DK961051 |
Clone id |
TST39A01NGRL0009_B04 |
Library |
TST39 |
Length |
475 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_B04. 5' end sequence. |
Accession |
DK961051 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CTCGACGAGACCATTTCCCGTGCTGAACTGCGCTCCATGTATAGCTTCTGAGTTCCGCAA GCATGAGAACGTTCAGAACCCCCAGGTAATCGACATGCTTGTGTTCAAAGGACAGGAGGA GCTACATAATATTCTGTCACATTCAAAGCAACGGCATCATATTCTGTCCGAGTATATCGT GGGGCAAGAGGGCCTGGTACCACCTTTGAAATTGGGGATTGCAGACCATGGTGAATCAGA TTTTCTCAAGAAGTTTTACATTAGCAACCGCACATAACTACGAACACGTTTATTCGTGCA TGGAACATCATGCTCATGAAAAGCATGTTTACATAACAGATGAATGGCATGGACCTCTTT CACGGAGAGTGGTAAGGATGATTCAAAGCAAGTGCTTTGTGAGTGAATGTAGGACTTGAC AGATTCCACAGTAAAATTTCAAATAATATTTTGTGAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q02366 |
Definition |
sp|Q02366|NDUA6_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus |
Align length |
72 |
Score (bit) |
42.4 |
E-value |
0.001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FHZ4 |
Definition |
tr|B4FHZ4|B4FHZ4_MAIZE NADH ubiquinone oxidoreductase B14 subunit OS=Zea mays |
Align length |
76 |
Score (bit) |
100.0 |
E-value |
5.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961051|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_B04, 5' (455 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FHZ4|B4FHZ4_MAIZE NADH ubiquinone oxidoreductase B14 subuni... 100 5e-20 tr|A9RFV7|A9RFV7_PHYPA Predicted protein OS=Physcomitrella paten... 100 5e-20 tr|Q8GS72|Q8GS72_ORYSJ Os07g0640100 protein OS=Oryza sativa subs... 98 2e-19 tr|A2YP57|A2YP57_ORYSI Putative uncharacterized protein OS=Oryza... 98 2e-19 tr|A9T0K9|A9T0K9_PHYPA Predicted protein OS=Physcomitrella paten... 97 4e-19 tr|A9P0K9|A9P0K9_PICSI Putative uncharacterized protein OS=Picea... 95 2e-18 tr|A7Q5C5|A7Q5C5_VITVI Chromosome undetermined scaffold_53, whol... 89 1e-16 tr|B7FMX5|B7FMX5_MEDTR Putative uncharacterized protein OS=Medic... 88 2e-16 tr|B7FMK0|B7FMK0_MEDTR Putative uncharacterized protein OS=Medic... 87 3e-16 tr|Q9LHI0|Q9LHI0_ARATH Arabidopsis thaliana genomic DNA, chromos... 82 1e-14 tr|A9PBX8|A9PBX8_POPTR Putative uncharacterized protein OS=Popul... 79 9e-14 tr|Q6UKY9|Q6UKY9_CHLRE NADH:ubiquinone oxidoreductase B14 subuni... 49 2e-04 tr|Q17Q29|Q17Q29_AEDAE NADH dehydrogenase, putative OS=Aedes aeg... 48 2e-04 tr|Q7JZK1|Q7JZK1_DROME CG7712 OS=Drosophila melanogaster GN=CG77... 48 3e-04 tr|B4NSC9|B4NSC9_DROSI GD15258 (GD15256) OS=Drosophila simulans ... 48 3e-04 tr|B3MCS3|B3MCS3_DROAN GF13389 OS=Drosophila ananassae GN=GF1338... 48 3e-04 tr|Q7Q9C1|Q7Q9C1_ANOGA AGAP003328-PA (Fragment) OS=Anopheles gam... 47 4e-04 tr|B4P7M4|B4P7M4_DROYA GE13063 OS=Drosophila yakuba GN=GE13063 P... 47 4e-04 tr|B3NN29|B3NN29_DROER GG22707 OS=Drosophila erecta GN=GG22707 P... 47 4e-04 tr|Q7QM15|Q7QM15_ANOGA AGAP012533-PA (Fragment) OS=Anopheles gam... 47 5e-04 tr|B4HN24|B4HN24_DROSE GM20483 OS=Drosophila sechellia GN=GM2048... 46 8e-04 tr|Q1W2A1|Q1W2A1_9HEMI Putative NADH-ubiquinone oxidoreductase O... 46 0.001 tr|B4KTT1|B4KTT1_DROMO GI18433 OS=Drosophila mojavensis GN=GI184... 45 0.001 tr|A4QNG0|A4QNG0_XENTR Putative uncharacterized protein LOC55010... 44 0.003 tr|B4MRY0|B4MRY0_DROWI GK15672 OS=Drosophila willistoni GN=GK156... 43 0.007 tr|B4JVZ0|B4JVZ0_DROGR GH22942 OS=Drosophila grimshawi GN=GH2294... 43 0.009 tr|B5X7Q3|B5X7Q3_SALSA NADH dehydrogenase 1 alpha subcomplex sub... 42 0.012 tr|B5X7I8|B5X7I8_SALSA NADH dehydrogenase 1 alpha subcomplex sub... 42 0.012 tr|B4LJC1|B4LJC1_DROVI GJ21517 OS=Drosophila virilis GN=GJ21517 ... 42 0.012 tr|B0WI32|B0WI32_CULQU NADH dehydrogenase 1 alpha subcomplex sub... 42 0.012
>tr|B4FHZ4|B4FHZ4_MAIZE NADH ubiquinone oxidoreductase B14 subunit OS=Zea mays PE=2 SV=1 Length = 132
Score = 100 bits (248), Expect = 5e-20 Identities = 47/76 (61%), Positives = 60/76 (78%) Frame = +2
Query: 41 IASEFRKHENVQNPQVIDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLVPPLKLGI 220 IA E RK++NV NP+VIDML+F EEL+NI+ H+KQRHH++ +Y++GQEGLV +LG Sbjct: 57 IAKEIRKNQNVTNPKVIDMLLFNATEELNNIVEHAKQRHHVIGQYVIGQEGLVH--ELGS 114
Query: 221 ADHGESDFLKKFYISN 268 D G SDFLKKFY SN Sbjct: 115 KDLGNSDFLKKFYTSN 130
>tr|A9RFV7|A9RFV7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_174407 PE=4 SV=1 Length = 137
Score = 100 bits (248), Expect = 5e-20 Identities = 52/77 (67%), Positives = 59/77 (76%), Gaps = 1/77 (1%) Frame = +2
Query: 41 IASEFRKHENVQNPQVIDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLV-PPLKLG 217 IA EFRKH + NP+VIDMLVFKG+EEL + HSKQRHH+LS+YIVG+EGL LKLG Sbjct: 60 IAFEFRKHHHNTNPKVIDMLVFKGREELQYCVDHSKQRHHLLSQYIVGREGLTGDVLKLG 119
Query: 218 IADHGESDFLKKFYISN 268 A GESDFLK FY N Sbjct: 120 EAFKGESDFLKNFYRGN 136
>tr|Q8GS72|Q8GS72_ORYSJ Os07g0640100 protein OS=Oryza sativa subsp. japonica GN=P0524G08.101 PE=2 SV=1 Length = 131
Score = 97.8 bits (242), Expect = 2e-19 Identities = 46/76 (60%), Positives = 58/76 (76%) Frame = +2
Query: 41 IASEFRKHENVQNPQVIDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLVPPLKLGI 220 IA E RK++ V NP+VIDML+FKG EEL NI H+KQRHH++ +Y+VGQ+GLV ++ Sbjct: 57 IAKEIRKNQGVTNPKVIDMLLFKGMEELGNITEHAKQRHHVIGQYVVGQKGLVQDME--- 113
Query: 221 ADHGESDFLKKFYISN 268 D G SDFLKKFY SN Sbjct: 114 KDQGSSDFLKKFYTSN 129
>tr|A2YP57|A2YP57_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27047 PE=4 SV=1 Length = 131
Score = 97.8 bits (242), Expect = 2e-19 Identities = 46/76 (60%), Positives = 58/76 (76%) Frame = +2
Query: 41 IASEFRKHENVQNPQVIDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLVPPLKLGI 220 IA E RK++ V NP+VIDML+FKG EEL NI H+KQRHH++ +Y+VGQ+GLV ++ Sbjct: 57 IAKEIRKNQGVTNPKVIDMLLFKGMEELGNITEHAKQRHHVIGQYVVGQKGLVQDME--- 113
Query: 221 ADHGESDFLKKFYISN 268 D G SDFLKKFY SN Sbjct: 114 KDQGSSDFLKKFYTSN 129
>tr|A9T0K9|A9T0K9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_190471 PE=4 SV=1 Length = 138
Score = 97.1 bits (240), Expect = 4e-19 Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 2/78 (2%) Frame = +2
Query: 41 IASEFRKHENVQNPQV-IDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLV-PPLKL 214 IASEFRKH + NP+V IDMLVFKG+EEL + HSKQRHH+L++YIVG+EGL LKL Sbjct: 60 IASEFRKHHHNTNPKVVIDMLVFKGREELQYCIDHSKQRHHLLTQYIVGREGLTGDVLKL 119
Query: 215 GIADHGESDFLKKFYISN 268 G A GESDFLK FY N Sbjct: 120 GEAFKGESDFLKNFYRGN 137
>tr|A9P0K9|A9P0K9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 133
Score = 94.7 bits (234), Expect = 2e-18 Identities = 44/76 (57%), Positives = 56/76 (73%) Frame = +2
Query: 41 IASEFRKHENVQNPQVIDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLVPPLKLGI 220 +A++FRK +V NP+VIDML+ KG EEL N L HSKQRHHIL +Y++ Q GL+P +G Sbjct: 57 VAAQFRKQAHVTNPKVIDMLIIKGDEELRNCLDHSKQRHHILGQYVIAQGGLIPS-NVGA 115
Query: 221 ADHGESDFLKKFYISN 268 G SDFL+KFY SN Sbjct: 116 VSSGGSDFLQKFYNSN 131
>tr|A7Q5C5|A7Q5C5_VITVI Chromosome undetermined scaffold_53, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030884001 PE=4 SV=1 Length = 133
Score = 89.0 bits (219), Expect = 1e-16 Identities = 43/76 (56%), Positives = 55/76 (72%) Frame = +2
Query: 41 IASEFRKHENVQNPQVIDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLVPPLKLGI 220 IASEFRK+ +V N +VIDML+FKG EE N++ HSKQRHHI+ +Y++ +E LV G Sbjct: 58 IASEFRKNSHVTNTKVIDMLLFKGMEEFRNVVEHSKQRHHIIGQYVLAREHLVQ--DAGA 115
Query: 221 ADHGESDFLKKFYISN 268 D G S+FLK FY SN Sbjct: 116 KDQGMSEFLKNFYSSN 131
>tr|B7FMX5|B7FMX5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 133
Score = 88.2 bits (217), Expect = 2e-16 Identities = 41/76 (53%), Positives = 59/76 (77%) Frame = +2
Query: 41 IASEFRKHENVQNPQVIDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLVPPLKLGI 220 IA+E RK++++ NP+VIDML+FKG EEL N+++HSKQRHHI+ +Y+VG+ GL +L Sbjct: 57 IAAEIRKNDHITNPKVIDMLLFKGLEELKNVVNHSKQRHHIVGQYVVGRRGL-EQQELAA 115
Query: 221 ADHGESDFLKKFYISN 268 + G S+FLK FY +N Sbjct: 116 KEQGISNFLKNFYDTN 131
>tr|B7FMK0|B7FMK0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 133
Score = 87.4 bits (215), Expect = 3e-16 Identities = 40/76 (52%), Positives = 59/76 (77%) Frame = +2
Query: 41 IASEFRKHENVQNPQVIDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLVPPLKLGI 220 IA+E RK++++ NP+VIDML+FKG EEL N+++HSKQRHHI+ +Y+VG+ GL ++ Sbjct: 57 IAAEIRKNDHITNPKVIDMLLFKGLEELKNVVNHSKQRHHIVGQYVVGRRGL-EQQEMAA 115
Query: 221 ADHGESDFLKKFYISN 268 + G S+FLK FY +N Sbjct: 116 KEQGISNFLKNFYDTN 131
>tr|Q9LHI0|Q9LHI0_ARATH Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC3 (Putative uncharacterized protein F28J15.12) OS=Arabidopsis thaliana GN=F28J15.12 PE=2 SV=1 Length = 133
Score = 82.4 bits (202), Expect = 1e-14 Identities = 39/76 (51%), Positives = 57/76 (75%) Frame = +2
Query: 41 IASEFRKHENVQNPQVIDMLVFKGQEELHNILSHSKQRHHILSEYIVGQEGLVPPLKLGI 220 I+++ R + ++ +P+VID+L+FKG EEL +I+ H+KQRHHI+ +Y+VG EGLV G Sbjct: 59 ISAQIRNNAHITDPKVIDLLIFKGMEELTDIVDHAKQRHHIIGQYVVG-EGLVQ--NTGN 115
Query: 221 ADHGESDFLKKFYISN 268 D G++DFLK FY SN Sbjct: 116 KDQGKTDFLKNFYTSN 131
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