BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961069|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_B22, 5'
         (665 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CYZ6|CS060_MOUSE Uncharacterized protein C19orf60 homolog O...    32   3.0  
sp|Q1D0S8|MURD_MYXXD UDP-N-acetylmuramoylalanine--D-glutamate li...    32   3.9  
sp|Q8TCU4|ALMS1_HUMAN Alstrom syndrome protein 1 OS=Homo sapiens...    32   3.9  
sp|Q15628|TRADD_HUMAN Tumor necrosis factor receptor type 1-asso...    31   6.7  

>sp|Q9CYZ6|CS060_MOUSE Uncharacterized protein C19orf60 homolog
           OS=Mus musculus PE=2 SV=1
          Length = 169

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 20/88 (22%), Positives = 42/88 (47%)
 Frame = +1

Query: 289 AQATGENDEAWKHFTASSRPLNVTCSTAIFMLASIALGIRAASASACAFQGELPGYQGLP 468
           AQA    D+A + +  S +  +     ++  +  +     AAS    A + EL G +  P
Sbjct: 44  AQAFRRLDQAHRQYLLSGQHYDFPSYRSV--VHEVTQAFAAASREVLAVEAELAGPRAQP 101

Query: 469 LIREEVKAISELEVSRFSSTSGVTALPT 552
           ++   V+++ ELE +R ++ + +  + T
Sbjct: 102 VLARHVRSLQELEQTRLATVALLQVMGT 129


>sp|Q1D0S8|MURD_MYXXD UDP-N-acetylmuramoylalanine--D-glutamate
           ligase OS=Myxococcus xanthus (strain DK 1622) GN=murD
           PE=3 SV=1
          Length = 455

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 322 KHFTASSRPLNVTCSTAIFMLASIALGIRAASASACAFQGELPGYQGLPLIREEVKAISE 501
           +H+T ++R L    +    M A  AL  R    ++ A Q  L GY GLP   E V+ +  
Sbjct: 273 EHYTLTNRALRGAHNAQNAMAA--ALLARLGGVASGAVQAGLDGYPGLPHRLESVRVLDG 330

Query: 502 LE-VSRFSSTSGVTALPTVREFLQ 570
           +E V+   +T+  + L  +R F Q
Sbjct: 331 VEWVNDSKATNVDSVLVALRAFSQ 354


>sp|Q8TCU4|ALMS1_HUMAN Alstrom syndrome protein 1 OS=Homo sapiens
            GN=ALMS1 PE=1 SV=2
          Length = 4167

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = +1

Query: 409  AASASACAFQGELPGYQGLPLIREEVKAISELEVSRFSSTSGVTALPTVREFLQVQNTEE 588
            AA+A   A  G+ P  + LP    + KAI++ E      T    A P  +E LQ+ N EE
Sbjct: 3408 AAAAEHSAQVGD-PEMKNLP----DTKAITQKEEIHRKKTVPEEAWPNNKESLQI-NIEE 3461

Query: 589  YECDAH-EACIDSVFRTPRHY 648
             EC +  E    SVFR+ + Y
Sbjct: 3462 SECHSEFENTTRSVFRSAKFY 3482


>sp|Q15628|TRADD_HUMAN Tumor necrosis factor receptor type
           1-associated DEATH domain protein OS=Homo sapiens
           GN=TRADD PE=1 SV=2
          Length = 312

 Score = 30.8 bits (68), Expect = 6.7
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 105 TCILIRTPDRVHPKRLPQLREALQGLPC 22
           +CIL + PDR+  + L +L +AL+ L C
Sbjct: 137 SCILAQQPDRLRDEELAELEDALRNLKC 164

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961069|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_B22, 5'
         (665 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4ACL8|A4ACL8_9GAMM Putative uncharacterized protein OS=Congr...    35   4.2  
tr|Q9XWX3|Q9XWX3_CAEEL Putative uncharacterized protein scl-21 O...    35   5.5  
tr|Q7PMS0|Q7PMS0_ANOGA AGAP004795-PA OS=Anopheles gambiae GN=AGA...    34   7.1  

>tr|A4ACL8|A4ACL8_9GAMM Putative uncharacterized protein
           OS=Congregibacter litoralis KT71 GN=KT71_19243 PE=4 SV=1
          Length = 261

 Score = 35.0 bits (79), Expect = 4.2
 Identities = 23/64 (35%), Positives = 34/64 (53%)
 Frame = +1

Query: 349 LNVTCSTAIFMLASIALGIRAASASACAFQGELPGYQGLPLIREEVKAISELEVSRFSST 528
           L V  ST I  L    LGI A S  + A Q + PG Q  P   +E++A++  +    +ST
Sbjct: 2   LTVVASTLITALPLTTLGITAQSLVSTAAQAQTPGAQEAP---KELRALTPYDAVYKTST 58

Query: 529 SGVT 540
           SG++
Sbjct: 59  SGLS 62


>tr|Q9XWX3|Q9XWX3_CAEEL Putative uncharacterized protein scl-21
           OS=Caenorhabditis elegans GN=scl-21 PE=2 SV=1
          Length = 198

 Score = 34.7 bits (78), Expect = 5.5
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = -1

Query: 134 SPCHIFLAGRR----VFSLEHQTGFTQNVFLSSGRRCKACPANS 15
           SPC I   GRR    V S E + G T+      G+ C+ACPA +
Sbjct: 145 SPCEIDSQGRRWYKVVCSFEKKGGITREPVYKKGKACEACPAGT 188


>tr|Q7PMS0|Q7PMS0_ANOGA AGAP004795-PA OS=Anopheles gambiae
           GN=AGAP004795 PE=4 SV=4
          Length = 639

 Score = 34.3 bits (77), Expect = 7.1
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +2

Query: 221 GLLFLFEDARCQTRNEWPFFAGMRRQQVRMTRPGNISQPPLA 346
           G+L L  +   + +++WPF++   RQ V+  RP N++ PPL+
Sbjct: 360 GVLILHRNIWNEVQDDWPFYSEQDRQAVKRRRPQNLT-PPLS 400