BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961038|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_A15, 5'
         (670 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O69969|DAPF_STRCO Diaminopimelate epimerase OS=Streptomyces c...    31   5.2  
sp|A1WXI8|BCHB_HALHL Light-independent protochlorophyllide reduc...    31   5.2  
sp|P27680|COQ3_YEAST Hexaprenyldihydroxybenzoate methyltransfera...    31   6.8  
sp|A8G2P6|SYI_PROM2 Isoleucyl-tRNA synthetase OS=Prochlorococcus...    30   8.9  

>sp|O69969|DAPF_STRCO Diaminopimelate epimerase OS=Streptomyces
           coelicolor GN=dapF PE=3 SV=1
          Length = 289

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = +3

Query: 195 IQNLCGQEVKVFQMYHQEA---SQGLLLPPTKGGRLKVYHVLLLGD-SVGPDLLQDVAGH 362
           +  +CG  V+VF  Y Q A   ++G L   T+GG +K  H+   GD +VG       AG 
Sbjct: 81  VAEMCGNGVRVFARYLQHAGHVTEGDLAVATRGG-VKTVHIAKNGDVTVGMGRALLPAGD 139

Query: 363 LTIDAGQ 383
           + +  G+
Sbjct: 140 VEVSVGE 146


>sp|A1WXI8|BCHB_HALHL Light-independent protochlorophyllide
           reductase subunit B OS=Halorhodospira halophila (strain
           DSM 244 / SL1) GN=bchB PE=3 SV=1
          Length = 526

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +3

Query: 309 LLLGDSVGPDLLQDVAGHLTIDAGQGLHLGVPILAL 416
           LL+GDS   +LLQD  G    D  QG+ L VP++ L
Sbjct: 89  LLVGDSCTAELLQDQPG----DLAQGMDLPVPVIGL 120


>sp|P27680|COQ3_YEAST Hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial OS=Saccharomyces cerevisiae GN=COQ3 PE=1
           SV=2
          Length = 312

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 320 AEEENVIYFETAAFCWWEEETLRRFL-MIHLKHFDFLTAKVLNPIFCKKENISISG 156
           A E+ V +F+  A  WW+ +  +R L  ++L   DF+   V N +  +   I + G
Sbjct: 36  ASEDEVKHFQELAPTWWDTDGSQRILHKMNLTRLDFVQRTVRNQVKIQNPEIFVPG 91


>sp|A8G2P6|SYI_PROM2 Isoleucyl-tRNA synthetase OS=Prochlorococcus
            marinus (strain MIT 9215) GN=ileS PE=3 SV=1
          Length = 965

 Score = 30.4 bits (67), Expect = 8.9
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
 Frame = -3

Query: 392  VETLTCVYS*VTCHVLEEIWTD--GIAEEENVIYFETAAFCW-WEEETLRRFLMIHLKHF 222
            VE L  + S V CH+ E+IW +   + +E++V       F   W+ E+L +    H+ + 
Sbjct: 786  VENLAVLISPVLCHMAEDIWQNIPYLTKEKSVFQRGWPIFSQSWKNESLNQ----HITNL 841

Query: 221  DFLTAKVLNPIFCKKENISISGGGLEVKDNNEPVA*FNKPQDGSKQSEGFSNKEYD 54
              L  ++ N       N  I G  LE + N  P   F K  D       F N++ D
Sbjct: 842  RNLRVEI-NKAIEGCRNKQIIGAALETEVNYLPKDKFVK--DSLNWLRKFGNEDVD 894

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961038|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_A15, 5'
         (670 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KM77|B6KM77_TOXGO PHD-finger domain-containing protein OS=T...    34   7.3  

>tr|B6KM77|B6KM77_TOXGO PHD-finger domain-containing protein
           OS=Toxoplasma gondii ME49 GN=TGME49_035550 PE=4 SV=1
          Length = 551

 Score = 34.3 bits (77), Expect = 7.3
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 442 SVPSTAISYPCCSFTQEEALTTVVSFSPGPLSHYS 546
           SVPS+A S PCCSF+   + +   SFS    S +S
Sbjct: 73  SVPSSAASSPCCSFSSSPSCSPFASFSSSSSSCFS 107