DK961043 |
Clone id |
TST39A01NGRL0009_A20 |
Library |
TST39 |
Length |
757 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_A20. 5' end sequence. |
Accession |
DK961043 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL264Contig1 |
Sequence |
GGACGCAGCGCTGCATCGCGGCCACTTTCGAGGCAAACGCAGTGATGGAGCTCTCGTGCC CATTGATAAAGAACATTCTGCTGCTGGATTCGGAAGGGAAGCGCGTCGCTGTTAAATATT TCTGCGATGAGTGGCCCAATCTCGCCTCAAAGCTTGCGTTTGAAAAATCCGTCTTCTCGA AGACGCAGCGCACCAATGCTCGAGCAGAAGCGGAAATAGGAATGTTTGATGGCTACATAG TTGTATACAAATTTGTATCTGATCTACACTTCTATGTGACTGGGGGTGATGATGAGAATG AACTCATTCTGGCAACAGTTTTACAAGGTTTCTTCGATGCGGTTTCTCTTCTGCTCAGGA ACAACGTTGACAAGAGAACAGTTCTTGAAAATTTGGACCTCATCTTTCTTTGTCTAGACG AGATTGTAGATGGCGGGATTATTTTGGAAACGGAAGCAAATGTTATAGCTGCCAAGGTGG CAATGCGGGGTGCAGATGCAGACGTTCCTCTCTCTGAACAGACTCTCACACAAGCTCTTG CCACAGCTAGGGAGCATCTTGCAAGATCTCTTCTGAAGTAAATTGAGTTTTACTTAACAA TGAAGGCAATTGCAGGATCAGTGTCTCTTTTTTTTATAAGATCTTTTCTTGATACATACC TCAATGAGGCAAAACACTACTCCAATCGGGCCTTTTTTTTTTCTTATTTGAGGACCAAAA TTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6Z844 |
Definition |
sp|Q6Z844|COPZ2_ORYSJ Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica |
Align length |
175 |
Score (bit) |
270.0 |
E-value |
8.0e-72 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RGL6 |
Definition |
tr|A9RGL6|A9RGL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
178 |
Score (bit) |
301.0 |
E-value |
2.0e-80 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961043|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_A20, 5' (726 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RGL6|A9RGL6_PHYPA Predicted protein OS=Physcomitrella paten... 301 2e-80 tr|B8LN03|B8LN03_PICSI Putative uncharacterized protein OS=Picea... 298 2e-79 tr|A9RJR7|A9RJR7_PHYPA Predicted protein OS=Physcomitrella paten... 296 7e-79 tr|A9S8T4|A9S8T4_PHYPA Predicted protein OS=Physcomitrella paten... 291 2e-77 tr|A9NMP8|A9NMP8_PICSI Putative uncharacterized protein OS=Picea... 291 4e-77 tr|A7QQK4|A7QQK4_VITVI Chromosome undetermined scaffold_143, who... 276 1e-72 tr|A7P6M8|A7P6M8_VITVI Chromosome chr9 scaffold_7, whole genome ... 275 2e-72 tr|Q9MAZ6|Q9MAZ6_SOLLC Nonclathrin coat protein zeta2-COP OS=Sol... 273 8e-72 tr|B6UH71|B6UH71_MAIZE Coatomer subunit zeta-1 OS=Zea mays PE=2 ... 271 2e-71 tr|Q9MAZ0|Q9MAZ0_MAIZE Coatomer subunit zeta-1 OS=Zea mays GN=co... 271 3e-71 tr|B8AG97|B8AG97_ORYSI Putative uncharacterized protein OS=Oryza... 270 9e-71 tr|B7E622|B7E622_ORYSJ cDNA clone:006-212-A06, full insert seque... 270 9e-71 tr|Q9MAZ7|Q9MAZ7_SOLLC Nonclathrin coat protein zeta1-COP OS=Sol... 268 2e-70 tr|B6T365|B6T365_MAIZE Coatomer subunit zeta-1 OS=Zea mays PE=2 ... 267 5e-70 tr|Q9MB00|Q9MB00_BRACM Nonclathrin coat protein zeta1-COP OS=Bra... 261 4e-68 tr|A9PBF0|A9PBF0_POPTR Putative uncharacterized protein OS=Popul... 261 4e-68 tr|B8AZ04|B8AZ04_ORYSI Putative uncharacterized protein OS=Oryza... 260 7e-68 tr|B7E3G5|B7E3G5_ORYSJ cDNA clone:001-023-H02, full insert seque... 260 7e-68 tr|A9P8D5|A9P8D5_POPTR Putative uncharacterized protein OS=Popul... 259 2e-67 tr|Q9MAZ1|Q9MAZ1_SOYBN Nonclathrin coat protein zeta2-COP OS=Gly... 258 3e-67 tr|Q9MAZ9|Q9MAZ9_SOYBN Nonclathrin coat protein zeta1-COP OS=Gly... 256 1e-66 tr|Q5QQ32|Q5QQ32_MEDTR Coatomer zeta1 subunit OS=Medicago trunca... 250 6e-65 tr|B7FGX1|B7FGX1_MEDTR Putative uncharacterized protein OS=Medic... 246 8e-64 tr|Q5QQ31|Q5QQ31_MEDTR Coatomer zeta2 subunit OS=Medicago trunca... 244 3e-63 tr|B6T9P5|B6T9P5_MAIZE Coatomer subunit zeta-1 OS=Zea mays PE=2 ... 241 5e-62 tr|B7FMX6|B7FMX6_MEDTR Putative uncharacterized protein OS=Medic... 240 8e-62 tr|B6T570|B6T570_MAIZE Coatomer subunit zeta-1 OS=Zea mays PE=2 ... 239 1e-61 tr|Q9MAY9|Q9MAY9_MAIZE Nonclathrin coat protein zeta1-COP OS=Zea... 239 1e-61 tr|A8JET7|A8JET7_CHLRE Zeta-cop, subunit of COP-I complex OS=Chl... 233 7e-60 tr|A2ZZE3|A2ZZE3_ORYSJ Putative uncharacterized protein OS=Oryza... 225 3e-57
>tr|A9RGL6|A9RGL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_202190 PE=4 SV=1 Length = 178
Score = 301 bits (772), Expect = 2e-80 Identities = 148/178 (83%), Positives = 168/178 (94%) Frame = +3
Query: 45 MELSCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEAEIGM 224 M++S PLIKN+LLLDSEGKRVAVKY+ D+WP LA KLA+EKSVF+KTQR+ AR+EAEIGM Sbjct: 1 MDVSTPLIKNVLLLDSEGKRVAVKYYSDDWPKLADKLAYEKSVFTKTQRSIARSEAEIGM 60
Query: 225 FDGYIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLENLDLI 404 FDGYIVVYKF+SDLHFYVTGG+DENELI+ATVLQGFFDAV LLLRNNVDK++VLENLDL+ Sbjct: 61 FDGYIVVYKFISDLHFYVTGGEDENELIVATVLQGFFDAVGLLLRNNVDKKSVLENLDLV 120
Query: 405 FLCLDEIVDGGIILETEANVIAAKVAMRGADADVPLSEQTLTQALATAREHLARSLLK 578 LCLDEI+DGGIILET+ANVIA +V+MRGADADVPLSEQTL QALATA+EH ARSLLK Sbjct: 121 LLCLDEIIDGGIILETDANVIAGRVSMRGADADVPLSEQTLAQALATAKEHFARSLLK 178
>tr|B8LN03|B8LN03_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 177
Score = 298 bits (763), Expect = 2e-79 Identities = 147/175 (84%), Positives = 164/175 (93%) Frame = +3
Query: 54 SCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEAEIGMFDG 233 SCPLIKNILLLDSEGKRVAVKY+ D+WP LASKLAFEKSVF+KTQ+TNARAEAEIGMFD Sbjct: 3 SCPLIKNILLLDSEGKRVAVKYYSDDWPTLASKLAFEKSVFTKTQKTNARAEAEIGMFDS 62
Query: 234 YIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLENLDLIFLC 413 +IV+YKF+SDLHFYVTGGDDENEL+LATVLQGFFDAV+LLLRNNV+KRT LENLDLIFLC Sbjct: 63 FIVLYKFISDLHFYVTGGDDENELVLATVLQGFFDAVALLLRNNVEKRTALENLDLIFLC 122
Query: 414 LDEIVDGGIILETEANVIAAKVAMRGADADVPLSEQTLTQALATAREHLARSLLK 578 LDEIVDGGIILETEA++IA ++ GAD PLSEQT++QALA+AREHLARSLLK Sbjct: 123 LDEIVDGGIILETEASLIAGRMVTHGADGGAPLSEQTISQALASAREHLARSLLK 177
>tr|A9RJR7|A9RJR7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175584 PE=4 SV=1 Length = 178
Score = 296 bits (759), Expect = 7e-79 Identities = 142/178 (79%), Positives = 169/178 (94%) Frame = +3
Query: 45 MELSCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEAEIGM 224 M+ S PL+KN+LLLD EGKRVAVKYF D+WP+L++KLAFEKS+F+KT RT+AR+EAEIG+ Sbjct: 1 MDASTPLVKNVLLLDGEGKRVAVKYFSDDWPSLSAKLAFEKSIFTKTHRTSARSEAEIGL 60
Query: 225 FDGYIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLENLDLI 404 FDGYIV+YKF+SDLHFYVTGG+DENELILATVLQGFFDAV+LLLRNNV+K+ +LENLDL+ Sbjct: 61 FDGYIVIYKFISDLHFYVTGGEDENELILATVLQGFFDAVALLLRNNVEKKNILENLDLV 120
Query: 405 FLCLDEIVDGGIILETEANVIAAKVAMRGADADVPLSEQTLTQALATAREHLARSLLK 578 LCLDEIVDGGIILET+ANVIA++VAMRGA+ DVPLSEQT++QALATA+EH ARSLLK Sbjct: 121 LLCLDEIVDGGIILETDANVIASRVAMRGANDDVPLSEQTISQALATAKEHFARSLLK 178
>tr|A9S8T4|A9S8T4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_182417 PE=4 SV=1 Length = 178
Score = 291 bits (746), Expect = 2e-77 Identities = 140/178 (78%), Positives = 166/178 (93%) Frame = +3
Query: 45 MELSCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEAEIGM 224 M++S L+KN++LLDSEGKRVAVKYF D+WP L++KLAFEKS+F+KT RT AR+EAEIG+ Sbjct: 1 MDVSISLVKNVILLDSEGKRVAVKYFSDDWPGLSAKLAFEKSIFTKTHRTGARSEAEIGL 60
Query: 225 FDGYIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLENLDLI 404 DGYIVVYKF+SDLHFYVTGG+DENE+I+ATVLQGFFDAVSLLLRNNVDK+ +LEN DL+ Sbjct: 61 LDGYIVVYKFISDLHFYVTGGEDENEIIVATVLQGFFDAVSLLLRNNVDKKNILENFDLV 120
Query: 405 FLCLDEIVDGGIILETEANVIAAKVAMRGADADVPLSEQTLTQALATAREHLARSLLK 578 LCLDEIVDGGIILET+ANVIA++VAMRGA+ DVPLSEQT++QALATA+EH ARSLLK Sbjct: 121 LLCLDEIVDGGIILETDANVIASRVAMRGANDDVPLSEQTISQALATAKEHFARSLLK 178
>tr|A9NMP8|A9NMP8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 178
Score = 291 bits (744), Expect = 4e-77 Identities = 147/176 (83%), Positives = 162/176 (92%), Gaps = 1/176 (0%) Frame = +3
Query: 54 SCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEAEIGMFDG 233 SCPLIKNILLLDSEGKRVAVKY+ D+WP LASKLAFEKSVF+KTQ+TNARAEAEIGMFD Sbjct: 3 SCPLIKNILLLDSEGKRVAVKYYSDDWPTLASKLAFEKSVFTKTQKTNARAEAEIGMFDS 62
Query: 234 YIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLENLDLIFLC 413 ++VVYKF+SDLHFYVTGGDDENELILATVLQGFFDAV+LLLR+NV+KRT LENLDLI LC Sbjct: 63 FVVVYKFISDLHFYVTGGDDENELILATVLQGFFDAVALLLRSNVEKRTALENLDLILLC 122
Query: 414 LDEIVDGGIILETEANVIAAKVAMRGAD-ADVPLSEQTLTQALATAREHLARSLLK 578 LDEIVDGGIILETE ++IA KV GAD PLSEQT++QALA+AREHLARSLLK Sbjct: 123 LDEIVDGGIILETEPSLIAGKVVTHGADGGGAPLSEQTISQALASAREHLARSLLK 178
>tr|A7QQK4|A7QQK4_VITVI Chromosome undetermined scaffold_143, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003398001 PE=4 SV=1 Length = 183
Score = 276 bits (705), Expect = 1e-72 Identities = 137/175 (78%), Positives = 152/175 (86%) Frame = +3
Query: 54 SCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEAEIGMFDG 233 SCP +KNILLLDSEGKRVAVKY+CD+WP +K FEKSVFSKTQ+TNAR EAEI MF+ Sbjct: 9 SCPSVKNILLLDSEGKRVAVKYYCDDWPTNNAKETFEKSVFSKTQKTNARTEAEIAMFEN 68
Query: 234 YIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLENLDLIFLC 413 IVVYKFV DLHF+VTGG+DENELILATVLQGFFDAV LLLR NVDK+ LENLDLI LC Sbjct: 69 NIVVYKFVQDLHFFVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEALENLDLILLC 128
Query: 414 LDEIVDGGIILETEANVIAAKVAMRGADADVPLSEQTLTQALATAREHLARSLLK 578 LDEI+DGGI+LET+ANVIA KVA D+ PLSEQT++QALATAREHLARSLLK Sbjct: 129 LDEIIDGGIVLETDANVIAGKVASHSLDSGAPLSEQTISQALATAREHLARSLLK 183
>tr|A7P6M8|A7P6M8_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034130001 PE=4 SV=1 Length = 183
Score = 275 bits (704), Expect = 2e-72 Identities = 139/182 (76%), Positives = 155/182 (85%) Frame = +3
Query: 33 ANAVMELSCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEA 212 AN +CP IKNILLLDSEGKRVAVKY+ D+WP A+KLAFEKSVF+KTQ+TNAR EA Sbjct: 2 ANFSTHGACPSIKNILLLDSEGKRVAVKYYSDDWPTNAAKLAFEKSVFTKTQKTNARTEA 61
Query: 213 EIGMFDGYIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLEN 392 EI MF+ +V+YKF+ DLHF+VTGGDDENELILATVLQGF DAV+LLLRNN+DKR LEN Sbjct: 62 EIAMFENNVVIYKFIQDLHFFVTGGDDENELILATVLQGFSDAVALLLRNNIDKREALEN 121
Query: 393 LDLIFLCLDEIVDGGIILETEANVIAAKVAMRGADADVPLSEQTLTQALATAREHLARSL 572 LDLI LCLDEIVDGG+ILET+A+VI KVA DA PLSEQTLTQALATAREHL RSL Sbjct: 122 LDLILLCLDEIVDGGMILETDASVIEGKVAAHSIDAGAPLSEQTLTQALATAREHLTRSL 181
Query: 573 LK 578 LK Sbjct: 182 LK 183
>tr|Q9MAZ6|Q9MAZ6_SOLLC Nonclathrin coat protein zeta2-COP OS=Solanum lycopersicum GN=copz2 PE=2 SV=1 Length = 183
Score = 273 bits (698), Expect = 8e-72 Identities = 133/175 (76%), Positives = 155/175 (88%) Frame = +3
Query: 54 SCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEAEIGMFDG 233 SCP++KNILLLDSEGKRVAVKY+CD+WP ++KLAFEKS+F+KTQ+TNAR EAEI MFD Sbjct: 9 SCPVVKNILLLDSEGKRVAVKYYCDDWPTYSAKLAFEKSIFTKTQKTNARTEAEIAMFDS 68
Query: 234 YIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLENLDLIFLC 413 IVVYKFV DLHF+VTGGDDENELILATVLQGF+DAV+LLLR+NV++R LENLDLI LC Sbjct: 69 NIVVYKFVQDLHFFVTGGDDENELILATVLQGFYDAVTLLLRSNVEQREALENLDLILLC 128
Query: 414 LDEIVDGGIILETEANVIAAKVAMRGADADVPLSEQTLTQALATAREHLARSLLK 578 LDEIVDGG+ILET+ +VIA KVA D P+SEQT++QALATAREHL RSLL+ Sbjct: 129 LDEIVDGGMILETDGSVIAGKVASHNMDDGSPISEQTISQALATAREHLTRSLLR 183
>tr|B6UH71|B6UH71_MAIZE Coatomer subunit zeta-1 OS=Zea mays PE=2 SV=1 Length = 182
Score = 271 bits (694), Expect = 2e-71 Identities = 136/175 (77%), Positives = 152/175 (86%) Frame = +3
Query: 54 SCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEAEIGMFDG 233 SCP +KNILLLDSEGKRVAVKYF D+WP ASKLA+EKSVF+KT +TNAR EAEI +FDG Sbjct: 8 SCPSVKNILLLDSEGKRVAVKYFSDDWPTNASKLAYEKSVFTKTLKTNARTEAEITLFDG 67
Query: 234 YIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLENLDLIFLC 413 YIVVYKFV DLHF+VT GDDENELILA+VL GF D+V LLLR++V+KRT LENLDLI LC Sbjct: 68 YIVVYKFVHDLHFFVTAGDDENELILASVLHGFSDSVGLLLRSDVEKRTALENLDLILLC 127
Query: 414 LDEIVDGGIILETEANVIAAKVAMRGADADVPLSEQTLTQALATAREHLARSLLK 578 +DEIVDGGIILET+AN IA KVA D VP SEQT++QALATAREHLARSLLK Sbjct: 128 IDEIVDGGIILETDANTIAGKVATNAVDGSVPFSEQTISQALATAREHLARSLLK 182
>tr|Q9MAZ0|Q9MAZ0_MAIZE Coatomer subunit zeta-1 OS=Zea mays GN=copz2 PE=2 SV=1 Length = 182
Score = 271 bits (693), Expect = 3e-71 Identities = 136/175 (77%), Positives = 151/175 (86%) Frame = +3
Query: 54 SCPLIKNILLLDSEGKRVAVKYFCDEWPNLASKLAFEKSVFSKTQRTNARAEAEIGMFDG 233 SCP +KNILLLDSEGKRVAVKYF D+WP ASKLA+EKSVF+KT +TNAR EAEI +FDG Sbjct: 8 SCPSVKNILLLDSEGKRVAVKYFSDDWPTNASKLAYEKSVFTKTLKTNARTEAEITLFDG 67
Query: 234 YIVVYKFVSDLHFYVTGGDDENELILATVLQGFFDAVSLLLRNNVDKRTVLENLDLIFLC 413 YIVVYKFV DLHF+VT GDDENELILA+VL GF D+V LLLR +V+KRT LENLDLI LC Sbjct: 68 YIVVYKFVHDLHFFVTAGDDENELILASVLHGFSDSVGLLLRGDVEKRTALENLDLILLC 127
Query: 414 LDEIVDGGIILETEANVIAAKVAMRGADADVPLSEQTLTQALATAREHLARSLLK 578 +DEIVDGGIILET+AN IA KVA D VP SEQT++QALATAREHLARSLLK Sbjct: 128 IDEIVDGGIILETDANTIAGKVATNAVDGSVPFSEQTISQALATAREHLARSLLK 182
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