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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961087
Clone id TST39A01NGRL0009_C16
Library
Length 650
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_C16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGCTATCGGTGTCCGTGTTGCCTTGTCTACCCGTGCCAGCAGCATGCTGCAGGAGCAGG
ACCCACGTCCGCCGCATTTCTTCCATCAAACTTAGCAGCCATGGATTGTCCACGAATTAT
TCATGCACACGTGCAGCACGTTCCCGGAGAGCAGTAATGCCAGTGCGTGCTGATGGTTCC
CTATCTGAGCTAACACCTACTGTTGCAGCTGTTTATGGAAGCCTTCTTTTGGGTGGTGGT
CTCTTTGCCTATACTACAAGTTCAAGCAAAGGCTCTTTGTTGGGAGGGTTGAGTGGAGGA
GCTTTAATGGGTCTGGTGTATCTCTTGTCTTTGGATCCCTATATGAAAGACCTAGGCGAG
GCTATCGGGTTCTGTACCGCTCTCCTTTTTGTAGCTGTATTTGGTATTCGTTTTGCTGCA
ACAAAGAAGGTATTTCCGGCAGCCCCATTGTTGTTGGGAAGCGTGGTTGCTTCAGCAGTT
TTCGTGGGTGCCTATATACAGGATAGAGTCTGAAAATGCTGAACCTCTATGGAGGGTAGA
TCATGGGATGCTTCAGTGTTCAGTTTTGTCGAGTGTTAACACTAGCATTTCCAACAAGAT
GTTTTCTTCACTATGGAGATACCCATTAACTAAATGACTTTGGGCCAACA
■■Homology search results ■■ -
sp_hit_id Q10284
Definition sp|Q10284|HSP75_SCHPO Heat shock protein sks2 OS=Schizosaccharomyces pombe
Align length 51
Score (bit) 30.8
E-value 6.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961087|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_C16, 5'
         (650 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q10284|HSP75_SCHPO Heat shock protein sks2 OS=Schizosaccharom...    31   6.4  
sp|P71398|LSG4_HAEIN Lsg locus putative protein 4 OS=Haemophilus...    30   8.4  
sp|Q66IV1|CK009_XENLA Uncharacterized protein C11orf9 homolog OS...    30   8.4  

>sp|Q10284|HSP75_SCHPO Heat shock protein sks2
           OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2
          Length = 613

 Score = 30.8 bits (68), Expect = 6.4
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -1

Query: 509 TLSCI*APTKTAEATTLPNNNGAAGNTFFVA---AKRIPNTATKRRAVQNP 366
           T SC+ A  +TA    +PN+ GA     FVA    +R+   A K +A  NP
Sbjct: 16  TYSCV-AVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65


>sp|P71398|LSG4_HAEIN Lsg locus putative protein 4 OS=Haemophilus
           influenzae GN=HI1697 PE=3 SV=1
          Length = 257

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = +2

Query: 425 RRYFRQPHCCWEAWLLQQFS-WVPIYRIESENAEPLWRVDHGMLQCSVLSSVNTSISNKM 601
           RR+ +Q       WL   F  +   + I ++   PL  +++ +L  S L SV  S+SN +
Sbjct: 178 RRFIQQISQNKPFWLADDFLLFEQNFNIRNKVVRPLIVIENPVL-ISNLESVRGSLSNNL 236

Query: 602 FSSLWRYPLTK 634
              L +YPL K
Sbjct: 237 LKKLMKYPLKK 247


>sp|Q66IV1|CK009_XENLA Uncharacterized protein C11orf9 homolog
           OS=Xenopus laevis PE=2 SV=1
          Length = 1092

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 57  QDPRPPHFFHQT*QPWIVHELFMHTCSTFPESSN 158
           Q P PPH  HQ   P +  EL+M   S  P+  N
Sbjct: 200 QGPLPPHSIHQQHYPSMQRELYMKVESMMPQYQN 233
tr_hit_id B7FAK3
Definition tr|B7FAK3|B7FAK3_ORYSJ cDNA, clone: J100080N01, full insert sequence OS=Oryza sativa subsp. japonica
Align length 127
Score (bit) 72.0
E-value 3.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961087|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_C16, 5'
         (650 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FAK3|B7FAK3_ORYSJ cDNA, clone: J100080N01, full insert sequ...    72   3e-11
tr|Q01KJ0|Q01KJ0_ORYSA H0404F02.7 protein OS=Oryza sativa GN=H04...    71   7e-11
tr|A2XWP4|A2XWP4_ORYSI Putative uncharacterized protein OS=Oryza...    71   7e-11
tr|Q8LKP7|Q8LKP7_SAUME Putative uncharacterized protein OS=Sauss...    69   2e-10
tr|A9SPY7|A9SPY7_PHYPA Predicted protein OS=Physcomitrella paten...    67   7e-10
tr|A9PIA0|A9PIA0_POPTR Putative uncharacterized protein OS=Popul...    66   2e-09
tr|Q9C880|Q9C880_ARATH Protein kinase, putative OS=Arabidopsis t...    64   6e-09
tr|Q8LPG1|Q8LPG1_ARATH Protein kinase, putative OS=Arabidopsis t...    64   6e-09
tr|Q7XQ86|Q7XQ86_ORYSJ Os04g0577800 protein OS=Oryza sativa subs...    63   2e-08
tr|B6TKU2|B6TKU2_MAIZE Protein kinase OS=Zea mays PE=2 SV=1            60   1e-07
tr|A7QIZ3|A7QIZ3_VITVI Chromosome chr2 scaffold_105, whole genom...    59   3e-07
tr|A3AWN5|A3AWN5_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.032
tr|Q54R79|Q54R79_DICDI Putative uncharacterized protein OS=Dicty...    36   1.8  
tr|B4M629|B4M629_DROVI GJ10464 OS=Drosophila virilis GN=GJ10464 ...    35   5.2  
tr|B2FIF6|B2FIF6_STRMK Putative uncharacterized protein OS=Steno...    34   6.7  
tr|B7QIL4|B7QIL4_IXOSC Putative uncharacterized protein OS=Ixode...    34   6.7  
tr|B4M181|B4M181_DROVI GJ24175 OS=Drosophila virilis GN=GJ24175 ...    34   8.8  
tr|B4KB99|B4KB99_DROMO GI22014 OS=Drosophila mojavensis GN=GI220...    34   8.8  

>tr|B7FAK3|B7FAK3_ORYSJ cDNA, clone: J100080N01, full insert
           sequence OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 160

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 46/127 (36%), Positives = 60/127 (47%)
 Frame = +1

Query: 130 RAARSRRAVMPVRADGSLSELTPTVAAVYGSLLLGGGLFAYTTXXXXXXXXXXXXXXXXX 309
           R  RSRR  + +R   ++SEL PT +A YG+LLLGGG FAY                   
Sbjct: 36  RPGRSRRRAL-LRCS-AVSELAPTASAAYGALLLGGGAFAYVRSGSKGSIFGGLSGSALM 93

Query: 310 XXVYLLSLDPYMKDLGEAIGFCTALLFVAVFGIRFAATKKVFXXXXXXXXXXXXXXXXXX 489
              Y L   P  K LG+A+GF +A LF +VFGIR   T+K+                   
Sbjct: 94  GIAYYLMQSPETKALGDAVGFGSAFLFASVFGIRLYNTRKLVPSGLLLVLSLGALGVFYS 153

Query: 490 XYIQDRV 510
            Y+QD+V
Sbjct: 154 AYMQDKV 160


>tr|Q01KJ0|Q01KJ0_ORYSA H0404F02.7 protein OS=Oryza sativa
           GN=H0404F02.7 PE=4 SV=1
          Length = 160

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 46/127 (36%), Positives = 59/127 (46%)
 Frame = +1

Query: 130 RAARSRRAVMPVRADGSLSELTPTVAAVYGSLLLGGGLFAYTTXXXXXXXXXXXXXXXXX 309
           R  RSRR  + +R   ++SEL PT +A YG LLLGGG FAY                   
Sbjct: 36  RPGRSRRRAL-LRCS-AVSELAPTASAAYGVLLLGGGAFAYVRSGSKGSIFGGLSGSALM 93

Query: 310 XXVYLLSLDPYMKDLGEAIGFCTALLFVAVFGIRFAATKKVFXXXXXXXXXXXXXXXXXX 489
              Y L   P  K LG+A+GF +A LF +VFGIR   T+K+                   
Sbjct: 94  GIAYYLMQSPETKALGDAVGFGSAFLFASVFGIRLYNTRKLVPSGLLLVLSLGALGVFYS 153

Query: 490 XYIQDRV 510
            Y+QD+V
Sbjct: 154 AYMQDKV 160


>tr|A2XWP4|A2XWP4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_17074 PE=4 SV=1
          Length = 160

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 46/127 (36%), Positives = 59/127 (46%)
 Frame = +1

Query: 130 RAARSRRAVMPVRADGSLSELTPTVAAVYGSLLLGGGLFAYTTXXXXXXXXXXXXXXXXX 309
           R  RSRR  + +R   ++SEL PT +A YG LLLGGG FAY                   
Sbjct: 36  RPGRSRRRAL-LRCS-AVSELAPTASAAYGVLLLGGGAFAYVRSGSKGSIFGGLSGSALM 93

Query: 310 XXVYLLSLDPYMKDLGEAIGFCTALLFVAVFGIRFAATKKVFXXXXXXXXXXXXXXXXXX 489
              Y L   P  K LG+A+GF +A LF +VFGIR   T+K+                   
Sbjct: 94  GIAYYLMQSPETKALGDAVGFGSAFLFASVFGIRLYNTRKLVPSGLLLVLSLGALGVFYS 153

Query: 490 XYIQDRV 510
            Y+QD+V
Sbjct: 154 AYMQDKV 160


>tr|Q8LKP7|Q8LKP7_SAUME Putative uncharacterized protein
           OS=Saussurea medusa PE=2 SV=1
          Length = 189

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 45/154 (29%), Positives = 63/154 (40%)
 Frame = +1

Query: 49  CRSRTHVRRISSIKLSSHGLSTNYSCTRAARSRRAVMPVRADGSLSELTPTVAAVYGSLL 228
           C+ R  +RR+SS   SS   +T+   ++  +               +  P  +A Y  LL
Sbjct: 51  CKIRQRLRRLSSFPSSSRSFTTHLCKSQLVQ---------------DFAPAASAGYAVLL 95

Query: 229 LGGGLFAYTTXXXXXXXXXXXXXXXXXXXVYLLSLDPYMKDLGEAIGFCTALLFVAVFGI 408
           LGGGLFAY                      Y L   P  K+ G+A+ F  +LLF  +FGI
Sbjct: 96  LGGGLFAYNKSGSKGSLFGGLTGAALLSIAYYLMQAPETKETGDALAFGASLLFACIFGI 155

Query: 409 RFAATKKVFXXXXXXXXXXXXXXXXXXXYIQDRV 510
           R AAT+KV                    Y+QDR+
Sbjct: 156 RLAATRKVIPAGFLLGLSISLTAVTYSAYLQDRI 189


>tr|A9SPY7|A9SPY7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_166098 PE=4 SV=1
          Length = 221

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 36/84 (42%), Positives = 46/84 (54%)
 Frame = +1

Query: 178 SLSELTPTVAAVYGSLLLGGGLFAYTTXXXXXXXXXXXXXXXXXXXVYLLSLDPYMKDLG 357
           SL++  P  AAVYG+ LLGGGL+AYT                     + L   P  +DLG
Sbjct: 71  SLNDYAPLTAAVYGASLLGGGLYAYTRTGSTSSLGGGITGGIALGVAFFLMQVPETRDLG 130

Query: 358 EAIGFCTALLFVAVFGIRFAATKK 429
           EA+GF  A+LF A+F IR A+T K
Sbjct: 131 EAVGFGAAVLFAAIFAIRLASTGK 154


>tr|A9PIA0|A9PIA0_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 175

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
 Frame = +1

Query: 112 TNYSCTRAARSRRAVMPVRADG-------SLSELTPTVAAVYGSLLLGGGLFAYTTXXXX 270
           +++SC R  R   ++    + G        L+++ P  +A YG +LLGGGLFA++     
Sbjct: 31  SSFSCLRNRRRSNSIATSFSRGRSLGCKCQLADIAPVTSAAYGVILLGGGLFAFSKSGSK 90

Query: 271 XXXXXXXXXXXXXXXVYLLSLDPYMKDLGEAIGFCTALLFVAVFGIRFAATKKVFXXXXX 450
                           Y L   P  K +G+++GF +A LF +VFGIR AAT+K+      
Sbjct: 91  GSLFGGLTGAAVMGTAYFLMQAPETKAIGDSLGFGSAFLFSSVFGIRLAATQKLIPSGLL 150

Query: 451 XXXXXXXXXXXXXXYIQD 504
                         Y+QD
Sbjct: 151 LGLSICALAVFIAAYLQD 168


>tr|Q9C880|Q9C880_ARATH Protein kinase, putative OS=Arabidopsis
           thaliana GN=T16O9.6 PE=4 SV=1
          Length = 528

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 35/83 (42%), Positives = 44/83 (53%)
 Frame = +1

Query: 181 LSELTPTVAAVYGSLLLGGGLFAYTTXXXXXXXXXXXXXXXXXXXVYLLSLDPYMKDLGE 360
           LSEL P V+A YG LLLGGGLFAY+                     Y L+  P  + LG+
Sbjct: 407 LSELAPVVSATYGVLLLGGGLFAYSKSGSKGSLFGGLTGSVLMASAYFLTKSPETRVLGD 466

Query: 361 AIGFCTALLFVAVFGIRFAATKK 429
            IG   A LF +VFG R A+++K
Sbjct: 467 TIGLGAAFLFSSVFGFRLASSRK 489


>tr|Q8LPG1|Q8LPG1_ARATH Protein kinase, putative OS=Arabidopsis
           thaliana GN=At1g33260 PE=2 SV=1
          Length = 177

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 35/83 (42%), Positives = 44/83 (53%)
 Frame = +1

Query: 181 LSELTPTVAAVYGSLLLGGGLFAYTTXXXXXXXXXXXXXXXXXXXVYLLSLDPYMKDLGE 360
           LSEL P V+A YG LLLGGGLFAY+                     Y L+  P  + LG+
Sbjct: 56  LSELAPVVSATYGVLLLGGGLFAYSKSGSKGSLFGGLTGSVLMASAYFLTKSPETRVLGD 115

Query: 361 AIGFCTALLFVAVFGIRFAATKK 429
            IG   A LF +VFG R A+++K
Sbjct: 116 TIGLGAAFLFSSVFGFRLASSRK 138


>tr|Q7XQ86|Q7XQ86_ORYSJ Os04g0577800 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0011J08.3 PE=4 SV=1
          Length = 173

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 46/140 (32%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
 Frame = +1

Query: 130 RAARSRRAVMPVRADGSLSELTPTVAAVYGSLLLGGGLFAY-------------TTXXXX 270
           R  RSRR  + +R   ++SEL PT +A YG+LLLGGG FAY             +     
Sbjct: 36  RPGRSRRRAL-LRCS-AVSELAPTASAAYGALLLGGGAFAYVRSGSKGSIFGGLSGSALM 93

Query: 271 XXXXXXXXXXXXXXXVYLLSLDPYMKDLGEAIGFCTALLFVAVFGIRFAATKKVFXXXXX 450
                           Y L   P  K LG+A+GF +A LF +VFGIR   T+K+      
Sbjct: 94  GISFIGLLGGQNRILAYYLMQSPETKALGDAVGFGSAFLFASVFGIRLYNTRKLVPSGLL 153

Query: 451 XXXXXXXXXXXXXXYIQDRV 510
                         Y+QD+V
Sbjct: 154 LVLSLGALGVFYSAYMQDKV 173


>tr|B6TKU2|B6TKU2_MAIZE Protein kinase OS=Zea mays PE=2 SV=1
          Length = 153

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 35/111 (31%), Positives = 47/111 (42%)
 Frame = +1

Query: 178 SLSELTPTVAAVYGSLLLGGGLFAYTTXXXXXXXXXXXXXXXXXXXVYLLSLDPYMKDLG 357
           ++SE+ P  +A YG LLLGGG FAY                      Y L   P     G
Sbjct: 43  AVSEIAPAASAAYGVLLLGGGAFAYARSGSKGSIYGGLAGAALMGAAYYLMQSPETMAAG 102

Query: 358 EAIGFCTALLFVAVFGIRFAATKKVFXXXXXXXXXXXXXXXXXXXYIQDRV 510
           +A+GF +A LF  VFGIR   ++K+                    Y+QD+V
Sbjct: 103 DAVGFGSAFLFACVFGIRLYNSRKLVPSGLLLALSLGALGVFYSAYLQDKV 153