DK961117 |
Clone id |
TST39A01NGRL0009_D24 |
Library |
TST39 |
Length |
652 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_D24. 5' end sequence. |
Accession |
DK961117 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1156Contig1 |
Sequence |
GGCTACTACTATTTCCCCATGGAAGAAGTTCAGGAACCTAGTTTGGAAAGGGAGCTACCA GACGCCGTTGTTCATGCCATTCTGAGGCGGTGTGATTTTGAAGACGTCTGCCGCTCTGCT TGTGTGGATCGGCGATGGCATCTCATTGCATCAGACGATTCTGTGTGGCAGTGCCTTTGT GAGAAGGATTTTTATCTATTCCAACCTTCTGATCATCACGGAAATATCTGCCCTTCCTAC AAGGAGGCTTACAAGCTCTGGTGCATGAATTTTCGTATGTATCCACGGTCTTTCGTTGTT CGAGCAAAAAGGTGTTGGGATTCTCTGAGGGATTGGACATCTATTAACTATCCAGAAATT GCTCACTCACTTCGGCCAGGTGTTTCAGAAGAAGACCTCAACAATTTTGAGGGGCAGCTT GGTTGGAAGCTCCCATTAGCAGTTCGCGTGCTCTATCGTTTTTGTGGTGGGCAAGATAGA AGTCCACATTTGAACGAAGAGGATGACTCTGATGAGGACAGTGGAGTTGATAGAGATTAC GTGGGCCTGTTTGGTGGTTACAGATTCTATGAGCATAGAGTTGATGTGCATTTTGTTTCC TTGCAGAAGGCTTTGGTGCTGACTGAGCATTTTATACCTCAGTGGGGAGATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9UK99 |
Definition |
sp|Q9UK99|FBX3_HUMAN F-box only protein 3 OS=Homo sapiens |
Align length |
152 |
Score (bit) |
63.2 |
E-value |
1.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B2LUR0 |
Definition |
tr|B2LUR0|B2LUR0_MALDO F-box-containing protein 2 OS=Malus domestica |
Align length |
189 |
Score (bit) |
154.0 |
E-value |
5.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961117|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_D24, 5' (652 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B2LUR0|B2LUR0_MALDO F-box-containing protein 2 OS=Malus domes... 154 5e-36 tr|Q9LND7|Q9LND7_ARATH T21E18.16 protein (Putative uncharacteriz... 153 8e-36 tr|B7FIW9|B7FIW9_MEDTR Putative uncharacterized protein OS=Medic... 149 2e-34 tr|A7QYR3|A7QYR3_VITVI Chromosome chr5 scaffold_253, whole genom... 134 4e-30 tr|Q53LT0|Q53LT0_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 130 7e-29 tr|Q0ITE4|Q0ITE4_ORYSJ Os11g0265200 protein OS=Oryza sativa subs... 130 7e-29 tr|B8BJY9|B8BJY9_ORYSI Putative uncharacterized protein OS=Oryza... 130 7e-29 tr|A9TRI3|A9TRI3_PHYPA Predicted protein OS=Physcomitrella paten... 129 1e-28 tr|Q53LS9|Q53LS9_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 129 2e-28 tr|A7QYR0|A7QYR0_VITVI Chromosome chr5 scaffold_253, whole genom... 127 6e-28 tr|B4FWF3|B4FWF3_MAIZE Putative uncharacterized protein OS=Zea m... 126 1e-27 tr|B4FTG8|B4FTG8_MAIZE Putative uncharacterized protein OS=Zea m... 126 1e-27 tr|A3CAB3|A3CAB3_ORYSJ Putative uncharacterized protein OS=Oryza... 103 7e-21 tr|A2ZD66|A2ZD66_ORYSI Putative uncharacterized protein OS=Oryza... 95 4e-18 tr|Q53LT6|Q53LT6_ORYSJ F-box domain, putative OS=Oryza sativa su... 94 7e-18 tr|Q2R7K1|Q2R7K1_ORYSJ F-box domain containing protein, expresse... 94 7e-18 tr|A8JFX6|A8JFX6_CHLRE Predicted protein OS=Chlamydomonas reinha... 89 2e-16 tr|Q501X3|Q501X3_DANRE F-box protein 3 OS=Danio rerio GN=fbxo3 P... 67 1e-09 tr|B2GUN1|B2GUN1_XENTR LOC100158620 protein (Fragment) OS=Xenopu... 65 4e-09 tr|Q9H0V2|Q9H0V2_HUMAN Putative uncharacterized protein DKFZp564... 65 5e-09 tr|Q86X90|Q86X90_HUMAN F-box protein 3 OS=Homo sapiens GN=FBXO3 ... 63 1e-08 tr|B4E3U2|B4E3U2_HUMAN cDNA FLJ59154, highly similar to F-box on... 63 1e-08 tr|Q6DCC4|Q6DCC4_XENLA Fbxo3-prov protein OS=Xenopus laevis GN=f... 62 2e-08 tr|A6H7H7|A6H7H7_BOVIN FBXO3 protein OS=Bos taurus GN=FBXO3 PE=2... 62 2e-08 tr|Q5RBZ1|Q5RBZ1_PONAB Putative uncharacterized protein DKFZp459... 60 9e-08 tr|B3KY16|B3KY16_HUMAN cDNA FLJ46597 fis, clone THYMU3046360, hi... 59 3e-07 tr|A7RYE8|A7RYE8_NEMVE Predicted protein OS=Nematostella vectens... 58 4e-07 tr|Q59GS0|Q59GS0_HUMAN F-box only protein 3 isoform 1 variant (F... 55 4e-06 tr|B6M3I0|B6M3I0_BRAFL Putative uncharacterized protein OS=Branc... 54 6e-06 tr|Q8C7I0|Q8C7I0_MOUSE Putative uncharacterized protein OS=Mus m... 54 8e-06
>tr|B2LUR0|B2LUR0_MALDO F-box-containing protein 2 OS=Malus domestica PE=2 SV=1 Length = 443
Score = 154 bits (389), Expect = 5e-36 Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 1/189 (0%) Frame = +1
Query: 61 DAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNICPSY 240 D +H IL + ED ++ACV + ASD+S+W C +D +L QP D GN+ PS+ Sbjct: 8 DLALHIILSKLGAEDSAKAACVSTKLRASASDESLWSLFCARDLHLSQPLDPLGNLAPSF 67
Query: 241 KEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFEGQL 420 KE+Y+LW + F+MYP S V R KRCWD +R+W +IN+PE +L+ G SE D+ E L Sbjct: 68 KESYQLWRVTFKMYPWSLVKRVKRCWDKIRNWLTINFPEAVSTLKKGASEADIQEVEKIL 127
Query: 421 GWKLPLAVRVLYRFCGGQD-RSPHLNXXXXXXXXXGVDRDYVGLFGGYRFYEHRVDVHFV 597 KLPL R+LYRF GQ H +GL GGY FY+ V V+ + Sbjct: 128 KVKLPLPTRILYRFHNGQAFEEKHFQNNLVGCP--------LGLIGGYAFYDQLVTVYLM 179
Query: 598 SLQKALVLT 624 L++ ++ T Sbjct: 180 PLRQVVLET 188
>tr|Q9LND7|Q9LND7_ARATH T21E18.16 protein (Putative uncharacterized protein At1g06110) (At1g06110/T21E18_13) OS=Arabidopsis thaliana GN=At1g06110 PE=1 SV=1 Length = 436
Score = 153 bits (387), Expect = 8e-36 Identities = 76/185 (41%), Positives = 110/185 (59%) Frame = +1
Query: 61 DAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNICPSY 240 D V+H +L + E+ R ACV +R + AS++S+W C D + P D HG+ PS+ Sbjct: 8 DLVLHIVLSKIGPENTARVACVSKRLKVSASEESLWSIFCSNDLNISTPLDPHGDPAPSF 67
Query: 241 KEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFEGQL 420 K AY+LW +FRMYP + V R + CWD+L+ W ++N+PE +LR GV+E+DL FE L Sbjct: 68 KRAYQLWRESFRMYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLRKGVTEDDLQEFETSL 127
Query: 421 GWKLPLAVRVLYRFCGGQDRSPHLNXXXXXXXXXGVDRDYVGLFGGYRFYEHRVDVHFVS 600 KLPL R+LYRF GQ+ S G+D +GL GGY Y H V+V+ + Sbjct: 128 KVKLPLPTRLLYRFVDGQELS----------SPNGLDGS-LGLIGGYSAYSHDVNVYLLP 176
Query: 601 LQKAL 615 L++ + Sbjct: 177 LKEVM 181
>tr|B7FIW9|B7FIW9_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 318
Score = 149 bits (375), Expect = 2e-34 Identities = 73/189 (38%), Positives = 104/189 (55%) Frame = +1
Query: 61 DAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNICPSY 240 D +H I+ ED+ R +CV R+ SDDS+W +C ++ L QP DH GN PS+ Sbjct: 8 DLAIHEIMENLKPEDIARISCVSNRFKSFTSDDSLWSKICFRELSLTQPIDHLGNPTPSF 67
Query: 241 KEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFEGQL 420 KEAY+ W F MYP S V R KRCWD+++ W + N+PE +L G SE ++ E L Sbjct: 68 KEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLTNNFPEARETLCEGASEVEIQELEDVL 127
Query: 421 GWKLPLAVRVLYRFCGGQDRSPHLNXXXXXXXXXGVDRDYVGLFGGYRFYEHRVDVHFVS 600 KLPL R+LYRF GQ+ H +G+ GGY FY+H V+V+ + Sbjct: 128 NVKLPLPTRILYRFHNGQEIEKH-------DHDTSTSDISLGIIGGYSFYDHFVNVYLLP 180
Query: 601 LQKALVLTE 627 + + + T+ Sbjct: 181 ISQVIQETQ 189
>tr|A7QYR3|A7QYR3_VITVI Chromosome chr5 scaffold_253, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010297001 PE=4 SV=1 Length = 298
Score = 134 bits (338), Expect = 4e-30 Identities = 72/199 (36%), Positives = 109/199 (54%) Frame = +1
Query: 52 ELPDAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNIC 231 +L D ++AI+ + D +D +CV ++ + AS++S+W C +D L P D G Sbjct: 5 DLGDLAINAIISKLDAKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDPLGKPA 64
Query: 232 PSYKEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFE 411 PS+KE Y+LW +F MYP V R KRCWD L++W S N+P+ +LR G +E ++ E Sbjct: 65 PSFKETYQLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPDADATLRKGATEVEIEALE 124
Query: 412 GQLGWKLPLAVRVLYRFCGGQDRSPHLNXXXXXXXXXGVDRDYVGLFGGYRFYEHRVDVH 591 L KLPL R+LYRFC GQ+ L G +G+ GGY +H V+V Sbjct: 125 NILKVKLPLPTRLLYRFCDGQE----LTEEDVGGTALG---GSLGIMGGYCCNDHLVNVC 177
Query: 592 FVSLQKALVLTEHFIPQWG 648 + L++ ++ T+ Q G Sbjct: 178 LLPLRQVILETKEITDQLG 196
>tr|Q53LT0|Q53LT0_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g16390 PE=4 SV=1 Length = 457
Score = 130 bits (327), Expect = 7e-29 Identities = 69/200 (34%), Positives = 101/200 (50%), Gaps = 1/200 (0%) Frame = +1
Query: 55 LPDAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNICP 234 L + ++ + AC R A DD++W+ C D L P G P Sbjct: 23 LEGLALDTVIAKAGARQAAALACASTRLRDAAGDDALWRRFCADDLALHAPLAPDGRALP 82
Query: 235 SYKEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFEG 414 S+K+AYK+W +F MYP V R K W SL+ W S N+PE +L GVSE + + E Sbjct: 83 SFKDAYKVWLESFGMYPLPLVRRVKIFWSSLKSWLSENFPEAHKTLNKGVSEAQIQSAED 142
Query: 415 QLGWKLPLAVRVLYRFCGGQ-DRSPHLNXXXXXXXXXGVDRDYVGLFGGYRFYEHRVDVH 591 LG+KLPL ++LYRFC GQ S H + ++G+ GGY FY+H ++VH Sbjct: 143 DLGFKLPLPTKLLYRFCNGQLPLSEH--------HHENMRMAHLGIIGGYVFYDHLINVH 194
Query: 592 FVSLQKALVLTEHFIPQWGD 651 L++ + T+ F ++ D Sbjct: 195 LSPLEQIVEETKEFYREFYD 214
>tr|Q0ITE4|Q0ITE4_ORYSJ Os11g0265200 protein OS=Oryza sativa subsp. japonica GN=Os11g0265200 PE=4 SV=1 Length = 495
Score = 130 bits (327), Expect = 7e-29 Identities = 69/200 (34%), Positives = 101/200 (50%), Gaps = 1/200 (0%) Frame = +1
Query: 55 LPDAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNICP 234 L + ++ + AC R A DD++W+ C D L P G P Sbjct: 61 LEGLALDTVIAKAGARQAAALACASTRLRDAAGDDALWRRFCADDLALHAPLAPDGRALP 120
Query: 235 SYKEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFEG 414 S+K+AYK+W +F MYP V R K W SL+ W S N+PE +L GVSE + + E Sbjct: 121 SFKDAYKVWLESFGMYPLPLVRRVKIFWSSLKSWLSENFPEAHKTLNKGVSEAQIQSAED 180
Query: 415 QLGWKLPLAVRVLYRFCGGQ-DRSPHLNXXXXXXXXXGVDRDYVGLFGGYRFYEHRVDVH 591 LG+KLPL ++LYRFC GQ S H + ++G+ GGY FY+H ++VH Sbjct: 181 DLGFKLPLPTKLLYRFCNGQLPLSEH--------HHENMRMAHLGIIGGYVFYDHLINVH 232
Query: 592 FVSLQKALVLTEHFIPQWGD 651 L++ + T+ F ++ D Sbjct: 233 LSPLEQIVEETKEFYREFYD 252
>tr|B8BJY9|B8BJY9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35735 PE=4 SV=1 Length = 457
Score = 130 bits (327), Expect = 7e-29 Identities = 69/200 (34%), Positives = 101/200 (50%), Gaps = 1/200 (0%) Frame = +1
Query: 55 LPDAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNICP 234 L + ++ + AC R A DD++W+ C D L P G P Sbjct: 23 LEGLALDTVIAKAGARQAAALACASTRLRDAAGDDALWRRFCADDLALHAPLAPDGRALP 82
Query: 235 SYKEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFEG 414 S+K+AYK+W +F MYP V R K W SL+ W S N+PE +L GVSE + + E Sbjct: 83 SFKDAYKVWLESFGMYPLPLVRRVKIFWSSLKSWLSENFPEAHKTLNKGVSEAQIQSAED 142
Query: 415 QLGWKLPLAVRVLYRFCGGQ-DRSPHLNXXXXXXXXXGVDRDYVGLFGGYRFYEHRVDVH 591 LG+KLPL ++LYRFC GQ S H + ++G+ GGY FY+H ++VH Sbjct: 143 DLGFKLPLPTKLLYRFCNGQLPLSEH--------HHENMRMAHLGIIGGYVFYDHLINVH 194
Query: 592 FVSLQKALVLTEHFIPQWGD 651 L++ + T+ F ++ D Sbjct: 195 LSPLEQIVEETKEFYREFYD 214
>tr|A9TRI3|A9TRI3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_224718 PE=4 SV=1 Length = 398
Score = 129 bits (325), Expect = 1e-28 Identities = 71/190 (37%), Positives = 104/190 (54%) Frame = +1
Query: 52 ELPDAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNIC 231 +LP A++ +I+ + D R+ACV R W+ S D++W+ C +DF Q D C Sbjct: 3 QLPTALLQSIIAKVSASDCARAACVARFWNQTVSQDALWEPHCRRDFPTIQKLDPLDRPC 62
Query: 232 PSYKEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFE 411 ++KE Y+ W + R++ RS K CWDS+R W N+ E+++SL PG + E+L E Sbjct: 63 STWKETYQSWKTS-RLFQRS-----KLCWDSIRSWARDNFKEVSNSLAPGATLEELAETE 116
Query: 412 GQLGWKLPLAVRVLYRFCGGQDRSPHLNXXXXXXXXXGVDRDYVGLFGGYRFYEHRVDVH 591 L + P A R+LYR C GQ R P V+ YVGL GGY F H V+VH Sbjct: 117 ATLKCRFPPAARLLYRLCNGQ-RIPE-----NVLDDDQVEDHYVGLIGGYNFSHHFVNVH 170
Query: 592 FVSLQKALVL 621 +SL++ + L Sbjct: 171 LLSLRQFIFL 180
>tr|Q53LS9|Q53LS9_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g16390 PE=4 SV=1 Length = 425
Score = 129 bits (324), Expect = 2e-28 Identities = 68/194 (35%), Positives = 98/194 (50%), Gaps = 1/194 (0%) Frame = +1
Query: 55 LPDAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNICP 234 L + ++ + AC R A DD++W+ C D L P G P Sbjct: 23 LEGLALDTVIAKAGARQAAALACASTRLRDAAGDDALWRRFCADDLALHAPLAPDGRALP 82
Query: 235 SYKEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFEG 414 S+K+AYK+W +F MYP V R K W SL+ W S N+PE +L GVSE + + E Sbjct: 83 SFKDAYKVWLESFGMYPLPLVRRVKIFWSSLKSWLSENFPEAHKTLNKGVSEAQIQSAED 142
Query: 415 QLGWKLPLAVRVLYRFCGGQ-DRSPHLNXXXXXXXXXGVDRDYVGLFGGYRFYEHRVDVH 591 LG+KLPL ++LYRFC GQ S H + ++G+ GGY FY+H ++VH Sbjct: 143 DLGFKLPLPTKLLYRFCNGQLPLSEH--------HHENMRMAHLGIIGGYVFYDHLINVH 194
Query: 592 FVSLQKALVLTEHF 633 L++ + T+ F Sbjct: 195 LSPLEQIVEETKEF 208
>tr|A7QYR0|A7QYR0_VITVI Chromosome chr5 scaffold_253, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010293001 PE=4 SV=1 Length = 193
Score = 127 bits (319), Expect = 6e-28 Identities = 60/142 (42%), Positives = 86/142 (60%) Frame = +1
Query: 52 ELPDAVVHAILRRCDFEDVCRSACVDRRWHLIASDDSVWQCLCEKDFYLFQPSDHHGNIC 231 +L D ++AI+ + D +D +CV ++ + AS++S+W C +D L P D G Sbjct: 5 DLGDLAINAIISKLDTKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDPLGKPA 64
Query: 232 PSYKEAYKLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDLNNFE 411 PS+KE Y+LW +F MYP V R KRCWD L++W S N+PE +LR G +E ++ E Sbjct: 65 PSFKETYRLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPEADATLRKGATEVEIEALE 124
Query: 412 GQLGWKLPLAVRVLYRFCGGQD 477 L KLPL R+LYRFC GQ+ Sbjct: 125 NILKVKLPLPTRLLYRFCDGQE 146
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