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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961086
Clone id TST39A01NGRL0009_C15
Library
Length 683
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_C15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AGCAGGCATCGCCACTAGCCGAGCTTCTCTCCAAGCTTAGCACTACATTTCTCTTTCGCG
CCTGCTGCTTGTTCACCTAAGGCTCTTAGCGAGCCAATTCTTAGCTGCGAGCTTCTCATT
GGCAGTATGACAGTTTTCTTGTGGCATCTCTTCTTTCTAATCTCCGATCCCTGAGACACC
GCTCCTTCTAACTGGCCGCTCTTTACATCTGCTCGCTCGATCGCATCACCGTTTTAATTT
CTCCGGCCTCTTGTAAATGAGAGATCAAGGCGGGGGGTTGTTGTTTTCTCCTCCGATTGA
GAGGAAAAAAGTGAGCGTAAAGCTGAGCGGGAGGGAGGAAGGCAATGAATTACCAAGGAG
GCGGCCTGGCTTTGGAGGTGAGAGCAATTATGGGAATGGAGGAGCAAAGATTATGGGAAG
CGTGCTACAGGCGGGGAGATTGAAGGGAGGTAGCTCGATGCCCAGCAACGGCAATGGGGC
AAGGAGTTATAATGAGGAGGTTCACATGGAGCGCTTGTCACCTGTTGCGAAGGCCCCCGA
GGAAGGGCTTCTTCCTCAGTGGGGTCGCGGCAAACGTTCCCGCTGCAGCCGACCTGAGGC
TTCCAATAAGCATGCTCCCTCTCCTCCTCCTGCCCAAGAGTCCTCTGCTCCTCCTCCTAA
CAAGAAGCACCTTTCGAATGGAA
■■Homology search results ■■ -
sp_hit_id Q03249
Definition sp|Q03249|GALT_MOUSE Galactose-1-phosphate uridylyltransferase OS=Mus musculus
Align length 24
Score (bit) 32.7
E-value 1.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961086|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_C15, 5'
         (669 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q03249|GALT_MOUSE Galactose-1-phosphate uridylyltransferase O...    33   1.8  
sp|P07902|GALT_HUMAN Galactose-1-phosphate uridylyltransferase O...    33   1.8  
sp|O94479|YC6C_SCHPO Uncharacterized zinc metallopeptidase C1919...    33   1.8  
sp|P43424|GALT_RAT Galactose-1-phosphate uridylyltransferase OS=...    32   4.0  
sp|Q96M02|CJ090_HUMAN Uncharacterized protein C10orf90 OS=Homo s...    32   4.0  
sp|Q86WI1|PKHL1_HUMAN Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 P...    32   4.0  
sp|Q9F7B2|WZB_SALTY Low molecular weight protein-tyrosine-phosph...    30   8.8  
sp|Q8Z5G5|WZB_SALTI Low molecular weight protein-tyrosine-phosph...    30   8.8  

>sp|Q03249|GALT_MOUSE Galactose-1-phosphate uridylyltransferase
           OS=Mus musculus GN=Galt PE=2 SV=3
          Length = 379

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 492 CEPPHYNSLPHCRCWASSYLPSIS 421
           C  PH    PHC+ WASS+LP I+
Sbjct: 180 CSNPH----PHCQVWASSFLPDIA 199


>sp|P07902|GALT_HUMAN Galactose-1-phosphate uridylyltransferase
           OS=Homo sapiens GN=GALT PE=1 SV=3
          Length = 379

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 492 CEPPHYNSLPHCRCWASSYLPSIS 421
           C  PH    PHC+ WASS+LP I+
Sbjct: 180 CSNPH----PHCQVWASSFLPDIA 199


>sp|O94479|YC6C_SCHPO Uncharacterized zinc metallopeptidase
           C1919.12c OS=Schizosaccharomyces pombe GN=SPCC1919.12c
           PE=2 SV=1
          Length = 843

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +2

Query: 23  LALHFSFAPAACSPKALSEPILSCELLIGSMTVFLWHLFFLIS 151
           +AL FSF  AA   K  SE + S E++       LW+L F++S
Sbjct: 432 IALAFSFRAAATHSKLSSEDLSSIEIVFIWYAQILWYLVFIVS 474


>sp|P43424|GALT_RAT Galactose-1-phosphate uridylyltransferase
           OS=Rattus norvegicus GN=Galt PE=2 SV=1
          Length = 379

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 492 CEPPHYNSLPHCRCWASSYLPSIS 421
           C  PH    PHC+ WAS++LP I+
Sbjct: 180 CSNPH----PHCQVWASNFLPDIA 199


>sp|Q96M02|CJ090_HUMAN Uncharacterized protein C10orf90 OS=Homo
           sapiens GN=C10orf90 PE=2 SV=2
          Length = 699

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 22/87 (25%), Positives = 35/87 (40%)
 Frame = -1

Query: 291 SSQSEEKTTTPRLDLSFTRGRRN*NGDAIERADVKSGQLEGAVSQGSEIRKKRCHKKTVI 112
           S    E   TP   L+            I R+  +  +LE  V Q    RK+   +K  +
Sbjct: 556 SEDCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSL 615

Query: 111 LPMRSSQLRIGSLRALGEQAAGAKEKC 31
           LP+R+S+ +      L +     KE+C
Sbjct: 616 LPIRTSKKQFTIPHPLSDNLFKPKERC 642


>sp|Q86WI1|PKHL1_HUMAN Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2
            SV=1
          Length = 4243

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 11   FSPSLALHFSFAPAACSPKALSEPILSCELLIGS 112
            FSPS A+  S  P  CS  ++ E  L C++L GS
Sbjct: 1092 FSPSSAVTVSVGPVGCSLLSVDEKELKCQILNGS 1125


>sp|Q9F7B2|WZB_SALTY Low molecular weight
           protein-tyrosine-phosphatase wzb OS=Salmonella
           typhimurium GN=wzb PE=3 SV=1
          Length = 149

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 579 VGCSGNVCRDPTEEEALPR-GPSQQVTSA 496
           V C GNVCR PT E  L R  PS  V SA
Sbjct: 7   VVCVGNVCRSPTAERLLKRFHPSLTVASA 35


>sp|Q8Z5G5|WZB_SALTI Low molecular weight
           protein-tyrosine-phosphatase wzb OS=Salmonella typhi
           GN=wzb PE=3 SV=1
          Length = 149

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 579 VGCSGNVCRDPTEEEALPR-GPSQQVTSA 496
           V C GNVCR PT E  L R  PS  V SA
Sbjct: 7   VVCVGNVCRSPTAERLLKRFHPSLTVASA 35
tr_hit_id Q9VB21
Definition tr|Q9VB21|Q9VB21_DROME CG5639 OS=Drosophila melanogaster
Align length 44
Score (bit) 35.8
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961086|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_C15, 5'
         (669 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9VB21|Q9VB21_DROME CG5639 OS=Drosophila melanogaster GN=CG56...    36   2.5  
tr|Q8MST1|Q8MST1_DROME LP11788p OS=Drosophila melanogaster GN=CG...    36   2.5  
tr|B3P5Z9|B3P5Z9_DROER GG12107 OS=Drosophila erecta GN=GG12107 P...    36   2.5  
tr|B4PRC6|B4PRC6_DROYA GE10556 OS=Drosophila yakuba GN=GE10556 P...    35   3.3  
tr|B4KBA2|B4KBA2_DROMO GI10752 OS=Drosophila mojavensis GN=GI107...    35   3.3  
tr|B3LXJ1|B3LXJ1_DROAN GF18704 OS=Drosophila ananassae GN=GF1870...    35   3.3  
tr|B7YJV9|B7YJV9_VARPD AMP-dependent synthetase and ligase OS=Va...    35   5.6  
tr|B4QXH9|B4QXH9_DROSI GD18072 OS=Drosophila simulans GN=GD18072...    35   5.6  
tr|A8IXH7|A8IXH7_CHLRE Predicted protein (Fragment) OS=Chlamydom...    34   9.5  
tr|Q7QAA3|Q7QAA3_ANOGA AGAP004333-PA (Fragment) OS=Anopheles gam...    34   9.5  

>tr|Q9VB21|Q9VB21_DROME CG5639 OS=Drosophila melanogaster GN=CG5639
           PE=1 SV=1
          Length = 1511

 Score = 35.8 bits (81), Expect = 2.5
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 585 PQVGCSGNVCRDPTEEEALPRGPSQQVTSAPCEPPHYNSLPHCR 454
           P  GCS   CRDP +    PRG S Q+    C+      LP C+
Sbjct: 128 PDTGCSVCRCRDPCDGLECPRGQSCQLQEVQCKSEPCPPLPTCK 171


>tr|Q8MST1|Q8MST1_DROME LP11788p OS=Drosophila melanogaster
           GN=CG5639 PE=2 SV=1
          Length = 1394

 Score = 35.8 bits (81), Expect = 2.5
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 585 PQVGCSGNVCRDPTEEEALPRGPSQQVTSAPCEPPHYNSLPHCR 454
           P  GCS   CRDP +    PRG S Q+    C+      LP C+
Sbjct: 11  PDTGCSVCRCRDPCDGLECPRGQSCQLQEVQCKSEPCPPLPTCK 54


>tr|B3P5Z9|B3P5Z9_DROER GG12107 OS=Drosophila erecta GN=GG12107 PE=4
           SV=1
          Length = 1509

 Score = 35.8 bits (81), Expect = 2.5
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 585 PQVGCSGNVCRDPTEEEALPRGPSQQVTSAPCEPPHYNSLPHCR 454
           P  GCS   CRDP +    PRG S Q+    C+      LP C+
Sbjct: 128 PDTGCSVCRCRDPCDGLECPRGQSCQLQEVQCKSEPCPPLPTCK 171


>tr|B4PRC6|B4PRC6_DROYA GE10556 OS=Drosophila yakuba GN=GE10556 PE=4
           SV=1
          Length = 1511

 Score = 35.4 bits (80), Expect = 3.3
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 585 PQVGCSGNVCRDPTEEEALPRGPSQQVTSAPCEPPHYNSLPHCR 454
           P  GCS   CRDP +    PRG S Q+    C+      LP C+
Sbjct: 128 PDTGCSVCRCRDPCDGLECPRGQSCQLHEVQCKSEPCPPLPTCK 171


>tr|B4KBA2|B4KBA2_DROMO GI10752 OS=Drosophila mojavensis GN=GI10752
           PE=4 SV=1
          Length = 1521

 Score = 35.4 bits (80), Expect = 3.3
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 585 PQVGCSGNVCRDPTEEEALPRGPSQQVTSAPCEPPHYNSLPHCR 454
           P+ GCS   CRDP +    PRG + Q+    C+      LP C+
Sbjct: 129 PETGCSVCRCRDPCDGLECPRGQTCQLQEVQCKSEPCPPLPTCK 172


>tr|B3LXJ1|B3LXJ1_DROAN GF18704 OS=Drosophila ananassae GN=GF18704
           PE=4 SV=1
          Length = 1521

 Score = 35.4 bits (80), Expect = 3.3
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 585 PQVGCSGNVCRDPTEEEALPRGPSQQVTSAPCEPPHYNSLPHCR 454
           P+ GCS   CRDP +    PRG + Q+    C+      LP C+
Sbjct: 132 PETGCSVCRCRDPCDGLECPRGQTCQLQEVQCKSEPCPPLPTCK 175


>tr|B7YJV9|B7YJV9_VARPD AMP-dependent synthetase and ligase
           OS=Variovorax paradoxus S110 GN=VaparDRAFT_1384 PE=4
           SV=1
          Length = 535

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = -1

Query: 336 IHCLPPSRSALRSLFSSQSEEKTTTPRLDLSFTRGRRN*NGDAIERADVKSGQLEGA-VS 160
           +  LPP +  L ++   QSE     P L ++   GR+  +GDA E A V++G L  A V+
Sbjct: 5   VRALPPDQRTLPAMLQRQSERFAGRPLLRIA---GRQWTHGDAAEAAAVRAGALAAAGVA 61

Query: 159 QGSEI 145
           +G  I
Sbjct: 62  RGDRI 66


>tr|B4QXH9|B4QXH9_DROSI GD18072 OS=Drosophila simulans GN=GD18072
           PE=4 SV=1
          Length = 1511

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 585 PQVGCSGNVCRDPTEEEALPRGPSQQVTSAPCEPPHYNSLPHCR 454
           P  GCS   CRDP +    PRG S Q+    C+      +P C+
Sbjct: 128 PDTGCSVCRCRDPCDGLECPRGQSCQLQEVQCKSEPCPPVPTCK 171


>tr|A8IXH7|A8IXH7_CHLRE Predicted protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_172839 PE=4
           SV=1
          Length = 5234

 Score = 33.9 bits (76), Expect = 9.5
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = -1

Query: 534 ALPRGPSQQVTSAPCEPPHYNSLPHCRCWASSYLP-----SISPPVARFP 400
           AL R   +Q T     PPH++S P C CW   Y+P     S S  V R P
Sbjct: 123 ALRRWRQEQETELCALPPHFDS-PDCGCWRCCYIPDEDGDSWSSAVTRVP 171


>tr|Q7QAA3|Q7QAA3_ANOGA AGAP004333-PA (Fragment) OS=Anopheles
           gambiae GN=AGAP004333 PE=4 SV=4
          Length = 1561

 Score = 33.9 bits (76), Expect = 9.5
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -1

Query: 576 GCSGNVCRDPTEEEALPRGPSQQVTSAPCEPPHYNSLPHCRCWASSYLPSISP 418
           GC    CRDP E+   PRG   +     C+      +P C+C  +  L  + P
Sbjct: 135 GCPICRCRDPCEDIQCPRGQQCEPQEVQCKTEPCPPIPTCKCRKARSLNDLCP 187