G
Sbjct: 186 YPGG-SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 223


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
Length = 265

Score = 283 bits (724), Expect = 6e-76
Identities = 145/199 (72%), Positives = 159/199 (79%), Gaps = 8/199 (4%)
Frame = +2

Query: 128 LREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAG 286
+R++ QAR +M WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAG
Sbjct: 24 IRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAG 83

Query: 287 LSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGG 466
LSADPE FA+NR LEVIHSRWAMLGALGC FPE+ +K V F EAVWFKAG+QIF+EGG
Sbjct: 84 LSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKN-GVKFGEAVWFKAGSQIFAEGG 142

Query: 467 LDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGD-LYPGGQYFDPLGLA 643
LDYLGNPNL+HAQSILAIWA QVVLMG EGYR+ G +GEG D LYPGG FDPLGLA
Sbjct: 143 LDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGG-GPLGEGLDPLYPGGA-FDPLGLA 200

Query: 644 DDPETLAELKVKELKNGRL 700
DDP++ AELKVKELKNGRL
Sbjct: 201 DDPDSFAELKVKELKNGRL 219


tr_hit_id Q9XQB1
Definition tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding protein OS=Phaseolus aureus
Align length 193
Score (bit) 330.0
E-value 5.0e-89
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961029|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_A05, 5'
(702 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding pr... 330 5e-89
tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding prote... 328 2e-88
tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, who... 327 6e-88
tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis... 327 6e-88
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten... 326 1e-87
tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome... 325 1e-87
tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza... 325 2e-87
tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding prote... 324 3e-87
tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subs... 323 5e-87
tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplas... 322 1e-86
tr|Q9S7M0|Q9S7M0_ARATH Type III chlorophyll a/b binding protein ... 322 2e-86
tr|B7SAW4|B7SAW4_BAMOL Chloroplast chlorophyll a/b binding prote... 322 2e-86
tr|Q9SDT2|Q9SDT2_DAUCA Chlorophyll a/b-binding protein OS=Daucus... 321 2e-86
tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding pr... 321 2e-86
tr|A9PJV4|A9PJV4_POPJC Putative uncharacterized protein OS=Popul... 320 6e-86
tr|B6SUM9|B6SUM9_MAIZE Chlorophyll a-b binding protein of LHCII ... 319 1e-85
tr|Q39341|Q39341_BRANA LHCII Type III chlorophyll a/b binding pr... 310 6e-83
tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b b... 302 1e-80
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b... 299 1e-79
tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding ... 297 4e-79
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote... 296 7e-79
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea... 296 1e-78
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea... 296 1e-78
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea... 296 1e-78
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ... 295 2e-78
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea... 294 4e-78
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea... 294 4e-78
tr|B6T1H1|B6T1H1_MAIZE Chlorophyll a-b binding protein OS=Zea ma... 293 6e-78
tr|B6SZT9|B6SZT9_MAIZE Chlorophyll a-b binding protein OS=Zea ma... 293 6e-78
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea... 293 7e-78

>tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding
protein OS=Phaseolus aureus GN=CipLhcb3 PE=2 SV=1
Length = 269

Score = 330 bits (846), Expect = 5e-89
Identities = 158/193 (81%), Positives = 169/193 (87%)
Frame = +2

Query: 122 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 301
N LR+ V + + SM++E WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31 NPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 302 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 481
EAFAKNRALEVIH RWAMLGALGCI PEV +K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91 EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 482 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 661
NPNLVHAQSILA+ QVVLMG EG+RINGL GVGEG +LYPGGQYFDPLGLADDP T
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPATF 210

Query: 662 AELKVKELKNGRL 700
AELKVKE+KNGRL
Sbjct: 211 AELKVKEIKNGRL 223


>tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding protein
cab-BO3 OS=Bambusa oldhamii PE=2 SV=1
Length = 267

Score = 328 bits (841), Expect = 2e-88
Identities = 158/197 (80%), Positives = 169/197 (85%), Gaps = 2/197 (1%)
Frame = +2

Query: 116 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 289
T NA LR+ R++M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 25 TANASPLRDVAAAANGRITMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGL 84

Query: 290 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 469
SADPEAFA+NRALEVIH RWAMLGALGCI PEV QK+L V FKE VWFKAGAQIFSEGGL
Sbjct: 85 SADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGL 144

Query: 470 DYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADD 649
DYLGNPNLVHAQSILA+ QV+LMG EGYRINGL GVGEG DLYPGGQYFDPLGLADD
Sbjct: 145 DYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLYPGGQYFDPLGLADD 204

Query: 650 PETLAELKVKELKNGRL 700
P T AELKVKE+KNGRL
Sbjct: 205 PVTFAELKVKEIKNGRL 221


>tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00009737001 PE=4 SV=1
Length = 264

Score = 327 bits (837), Expect = 6e-88
Identities = 156/193 (80%), Positives = 166/193 (86%)
Frame = +2

Query: 122 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 301
N LRE VP+ + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26 NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 302 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 481
EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 86 EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 145

Query: 482 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 661
NPNLVHAQSILA+ QVVLMG EGYRINGL GVGEG DLYPGG YFDPLGLADDP T
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADDPVTF 205

Query: 662 AELKVKELKNGRL 700
AELKVKE+KNGRL
Sbjct: 206 AELKVKEIKNGRL 218


>tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_001096 PE=4 SV=1
Length = 269

Score = 327 bits (837), Expect = 6e-88
Identities = 156/193 (80%), Positives = 166/193 (86%)
Frame = +2

Query: 122 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 301
N LRE VP+ + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 31 NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 90

Query: 302 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 481
EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91 EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 482 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 661
NPNLVHAQSILA+ QVVLMG EGYRINGL GVGEG DLYPGG YFDPLGLADDP T
Sbjct: 151 NPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADDPVTF 210

Query: 662 AELKVKELKNGRL 700
AELKVKE+KNGRL
Sbjct: 211 AELKVKEIKNGRL 223


>tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_223248 PE=4 SV=1
Length = 266

Score = 326 bits (835), Expect = 1e-87
Identities = 157/199 (78%), Positives = 169/199 (84%), Gaps = 6/199 (3%)
Frame = +2

Query: 122 NALREKVPVVQARVSM------NSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTA 283
N L +KV QARV M + WYGPDRP +LGPFS TPSYLKGEFPGDYGWDTA
Sbjct: 22 NELAQKVGSNQARVVMRGSKSSSGSMWYGPDRPLFLGPFSGNTPSYLKGEFPGDYGWDTA 81

Query: 284 GLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEG 463
GLSADPE+FA+NRALE+IH RWAMLGALGCI PE+ QKY V+ KE VWFKAGAQIFS+G
Sbjct: 82 GLSADPESFARNRALELIHGRWAMLGALGCITPELLQKYSRVTLKEPVWFKAGAQIFSDG 141

Query: 464 GLDYLGNPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLA 643
GLDYLGNPNL+HAQSILA+WA QVVLMGA E YR NGL GVGEGGDLYPGG+YFDPLGLA
Sbjct: 142 GLDYLGNPNLIHAQSILAVWAVQVVLMGAVEAYRTNGLPGVGEGGDLYPGGKYFDPLGLA 201

Query: 644 DDPETLAELKVKELKNGRL 700
DDPETLAELKVKELKNGRL
Sbjct: 202 DDPETLAELKVKELKNGRL 220


>tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027591001
PE=4 SV=1
Length = 264

Score = 325 bits (834), Expect = 1e-87
Identities = 154/193 (79%), Positives = 168/193 (87%)
Frame = +2

Query: 122 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 301
N LR+ VP+ + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26 NPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 302 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 481
EAFA+NRALEVIH RWAMLGALGCI PEV +K+L V FKE +WFKAGAQIFSEGGLDYLG
Sbjct: 86 EAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLG 145

Query: 482 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 661
NPNLVHAQSILA+ QVVLMG EG+RINGL GVG+G +LYPGGQYFDPLGLADDP T
Sbjct: 146 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTF 205

Query: 662 AELKVKELKNGRL 700
AELKVKE+KNGRL
Sbjct: 206 AELKVKEIKNGRL 218


>tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26482 PE=4 SV=1
Length = 266

Score = 325 bits (832), Expect = 2e-87
Identities = 153/191 (80%), Positives = 166/191 (86%)
Frame = +2

Query: 128 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 307
LR+ R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30 LRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 308 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 487
FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90 FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 488 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETLAE 667
NLVHAQSILA+ QVVLMG EGYRINGL GVG+G DLYPGGQYFDPLGLADDP T AE
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAE 209

Query: 668 LKVKELKNGRL 700
LKVKE+KNGRL
Sbjct: 210 LKVKEIKNGRL 220


>tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding protein
OS=Medicago falcata GN=CAB PE=2 SV=1
Length = 266

Score = 324 bits (831), Expect = 3e-87
Identities = 155/193 (80%), Positives = 168/193 (87%)
Frame = +2

Query: 122 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 301
N LR+ V + +R +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 28 NPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 87

Query: 302 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 481
EAFAKNRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 88 EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 147

Query: 482 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 661
NPNLVHAQSILA+ QVVLMG EG+RINGL GVGEG +LYPGGQYFDPLGLADDP T
Sbjct: 148 NPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTF 207

Query: 662 AELKVKELKNGRL 700
AELKVKE+KNGRL
Sbjct: 208 AELKVKEIKNGRL 220


>tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subsp.
japonica GN=P0406F06.32 PE=2 SV=1
Length = 266

Score = 323 bits (829), Expect = 5e-87
Identities = 152/191 (79%), Positives = 166/191 (86%)
Frame = +2

Query: 128 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 307
+R+ R++M+ E WYGPDR KYLGPFSAQTPSYL+GEFPGDYGWDTAGLSADPEA
Sbjct: 30 VRDIAAAATGRITMSKELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEA 89

Query: 308 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 487
FA+NRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAGAQIFS+GGLDYLGNP
Sbjct: 90 FARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNP 149

Query: 488 NLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETLAE 667
NLVHAQSILA+ QVVLMG EGYRINGL GVG+G DLYPGGQYFDPLGLADDP T AE
Sbjct: 150 NLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAE 209

Query: 668 LKVKELKNGRL 700
LKVKE+KNGRL
Sbjct: 210 LKVKEIKNGRL 220


>tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplast
chlorophyll-a/b binding protein) OS=Pisum sativum
GN=Lhcb3*1 PE=2 SV=1
Length = 265

Score = 322 bits (825), Expect = 1e-86
Identities = 153/193 (79%), Positives = 167/193 (86%)
Frame = +2

Query: 122 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 301
N LR+ V + ++ +M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 27 NPLRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 86

Query: 302 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 481
EAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 87 EAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 146

Query: 482 NPNLVHAQSILAIWACQVVLMGAAEGYRINGLSGVGEGGDLYPGGQYFDPLGLADDPETL 661
NPNLVHAQSILA+ Q+VLMG EG+RINGL VGEG DLYPGGQYFDPLGLADDP T
Sbjct: 147 NPNLVHAQSILAVLGFQIVLMGLVEGFRINGLPDVGEGNDLYPGGQYFDPLGLADDPVTF 206

Query: 662 AELKVKELKNGRL 700
AELKVKE+KNGRL
Sbjct: 207 AELKVKEIKNGRL 219