DK961159
Clone id TST39A01NGRL0009_F18
Library
Length 663
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_F18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TGCAGCGTCCAGGTGAAGAAAAATGTCATCCTTGTCTGGTTCTCCTTCAGCAGCTTTAGA
AGCTTCACGTCGTGTGAAATCACATGGTGCCAGAGTTAAAAGACTGGTTGGACTCTAGAG
AAGAGACACAACACAAGCTTCACCAATTGTCAGATCCGCTTTGACAACATGTAACATCGC
TTTGGCAGCTAGATGCTCCGCGGAGCAGCAGACTATCCAGAATCCAGTCTCAACGAAAAG
TCCTACCCAAGCACGGCAAAAGGAGAATCTTCCAAAGCTGGATGACAGTGGACCTGGAGG
TGGACCTGGGCGCGGTGATGATGGCGGCGGAGGCGGAGGCGGAGGTGGTGGAGGCTGGGC
AGGTGGTTTTGCTCTCTGGGGATTTCTTTTGCTACTCTCTTTCATAAAAGAGAAGGAGAA
AGACAAACCCTACAGGCGAGATGCCTTCACCAAGAGCAGGGTGAAGAAAATGCGTGAAGC
TTATTTGTAGCAGTGCACAACATTGTGTTTAAATGATTGTGAGATGTGGTTGGTGTAAGT
TGTCCTCCCGTGGCCTTGTGTGTGCGATGAGTGCTGTAGATAGTGCTCATTAGCAATATA
GCCTCCACTTGTTCTCGCCCTCCATCCAACTGAACGTTGTGATGATTTCATAAAAAGTGA
GGC
■■Homology search results ■■ -
sp_hit_id P51617
Definition sp|P51617|IRAK1_HUMAN Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens
Align length 45
Score (bit) 32.3
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961159|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_F18, 5'
(663 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P51617|IRAK1_HUMAN Interleukin-1 receptor-associated kinase 1... 32 2.3
sp|Q9W349|LOZEN_DROME Protein lozenge OS=Drosophila melanogaster... 30 8.8

>sp|P51617|IRAK1_HUMAN Interleukin-1 receptor-associated kinase 1
OS=Homo sapiens GN=IRAK1 PE=1 SV=2
Length = 712

Score = 32.3 bits (72), Expect = 2.3
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2

Query: 56 LEASRRVKSHGARVKRLVGL*RRDTTQASPIVRSALTTCNIALAA 190
L R VK+HGAR K L L + +A +RS +T LAA
Sbjct: 418 LAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQSTLQAGLAA 462


>sp|Q9W349|LOZEN_DROME Protein lozenge OS=Drosophila melanogaster
GN=lz PE=2 SV=2
Length = 826

Score = 30.4 bits (67), Expect = 8.8
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Frame = -1

Query: 663 ASLFMKSSQRSVGWRARTSGGYIANEHYLQHSSHTQGHGRTTYTNH------ISQSFKHN 502
A + SS SVG + T G H HS HT GH +T +N+ S S +N
Sbjct: 205 AEVLAVSSSASVGSSSPTGGASNGTAHS-GHSGHTGGHSSSTASNNNNNGASNSNSNNNN 263

Query: 501 VVH 493
VH
Sbjct: 264 AVH 266


tr_hit_id A7Q9D6
Definition tr|A7Q9D6|A7Q9D6_VITVI Chromosome chr19 scaffold_66, whole genome shotgun sequence OS=Vitis vinifera
Align length 96
Score (bit) 38.1
E-value 0.49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961159|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_F18, 5'
(663 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7Q9D6|A7Q9D6_VITVI Chromosome chr19 scaffold_66, whole genom... 38 0.49
tr|B6SKR8|B6SKR8_MAIZE Putative uncharacterized protein OS=Zea m... 36 2.4
tr|B6CJY2|B6CJY2_CERTO Interleukin 1 receptor-associated kinase ... 35 4.1
tr|A4HIG6|A4HIG6_LEIBR Zinc-finger protein, conserved OS=Leishma... 34 7.1
tr|B0KWV4|B0KWV4_CALJA Interleukin-1 receptor-associated kinase ... 34 9.2

>tr|A7Q9D6|A7Q9D6_VITVI Chromosome chr19 scaffold_66, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00033432001
PE=4 SV=1
Length = 170

Score = 38.1 bits (87), Expect = 0.49
Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Frame = +2

Query: 152 RSALTTCNIALAARCSAEQ-QTIQNPVSTKSPTQARQKENLPKLDDSXXXXXXXXXXXXX 328
+SA C AL ARC AEQ QT+ ST + + KE P+LDD
Sbjct: 72 QSASLICASALNARCGAEQTQTVTRESSTITIAPTQGKEKSPELDDGGTGFPPRDDGDGG 131

Query: 329 XXXXXXXXXXXXXXXXXXXXXXXSFIKEKEKDKPYR 436
F+K+KE + PYR
Sbjct: 132 GGGGGGGGGWAGGFFFFGFLAFLGFLKDKESEGPYR 167


>tr|B6SKR8|B6SKR8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 145

Score = 35.8 bits (81), Expect = 2.4
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +2

Query: 152 RSALTTCNIALAARCSAEQ-QTI--QNPVSTKSPTQARQKENLPKLDD 286
+ ++ CN AL A+CS Q QT+ ++P T++PT ++K PKLDD
Sbjct: 50 KRSVFACNAALNAKCSQGQTQTVTRESPTITQAPTHGKEKS--PKLDD 95


>tr|B6CJY2|B6CJY2_CERTO Interleukin 1 receptor-associated kinase 1
(Fragment) OS=Cercocebus torquatus atys PE=2 SV=1
Length = 620

Score = 35.0 bits (79), Expect = 4.1
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2

Query: 56 LEASRRVKSHGARVKRLVGL*RRDTTQASPIVRSALTTCNIALAA 190
L A R VK+HGAR+K L L + +A +RS +T LAA
Sbjct: 326 LAAQRAVKTHGARIKYLKDLVEEEAEEAGVALRSTQSTLQAGLAA 370


>tr|A4HIG6|A4HIG6_LEIBR Zinc-finger protein, conserved OS=Leishmania
braziliensis GN=LbrM30_V2.2290 PE=4 SV=1
Length = 1177

Score = 34.3 bits (77), Expect = 7.1
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Frame = -2

Query: 641 HNVQLDGGREQV-EAILLMSTIYS----THRTHKATGGQ--LTPTTSHNHLNTMLCTATN 483
HNV RE V ++++++S I T +H A G Q TP + H+ CT +
Sbjct: 409 HNVGAVRRRESVGDSLVIVSPITPLGAVTAMSHHALGSQEGTTPALAQKHVRAATCTVSE 468

Query: 482 KLHA-FSSPCS 453
LH+ S PCS
Sbjct: 469 SLHSNLSDPCS 479


>tr|B0KWV4|B0KWV4_CALJA Interleukin-1 receptor-associated kinase 1
isoform 1 (Predicted) OS=Callithrix jacchus GN=IRAK1
PE=4 SV=1
Length = 712

Score = 33.9 bits (76), Expect = 9.2
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = +2

Query: 56 LEASRRVKSHGARVKRLVGL*RRDTTQASPIVRSALTTCNIALAARCSAEQQTIQ 220
L R VK HGAR K L L + +A +RS T ALAA A IQ
Sbjct: 419 LAGQRAVKMHGARTKYLKDLVEEEAEEAGVALRSTQTALQAALAADAWATPIAIQ 473