DK961157 |
Clone id |
TST39A01NGRL0009_F16 |
Library |
TST39 |
Length |
646 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_F16. 5' end sequence. |
Accession |
DK961157 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2534Contig1 |
Sequence |
CGTCGCGAGACCTTACCTTGAGCGAAGGCCCCAACCTTAGCTGCTTCCCGTCATGGCAGC TCCCTCTCCAGCCGCCCTCATGAAGTATCGGCACCTTGGTCGCACCGGCTTGAAGGTTAG CGTGCTCTCTTATGGTGCTTGGGTCAGCTTTGGCAACCAGATCGAAGTGCAAGCTGCCAA GGTCCTGCTTGCAAAATGCCGAGAGTATGGGGTGAACTTCTTTGATAATGCAGAGGTATA TGCCAACGGCAAGGCAGAAGAGATCATGGGGCAGGCCATTAAGGAGCTTCAATGGAAGAG ATCTGATTTAGTCATCTCCACGAAGATTTTCTGGGGCGGCCAAGGCGTGAACGATGTCGG TCTCTCTCGCAAACATATTATTGAGGGTACACAAGCCTGTCTCCGACGCCTGCAGATGGA CTATGTCGATGTGCTCTTTTGTCACAGACCTGACACTAGTACTCCTATCGAGGAGACTGT GCGAGCCATGAACTATGTCATTGACAAGGGTTGGGCCTTCTATTGGGGCACCAGTGAGTG GGATGCCCAACAGATTACTGAAGCCTGGGCAGTTGCCTCCCGTCTTGGCTTGATCGGCCC TGCAGTTGAGCAACCTCAGTACAACCTGCTCGCGCGCGATCGGGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40648 |
Definition |
sp|Q40648|KCAB_ORYSJ Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica |
Align length |
189 |
Score (bit) |
302.0 |
E-value |
9.0e-82 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NK94 |
Definition |
tr|A9NK94|A9NK94_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
189 |
Score (bit) |
325.0 |
E-value |
1.0e-87 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961157|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_F16, 5' (646 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NK94|A9NK94_PICSI Putative uncharacterized protein OS=Picea... 325 1e-87 tr|A9PDE6|A9PDE6_POPTR Putative uncharacterized protein OS=Popul... 321 3e-86 tr|O82064|O82064_SOLTU Putative beta-subunit of K+ channels OS=S... 319 8e-86 tr|A7NXT0|A7NXT0_VITVI Chromosome chr5 scaffold_2, whole genome ... 319 1e-85 tr|O23016|O23016_ARATH T1G11.6 protein (Putative potassium chann... 316 9e-85 tr|A9SIQ5|A9SIQ5_PHYPA Predicted protein OS=Physcomitrella paten... 315 1e-84 tr|B6SGM5|B6SGM5_MAIZE Voltage-gated potassium channel beta subu... 312 1e-83 tr|B4FMY9|B4FMY9_MAIZE Putative uncharacterized protein OS=Zea m... 312 1e-83 tr|Q39151|Q39151_ARATH K+ channel protein OS=Arabidopsis thalian... 311 2e-83 tr|B6T7A1|B6T7A1_MAIZE Voltage-gated potassium channel beta subu... 310 4e-83 tr|A9RRS9|A9RRS9_PHYPA Predicted protein OS=Physcomitrella paten... 309 8e-83 tr|O49847|O49847_9LILI Potassium channel beta subunit (Fragment)... 309 1e-82 tr|Q0DWF3|Q0DWF3_ORYSJ Os02g0817500 protein OS=Oryza sativa subs... 302 1e-80 tr|B8AEU9|B8AEU9_ORYSI Putative uncharacterized protein OS=Oryza... 302 1e-80 tr|A3ACP7|A3ACP7_ORYSJ Putative uncharacterized protein OS=Oryza... 302 1e-80 tr|A8JEQ2|A8JEQ2_CHLRE Predicted protein OS=Chlamydomonas reinha... 272 1e-71 tr|Q27SQ5|Q27SQ5_PROWI Potassium channel beta subunit (Fragment)... 257 4e-67 tr|A9BHF3|A9BHF3_PETMO Aldo/keto reductase OS=Petrotoga mobilis ... 245 1e-63 tr|A6LJC4|A6LJC4_THEM4 Aldo/keto reductase OS=Thermosipho melane... 243 6e-63 tr|Q8H730|Q8H730_PHYIN K+ channel protein OS=Phytophthora infest... 242 1e-62 tr|A4R7X8|A4R7X8_MAGGR Voltage-gated K+ channel subunit beta KCN... 239 1e-61 tr|B7IFL2|B7IFL2_9THEM K+ channel, beta subunit OS=Thermosipho a... 238 3e-61 tr|Q5BFS0|Q5BFS0_EMENI Putative uncharacterized protein OS=Emeri... 238 3e-61 tr|B6HHT2|B6HHT2_PENCH Pc21g18620 protein OS=Penicillium chrysog... 236 7e-61 tr|B8MAH4|B8MAH4_9EURO Voltage-gated K channel beta subunit, put... 235 2e-60 tr|A1D153|A1D153_NEOFI Voltage-gated K+ channel beta subunit (KC... 235 2e-60 tr|B8NWP0|B8NWP0_ASPFL Voltage-gated K+ channel beta subunit (KC... 234 3e-60 tr|B2W8U6|B2W8U6_PYRTR Voltage-gated potassium channel subunit b... 234 3e-60 tr|Q2TWE6|Q2TWE6_ASPOR Voltage-gated shaker-like K+ channel OS=A... 233 7e-60 tr|A8N3Q1|A8N3Q1_COPC7 Putative uncharacterized protein OS=Copri... 233 1e-59
>tr|A9NK94|A9NK94_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 334
Score = 325 bits (834), Expect = 1e-87 Identities = 151/189 (79%), Positives = 172/189 (91%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+Y++LGRTGLKVS LSYGAWVSFGNQ++V+ AK LL CR+YGVNFFDNAEVYANG+AE Sbjct: 7 MQYKNLGRTGLKVSQLSYGAWVSFGNQLDVKEAKGLLQCCRDYGVNFFDNAEVYANGRAE 66
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 EIMGQAIKEL WKRSDLV+STK+FWGG G ND GLSRKHI+EGT+A L+RL MDYVDVLF Sbjct: 67 EIMGQAIKELGWKRSDLVVSTKLFWGGPGPNDKGLSRKHIVEGTKASLKRLDMDYVDVLF 126
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPDTSTPIEETVRAMNYVID+GWAFYWGTSEW+AQQITEAW VA RL ++GP+ EQP+ Sbjct: 127 CHRPDTSTPIEETVRAMNYVIDEGWAFYWGTSEWNAQQITEAWEVAKRLDMVGPSCEQPE 186
Query: 620 YNLLARDRV 646 YNL +R +V Sbjct: 187 YNLFSRHKV 195
>tr|A9PDE6|A9PDE6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 328
Score = 321 bits (822), Expect = 3e-86 Identities = 147/189 (77%), Positives = 171/189 (90%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+Y++LGR+GLKVS LSYGAWVSFGNQ++V+ AK LL CR++GVNFFDNAEVYANG+AE Sbjct: 1 MQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAE 60
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 EIMGQAI+EL WKRSD+V+STKIFWGG G ND GLSRKHI+EGT+A L+RL MDYVDV++ Sbjct: 61 EIMGQAIRELGWKRSDIVVSTKIFWGGSGPNDKGLSRKHILEGTKASLKRLDMDYVDVIY 120
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPDT TPIEETVRAMNYVIDKGWAFYWGTSEW AQQITEAW +A RL L+GP VEQP+ Sbjct: 121 CHRPDTFTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPE 180
Query: 620 YNLLARDRV 646 YN+L+R +V Sbjct: 181 YNMLSRHKV 189
>tr|O82064|O82064_SOLTU Putative beta-subunit of K+ channels OS=Solanum tuberosum GN=kb1 PE=2 SV=1 Length = 330
Score = 319 bits (818), Expect = 8e-86 Identities = 147/189 (77%), Positives = 170/189 (89%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+Y++LGR+GLKVS LSYGAWV+FGNQ++V+ AK LL CR++GVNFFDNAEVYANG+AE Sbjct: 3 MQYKNLGRSGLKVSQLSYGAWVTFGNQLDVKEAKTLLQCCRDHGVNFFDNAEVYANGRAE 62
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 IMGQAI+EL WKRSD+V+STKIFWGG G ND GLSRKHIIEGT+A L+RL MDYVD+++ Sbjct: 63 RIMGQAIRELGWKRSDIVVSTKIFWGGSGPNDKGLSRKHIIEGTKASLKRLDMDYVDLIY 122
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEW AQQITEAW VA RL L+GP VEQP+ Sbjct: 123 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGVAQRLDLVGPIVEQPE 182
Query: 620 YNLLARDRV 646 Y LL+R +V Sbjct: 183 YKLLSRHKV 191
>tr|A7NXT0|A7NXT0_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020464001 PE=4 SV=1 Length = 328
Score = 319 bits (817), Expect = 1e-85 Identities = 149/189 (78%), Positives = 170/189 (89%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+YR+LGR+GLKVS LSYGAWVSFGNQ++V+ AK LL CR+ GVNFFDNAEVYANG+AE Sbjct: 1 MQYRNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDNGVNFFDNAEVYANGRAE 60
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 EIMGQAI+EL WKRSD+V+STKIFWGG G ND GLSRKHIIEGT+A L+RL M+YVDV++ Sbjct: 61 EIMGQAIRELGWKRSDVVVSTKIFWGGSGPNDKGLSRKHIIEGTKASLKRLDMEYVDVIY 120
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPD+STPIEETVRAMNYVID GWAFYWGTSEW AQQITEAW VA RL L+GP VEQP+ Sbjct: 121 CHRPDSSTPIEETVRAMNYVIDHGWAFYWGTSEWSAQQITEAWGVAERLDLVGPIVEQPE 180
Query: 620 YNLLARDRV 646 YNLL+R +V Sbjct: 181 YNLLSRHKV 189
>tr|O23016|O23016_ARATH T1G11.6 protein (Putative potassium channel beta subunit) (Putative K+ channel, beta subunit) OS=Arabidopsis thaliana GN=KV-beta1 PE=2 SV=1 Length = 328
Score = 316 bits (809), Expect = 9e-85 Identities = 144/189 (76%), Positives = 169/189 (89%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+Y++LG++GLKVS LS+GAWV+FGNQ++V+ AK +L CR++GVNFFDNAEVYANG+AE Sbjct: 1 MQYKNLGKSGLKVSTLSFGAWVTFGNQLDVKEAKSILQCCRDHGVNFFDNAEVYANGRAE 60
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 EIMGQAI+EL W+RSD+VISTKIFWGG G ND GLSRKHI+EGT+A L+RL MDYVDVL+ Sbjct: 61 EIMGQAIRELGWRRSDIVISTKIFWGGPGPNDKGLSRKHIVEGTKASLKRLDMDYVDVLY 120
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPD STPIEETVRAMNYVIDKGWAFYWGTSEW AQQITEAW A RL L+GP VEQP+ Sbjct: 121 CHRPDASTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGAADRLDLVGPIVEQPE 180
Query: 620 YNLLARDRV 646 YN+ AR +V Sbjct: 181 YNMFARHKV 189
>tr|A9SIQ5|A9SIQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_185360 PE=4 SV=1 Length = 323
Score = 315 bits (808), Expect = 1e-84 Identities = 150/189 (79%), Positives = 168/189 (88%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+YR+LGRTGLKVSVLSYGAWVSFGNQI V A +L +CR+ GVNFFDNAEVYANGKAE Sbjct: 1 MEYRNLGRTGLKVSVLSYGAWVSFGNQIGVTEAAEILQRCRDAGVNFFDNAEVYANGKAE 60
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 EIMG AIK+L WKRSDLVISTK+FWGG G ND GLSRKHIIEG +A L+RL M YVD+L+ Sbjct: 61 EIMGAAIKQLGWKRSDLVISTKLFWGGNGPNDKGLSRKHIIEGVKASLKRLDMSYVDLLY 120
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPD STPIEETVRAMN+VID+G+AFYWGTSEW AQQITEAW VA RLGLIGPA+EQP+ Sbjct: 121 CHRPDPSTPIEETVRAMNWVIDQGYAFYWGTSEWSAQQITEAWEVAERLGLIGPAMEQPE 180
Query: 620 YNLLARDRV 646 YNLL R++V Sbjct: 181 YNLLVREKV 189
>tr|B6SGM5|B6SGM5_MAIZE Voltage-gated potassium channel beta subunit OS=Zea mays PE=2 SV=1 Length = 329
Score = 312 bits (800), Expect = 1e-83 Identities = 141/189 (74%), Positives = 171/189 (90%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+Y++LGR+GL+VS LSYGAWV+FGNQ++V+ AKVLL CR+ GVNFFDNAEVYANG+AE Sbjct: 1 MQYKNLGRSGLRVSQLSYGAWVTFGNQLDVKEAKVLLQACRDAGVNFFDNAEVYANGRAE 60
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 EIMGQAI++L W+RSD+VISTK+FWGGQG ND GLSRKH++EG + LRRL +DYVDV++ Sbjct: 61 EIMGQAIRDLGWRRSDVVISTKLFWGGQGPNDKGLSRKHVVEGLRGSLRRLALDYVDVVY 120
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPD STP+EETVRAMN+VID+GWAFYWGTSEW AQQITEAWAVA+RL L+GP VEQP+ Sbjct: 121 CHRPDASTPVEETVRAMNWVIDQGWAFYWGTSEWSAQQITEAWAVANRLDLVGPIVEQPE 180
Query: 620 YNLLARDRV 646 YNL +R +V Sbjct: 181 YNLFSRHKV 189
>tr|B4FMY9|B4FMY9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 258
Score = 312 bits (800), Expect = 1e-83 Identities = 141/189 (74%), Positives = 171/189 (90%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+Y++LGR+GL+VS LSYGAWV+FGNQ++V+ AKVLL CR+ GVNFFDNAEVYANG+AE Sbjct: 1 MQYKNLGRSGLRVSQLSYGAWVTFGNQLDVKEAKVLLQACRDAGVNFFDNAEVYANGRAE 60
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 EIMGQAI++L W+RSD+VISTK+FWGGQG ND GLSRKH++EG + LRRL +DYVDV++ Sbjct: 61 EIMGQAIRDLGWRRSDVVISTKLFWGGQGPNDKGLSRKHVVEGLRGSLRRLALDYVDVVY 120
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPD STP+EETVRAMN+VID+GWAFYWGTSEW AQQITEAWAVA+RL L+GP VEQP+ Sbjct: 121 CHRPDASTPVEETVRAMNWVIDQGWAFYWGTSEWSAQQITEAWAVANRLDLVGPIVEQPE 180
Query: 620 YNLLARDRV 646 YNL +R +V Sbjct: 181 YNLFSRHKV 189
>tr|Q39151|Q39151_ARATH K+ channel protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 328
Score = 311 bits (798), Expect = 2e-83 Identities = 142/189 (75%), Positives = 167/189 (88%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+Y++LG++GLKVS LS+GAWV+FGNQ++V+ AK +L CR++GVNFFDNAEVYANG+AE Sbjct: 1 MQYKNLGKSGLKVSTLSFGAWVTFGNQLDVKEAKSILQCCRDHGVNFFDNAEVYANGRAE 60
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 EIMGQAI+EL W+RSD+VISTKIFWGG G ND GLSRKHI+EGT+A L+RL MDYVDVL+ Sbjct: 61 EIMGQAIRELGWRRSDIVISTKIFWGGPGPNDKGLSRKHIVEGTKASLKRLDMDYVDVLY 120
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPD STPIEE VRAMNYVIDKGWAFYWG SEW AQQITEAW A RL L+GP VEQP+ Sbjct: 121 CHRPDASTPIEEAVRAMNYVIDKGWAFYWGISEWSAQQITEAWGAADRLDLVGPIVEQPE 180
Query: 620 YNLLARDRV 646 YN+ AR +V Sbjct: 181 YNMFARHKV 189
>tr|B6T7A1|B6T7A1_MAIZE Voltage-gated potassium channel beta subunit OS=Zea mays PE=2 SV=1 Length = 328
Score = 310 bits (795), Expect = 4e-83 Identities = 140/189 (74%), Positives = 170/189 (89%) Frame = +2
Query: 80 MKYRHLGRTGLKVSVLSYGAWVSFGNQIEVQAAKVLLAKCREYGVNFFDNAEVYANGKAE 259 M+Y++LGR+GL+V LSYGAWV+FGNQ++V+ AK LL CR+ GVNFFDNAEVYANG+AE Sbjct: 1 MQYKNLGRSGLRVXZLSYGAWVTFGNQLDVKEAKALLQACRDAGVNFFDNAEVYANGRAE 60
Query: 260 EIMGQAIKELQWKRSDLVISTKIFWGGQGVNDVGLSRKHIIEGTQACLRRLQMDYVDVLF 439 EIMGQAI++L W+RSD+VISTK+FWGGQG ND GLSRKH++EG +A LRRL MDYVDV++ Sbjct: 61 EIMGQAIRDLGWRRSDVVISTKLFWGGQGPNDKGLSRKHVVEGLRASLRRLDMDYVDVVY 120
Query: 440 CHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWDAQQITEAWAVASRLGLIGPAVEQPQ 619 CHRPD STP+EETVRA+N+VID+GWAFYWGTSEW AQQITEAWAVA+RL L+GP VEQP+ Sbjct: 121 CHRPDASTPVEETVRAINWVIDQGWAFYWGTSEWSAQQITEAWAVANRLDLVGPIVEQPE 180
Query: 620 YNLLARDRV 646 YNL +R +V Sbjct: 181 YNLFSRHKV 189
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