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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961163
Clone id TST39A01NGRL0009_F22
Library
Length 617
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_F22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CACAACTTTGTACAAGAAAGTTGGGTTTTTTTTTTTTTTTTTTTTGGTCCAAGAAAATAC
AAATTGGATTTAAACCTTGTCTTCATGTCTTGATGCTTCTATACAGATCTGAATTCCGGG
CAGGATTGGGAACTTCTCTCCGCCTCAACCTTACTTGCTCAAGGTCATGGATTAGGGTTT
GGGCTACCTCCCCTCACTACTCCTGTATTACACGCCAGTCGTTTAGAAGATGATAGGAGT
TTCCCGTCGAGATGTAGTCTCTGATACAGAACTGGGTTTCATTCTTCGTGGCAAAGATGG
CAGCTCTCTCTCTCTGGACGCTAGCCAGATTGCCATCGTCTGTTCTACTTCTACCTCTTC
TGTCGAGCCTTTTACAGAAGGATGGAAACCCCAGTTTCGAATAGCAGGTGCTTCTTTGCA
GGAGAATTACTATGCCCCGGATCCTTTTGCTCCTGCTGCATCTCATACTGGTAGCTCTCT
CGAACCTTTTCTGGATATGGAACAAAGCTTCCTTGCAGAGCCGACCAGAGCTGCAGATAA
TGAAATGATCAAATTATCAAATGTGGATAAGAATCCAGAGTTTCTTCGAGCTGATTATGC
AGAGAGATGCATGAAGC
■■Homology search results ■■ -
sp_hit_id Q97T80
Definition sp|Q97T80|ZMPC_STRPN Zinc metalloprotease zmpC OS=Streptococcus pneumoniae
Align length 59
Score (bit) 35.0
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961163|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_F22, 5'
         (572 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q97T80|ZMPC_STRPN Zinc metalloprotease zmpC OS=Streptococcus ...    35   0.26 
sp|Q59606|MTF7_NEIGO Modification methylase NgoFVII OS=Neisseria...    32   2.2  
sp|Q5UQ40|UBC4_MIMIV Probable bifunctional E2/E3 enzyme R795 OS=...    31   5.0  
sp|P50641|RIR1_HHV7J Ribonucleoside-diphosphate reductase large ...    31   5.0  
sp|Q9QYY0|GAB1_MOUSE GRB2-associated-binding protein 1 OS=Mus mu...    31   5.0  
sp|Q6UXM1|LRIG3_HUMAN Leucine-rich repeats and immunoglobulin-li...    30   8.5  
sp|Q8VDH1|FBX21_MOUSE F-box only protein 21 OS=Mus musculus GN=F...    30   8.5  

>sp|Q97T80|ZMPC_STRPN Zinc metalloprotease zmpC OS=Streptococcus
            pneumoniae GN=zmpC PE=3 SV=1
          Length = 1856

 Score = 35.0 bits (79), Expect = 0.26
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 377  ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 553
            ENYY  D      +H G+ + P  D E + L       DN++I   + D + E+ R  Y
Sbjct: 1613 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDSREYKRNGY 1671


>sp|Q59606|MTF7_NEIGO Modification methylase NgoFVII OS=Neisseria
           gonorrhoeae GN=ngoFVIIM PE=3 SV=1
          Length = 374

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = +2

Query: 311 SSVEPFTEGWKPQFR----IAGASLQENYYAPDPFAPAASHTGSS-LEPFLDMEQSFLAE 475
           ++V  F E   PQFR    I G  L   +    P  P  + TG + L+P++   Q+    
Sbjct: 156 ANVYNFAEFGVPQFRERVLIVGVRLDTGFDFRHP-EPTHNETGENGLKPYVTAGQAISNI 214

Query: 476 PTRAADNEMIKLSN 517
           P  A++NE++K+S+
Sbjct: 215 PQNASNNELLKISD 228


>sp|Q5UQ40|UBC4_MIMIV Probable bifunctional E2/E3 enzyme R795
           OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R795 PE=3
           SV=1
          Length = 1297

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 352 SNSRCFFAGELLCPGSFCSCCISYW 426
           SN++C  A  + C  SF +CCIS W
Sbjct: 93  SNTKCPIAQSVSCSHSFHACCISRW 117


>sp|P50641|RIR1_HHV7J Ribonucleoside-diphosphate reductase large
           chain OS=Human herpesvirus 7 (strain JI) GN=U28 PE=3
           SV=1
          Length = 806

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 28/98 (28%), Positives = 46/98 (46%)
 Frame = +2

Query: 224 ELGFILRGKDGSSLSLDASQIAIVCSTSTSSVEPFTEGWKPQFRIAGASLQENYYAPDPF 403
           ++GFI R K+    S+   QIA  C  ++  V PF  G    FRIA   L  +Y+  +  
Sbjct: 399 QMGFIFR-KNIHKYSM-LPQIASYCLGNSMDVIPFEYGLNTAFRIA---LNLSYFVENVS 453

Query: 404 APAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSN 517
               SHT  +++ F   ++ F  +  R    E++ + N
Sbjct: 454 EEQKSHT--NIDMFHYRDKIFNLKKMRKTVTELVLIGN 489


>sp|Q9QYY0|GAB1_MOUSE GRB2-associated-binding protein 1 OS=Mus
           musculus GN=Gab1 PE=1 SV=2
          Length = 695

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = +2

Query: 299 STSTSSVEPFTEGWKPQF-----RIAGASLQENYYAPDPFAPAASHTGSSLEP 442
           S  +SS+E F   +K +       ++G  L ENY   +P +P   H+GS  EP
Sbjct: 415 SDRSSSLEGFHSQYKIKSVLTAGGVSGEELDENYVPMNPNSPPRQHSGSFTEP 467


>sp|Q6UXM1|LRIG3_HUMAN Leucine-rich repeats and immunoglobulin-like
           domains protein 3 OS=Homo sapiens GN=LRIG3 PE=2 SV=1
          Length = 1119

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 266 SLDASQIAIVCSTSTSSVEPFTEGWKPQFRIAGASLQENY 385
           ++  S ++ +CS ++SS  P T  WK    +   +  ENY
Sbjct: 510 AIKGSNLSFICSAASSSDSPMTFAWKKDNELLHDAEMENY 549


>sp|Q8VDH1|FBX21_MOUSE F-box only protein 21 OS=Mus musculus
           GN=Fbxo21 PE=2 SV=1
          Length = 627

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 254 GSSLSLDASQIAIVCSTSTSSVEPFTEGWKPQFRIAGASLQENYYAPD 397
           GS  +LD  +++  C       +   + WK QFR+   SL ++Y   D
Sbjct: 45  GSLTALDIGRVSSTCRRLREVCQSSGQVWKEQFRVRWPSLMKHYSPTD 92
tr_hit_id B5E5L7
Definition tr|B5E5L7|B5E5L7_STRP4 Zinc metalloprotease ZmpC OS=Streptococcus pneumoniae serotype 19F (strain G54)
Align length 59
Score (bit) 37.0
E-value 0.78
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961163|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_F22, 5'
         (572 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5E5L7|B5E5L7_STRP4 Zinc metalloprotease ZmpC OS=Streptococcu...    37   0.78 
tr|B2E7B9|B2E7B9_STRPN IgA1 protease OS=Streptococcus pneumoniae...    37   0.78 
tr|A5LXZ4|A5LXZ4_STRPN Immunoglobulin A1 protease OS=Streptococc...    37   0.78 
tr|A5LVE4|A5LVE4_STRPN Immunoglobulin A1 protease OS=Streptococc...    37   0.78 
tr|Q3IXE8|Q3IXE8_RHOS4 Demethylmenaquinone methyltransferase OS=...    35   3.9  
tr|A3PRM0|A3PRM0_RHOS1 Dimethylmenaquinone methyltransferase OS=...    35   3.9  
tr|B8HC40|B8HC40_9MICC Putative secreted lipoprotein OS=Arthroba...    35   3.9  

>tr|B5E5L7|B5E5L7_STRP4 Zinc metalloprotease ZmpC OS=Streptococcus
            pneumoniae serotype 19F (strain G54) GN=zmpC PE=4 SV=1
          Length = 1856

 Score = 37.0 bits (84), Expect = 0.78
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 377  ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 553
            ENYY  D      +H G+ + P  D E + L       DN++I   + D N E+ R  Y
Sbjct: 1613 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDNREYKRNGY 1671


>tr|B2E7B9|B2E7B9_STRPN IgA1 protease OS=Streptococcus pneumoniae
            MLV-016 GN=SPMLV016_0055 PE=4 SV=1
          Length = 1837

 Score = 37.0 bits (84), Expect = 0.78
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 377  ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 553
            ENYY  D      +H G+ + P  D E + L       DN++I   + D N E+ R  Y
Sbjct: 1594 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDNREYKRNGY 1652


>tr|A5LXZ4|A5LXZ4_STRPN Immunoglobulin A1 protease OS=Streptococcus
            pneumoniae SP11-BS70 GN=CGSSp11BS70_07265 PE=4 SV=1
          Length = 1856

 Score = 37.0 bits (84), Expect = 0.78
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 377  ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 553
            ENYY  D      +H G+ + P  D E + L       DN++I   + D N E+ R  Y
Sbjct: 1613 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDNREYKRNGY 1671


>tr|A5LVE4|A5LVE4_STRPN Immunoglobulin A1 protease OS=Streptococcus
           pneumoniae SP9-BS68 GN=CGSSp9BS68_02813 PE=4 SV=1
          Length = 679

 Score = 37.0 bits (84), Expect = 0.78
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 377 ENYYAPDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNVDKNPEFLRADY 553
           ENYY  D      +H G+ + P  D E + L       DN++I   + D N E+ R  Y
Sbjct: 436 ENYYVRDTRHNKDTHAGNKVRPLTDEEVANLTSLNSLIDNDIINRRSYDDNREYKRNGY 494


>tr|Q3IXE8|Q3IXE8_RHOS4 Demethylmenaquinone methyltransferase
           OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 /
           NCIB 8253 / DSM 158) GN=RHOS4_32180 PE=4 SV=1
          Length = 203

 Score = 34.7 bits (78), Expect = 3.9
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -2

Query: 406 SKRIRGIVI--LLQRSTCYSKLGFPSFCKRLDRRGRSRTDDGNLASVQR 266
           ++ + G+VI   ++ S   + LGFP F + LD RG ++TD G L +V R
Sbjct: 91  ARGLAGLVIDGAVRDSAQIADLGFPVFARGLDIRGTTKTDRGQLGAVLR 139


>tr|A3PRM0|A3PRM0_RHOS1 Dimethylmenaquinone methyltransferase
           OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH
           2.4.9) GN=Rsph17029_3908 PE=4 SV=1
          Length = 203

 Score = 34.7 bits (78), Expect = 3.9
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -2

Query: 406 SKRIRGIVI--LLQRSTCYSKLGFPSFCKRLDRRGRSRTDDGNLASVQR 266
           ++ + G+VI   ++ S   + LGFP F + LD RG ++TD G L +V R
Sbjct: 91  ARGLAGLVIDGAVRDSAQIAALGFPVFARGLDIRGTTKTDRGQLGAVLR 139


>tr|B8HC40|B8HC40_9MICC Putative secreted lipoprotein
           OS=Arthrobacter chlorophenolicus A6 GN=Achl_0753 PE=3
           SV=1
          Length = 213

 Score = 34.7 bits (78), Expect = 3.9
 Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
 Frame = +2

Query: 236 ILRGKDGSSLSLDASQIAIVCSTSTSSVEPFTE--------GWKPQFRIAGASLQENYYA 391
           IL+G  G SL+ DA+   I  + +     P T+        GW  Q R   A    NY  
Sbjct: 113 ILKGFPGVSLAADAAGGPIGAAATRDESVPVTDVLLAPGQTGWA-QLRYTQAG---NYMD 168

Query: 392 PDPFAPAASHTGSSLEPFLDMEQSFLAEPTRAADNEMIKLSNV 520
             P   A    G  + P  D E  FLA+PT A  N  IKL  +
Sbjct: 169 CSPVDAA----GYRIYPPEDTESLFLAQPTTACSNADIKLLTI 207