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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961196
Clone id TST39A01NGRL0009_H08
Library
Length 675
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_H08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CATATTCTCTCATTTGCAGGTGTTTTTGTTCCCTGCTCAGACCAACGGTTTATCAGATCA
GGGCTGGTTCTACTTTCCTCTTGTGAAGGACATGGGTGCCGGTCAGAGCCGTGATGGTGA
GCTTCGCTCAGATTCTGAAGAAGAAGAGGAGGAGGAAGAAGACGAACAAGAAATTAAGCA
GAAGTCTGCTGTTTCACCCGCTTCTTCCTCGAAATCCAGCACGCGGCAAAGTTTTGCTTC
TGCAAGCTCCAAGGATGGGCTCCAAAGCATCGGCTCTAAATTCGATTCTCTTACCTTGGC
AGGCAAGCGAGTGGCCAAAGGCCCTCAAAAGGCCAAGCTTTACCGCCATCTTGGAGGTAA
TACACCTAAAGCACAATGGGTTGTTGCGGACAAAGCTGTTTCTTGGGAGTTTACCAGAGA
TGGAGATGATCATGACGAAGATGAAGATGACGACGGGGATGGTGTGAGTGGATCGTGGAA
GACATGGTATCTTTTGGTTGGTAGCAGGGTGAGTGCTCGTGTTGGTGAGAAGCTGCAAGC
AAAATTCTTTGGAGAGCAGCTGCGCGTTGACTTTGTGTACTATGGTGTGTGGGCACTGAA
GTTCTCCACTCGCTTAGAGTTTCAAGACTTTGAGACAGAGTTTCGGAATTGTTTGTTTGA
GAATACCTACATGCT
■■Homology search results ■■ -
sp_hit_id P40781
Definition sp|P40781|CYPR4_CYNCA Protein CYPRO4 OS=Cynara cardunculus
Align length 41
Score (bit) 55.5
E-value 3.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961196|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_H08, 5'
         (675 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P40781|CYPR4_CYNCA Protein CYPRO4 OS=Cynara cardunculus GN=CY...    55   3e-07
sp|Q07E00|CAZA2_ORNAN F-actin-capping protein subunit alpha-2 OS...    32   4.0  
sp|A4D7S9|CAZA2_MACEU F-actin-capping protein subunit alpha-2 OS...    30   9.0  

>sp|P40781|CYPR4_CYNCA Protein CYPRO4 OS=Cynara cardunculus
           GN=CYPRO4 PE=2 SV=1
          Length = 501

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 31/41 (75%)
 Frame = +2

Query: 548 FGEQLRVDFVYYGVWALKFSTRLEFQDFETEFRNCLFENTY 670
           FG+Q RVDFV  GVWALKF    ++++F T F++CLFEN Y
Sbjct: 2   FGDQRRVDFVDSGVWALKFMRDEDYREFVTRFQSCLFENVY 42


>sp|Q07E00|CAZA2_ORNAN F-actin-capping protein subunit alpha-2
           OS=Ornithorhynchus anatinus GN=CAPZA2 PE=3 SV=3
          Length = 286

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 256 WAPKHRL*IRFSYLGRQASGQRPSKGQALPPSWR 357
           W PK+R+  +F +L ++A+  RP + +    SWR
Sbjct: 88  WDPKNRVSFKFDHLRKEATDPRPQEPENAVESWR 121


>sp|A4D7S9|CAZA2_MACEU F-actin-capping protein subunit alpha-2
           OS=Macropus eugenii GN=CAPZA2 PE=3 SV=1
          Length = 286

 Score = 30.4 bits (67), Expect = 9.0
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 262 PKHRL*IRFSYLGRQASGQRPSKGQALPPSWR 357
           PK+R+  +F +L ++A+  RP +G+    SWR
Sbjct: 90  PKNRVSFKFDHLRKEATDPRPCEGENAIESWR 121
tr_hit_id Q9LJK5
Definition tr|Q9LJK5|Q9LJK5_ARATH Dem protein OS=Arabidopsis thaliana
Align length 115
Score (bit) 105.0
E-value 3.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961196|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_H08, 5'
         (675 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LJK5|Q9LJK5_ARATH Dem protein OS=Arabidopsis thaliana GN=At...   105   3e-21
tr|A7NTV6|A7NTV6_VITVI Chromosome chr18 scaffold_1, whole genome...   105   3e-21
tr|A5AH24|A5AH24_VITVI Putative uncharacterized protein OS=Vitis...   105   3e-21
tr|Q6VVW7|Q6VVW7_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=2...   105   3e-21
tr|Q6VVW8|Q6VVW8_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=4...   104   4e-21
tr|A9TTW4|A9TTW4_PHYPA Predicted protein OS=Physcomitrella paten...   103   8e-21
tr|O04394|O04394_SOLLC Dem protein OS=Solanum lycopersicum GN=de...    98   5e-19
tr|B7FFC8|B7FFC8_MEDTR Putative uncharacterized protein (Fragmen...    94   6e-18
tr|Q9SZB7|Q9SZB7_ARATH Dem-like protein OS=Arabidopsis thaliana ...    90   1e-16
tr|Q6ETM2|Q6ETM2_ORYSJ Os02g0178500 protein OS=Oryza sativa subs...    90   1e-16
tr|B6UCN7|B6UCN7_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1            89   2e-16
tr|A9U2M9|A9U2M9_PHYPA Predicted protein OS=Physcomitrella paten...    82   3e-14
tr|B6UDP8|B6UDP8_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1            80   9e-14
tr|B6UBL0|B6UBL0_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1            80   9e-14
tr|A9SNF7|A9SNF7_PHYPA Predicted protein OS=Physcomitrella paten...    74   6e-12
tr|Q6K4M9|Q6K4M9_ORYSJ Os02g0789600 protein OS=Oryza sativa subs...    71   7e-11
tr|A2XAF1|A2XAF1_ORYSI Putative uncharacterized protein OS=Oryza...    71   7e-11
tr|A3AC52|A3AC52_ORYSJ Putative uncharacterized protein OS=Oryza...    61   6e-08
tr|A7P9J1|A7P9J1_VITVI Chromosome chr3 scaffold_8, whole genome ...    55   5e-06
tr|A5BIB3|A5BIB3_VITVI Putative uncharacterized protein OS=Vitis...    37   1.5  
tr|B6MJD4|B6MJD4_BRAFL Putative uncharacterized protein OS=Branc...    36   2.5  
tr|A6DXQ1|A6DXQ1_9RHOB Putative cytochrome P450 OS=Roseovarius s...    35   4.3  

>tr|Q9LJK5|Q9LJK5_ARATH Dem protein OS=Arabidopsis thaliana
           GN=At3g19240 PE=4 SV=1
          Length = 648

 Score =  105 bits (262), Expect = 3e-21
 Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
 Frame = +2

Query: 335 KLYRHLGGNTPKAQWVVADKAVSWEFTRXXXXXXXXXXXXXXXVS---GSWKTWYLLVGS 505
           KLYRH+GGNTPKA+W+V+DK  S++F +                    G    W+L VG+
Sbjct: 90  KLYRHIGGNTPKAKWIVSDKMTSYKFVKTSSVDGEDIDDYDDCEESGEGGESFWFLGVGT 149

Query: 506 RVSARVGEKLQAKFFGEQLRVDFVYYGVWALKFSTRLEFQDFETEFRNCLFENTY 670
           +V ARV   +Q K FG+Q RVDFV  GVWALKF T  +++ F T F++ LFEN Y
Sbjct: 150 KVKARVSTDMQLKMFGDQRRVDFVSNGVWALKFLTDEDYRKFVTRFQDYLFENVY 204


>tr|A7NTV6|A7NTV6_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00014814001
           PE=4 SV=1
          Length = 632

 Score =  105 bits (262), Expect = 3e-21
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
 Frame = +2

Query: 323 PQKAKLYRHLGGNTPKAQWVVADKAVSWEFTRXXXXXXXXXXXXXXXVSG-SWKTWYLLV 499
           P   KLY ++GGNTPKA+WV ++K  S+ F +                 G SW  W L V
Sbjct: 70  PNAVKLYLYIGGNTPKAKWVTSEKLTSYSFLKTCGNGGSDDDEQDDEEGGESW--WILKV 127

Query: 500 GSRVSARVGEKLQAKFFGEQLRVDFVYYGVWALKFSTRLEFQDFETEFRNCLFENTY 670
           GS+V A+V  ++Q K FG+Q RVDFV  GVWA+KF +  E+++F  +F++CLFENTY
Sbjct: 128 GSKVRAKVALEMQLKTFGDQCRVDFVSQGVWAMKFFSEDEYRNFVGKFQDCLFENTY 184


>tr|A5AH24|A5AH24_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_043502 PE=4 SV=1
          Length = 632

 Score =  105 bits (262), Expect = 3e-21
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
 Frame = +2

Query: 323 PQKAKLYRHLGGNTPKAQWVVADKAVSWEFTRXXXXXXXXXXXXXXXVSG-SWKTWYLLV 499
           P   KLY ++GGNTPKA+WV ++K  S+ F +                 G SW  W L V
Sbjct: 70  PNAVKLYLYIGGNTPKAKWVTSEKLTSYSFLKTCGNGGSDDDEQDDEEGGESW--WILKV 127

Query: 500 GSRVSARVGEKLQAKFFGEQLRVDFVYYGVWALKFSTRLEFQDFETEFRNCLFENTY 670
           GS+V A+V  ++Q K FG+Q RVDFV  GVWA+KF +  E+++F  +F++CLFENTY
Sbjct: 128 GSKVRAKVALEMQLKTFGDQCRVDFVSQGVWAMKFFSEDEYRNFVGKFQDCLFENTY 184


>tr|Q6VVW7|Q6VVW7_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=2
           SV=1
          Length = 639

 Score =  105 bits (261), Expect = 3e-21
 Identities = 49/112 (43%), Positives = 67/112 (59%)
 Frame = +2

Query: 335 KLYRHLGGNTPKAQWVVADKAVSWEFTRXXXXXXXXXXXXXXXVSGSWKTWYLLVGSRVS 514
           KLY H+GGNTPKA+W+++ K  ++EF +                 G    W L VG ++ 
Sbjct: 81  KLYLHVGGNTPKAKWIISQKLTNYEFVKTLKIGGDDEDDYGSSSGGDEGFWVLKVGKKIK 140

Query: 515 ARVGEKLQAKFFGEQLRVDFVYYGVWALKFSTRLEFQDFETEFRNCLFENTY 670
            RV   +Q K FG+Q RVDFV  GVWALKF    E+++F T+F++CLFEN Y
Sbjct: 141 VRVSTDMQLKMFGDQRRVDFVDNGVWALKFFVDDEYRNFITKFQDCLFENVY 192


>tr|Q6VVW8|Q6VVW8_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=4
           SV=1
          Length = 639

 Score =  104 bits (260), Expect = 4e-21
 Identities = 48/112 (42%), Positives = 67/112 (59%)
 Frame = +2

Query: 335 KLYRHLGGNTPKAQWVVADKAVSWEFTRXXXXXXXXXXXXXXXVSGSWKTWYLLVGSRVS 514
           KLY H+GGNTPKA+W+++ K  ++EF +                 G    W L VG ++ 
Sbjct: 81  KLYLHVGGNTPKAKWIISQKLTNYEFVKTLKIGGDDEDDYGSSSGGDEGFWVLKVGKKIK 140

Query: 515 ARVGEKLQAKFFGEQLRVDFVYYGVWALKFSTRLEFQDFETEFRNCLFENTY 670
            RV   +Q K FG+Q R+DFV  GVWALKF    E+++F T+F++CLFEN Y
Sbjct: 141 VRVSTDMQLKMFGDQRRIDFVDNGVWALKFFVDDEYRNFITKFQDCLFENVY 192


>tr|A9TTW4|A9TTW4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_198241 PE=4 SV=1
          Length = 546

 Score =  103 bits (258), Expect = 8e-21
 Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
 Frame = +2

Query: 329 KAKLYRHLGGNTPKAQWVVADKAVSWEFTRXXXXXXXXXXXXXXXVSGSWK-------TW 487
           + KLY+H+GG TP A+WV  +K + +EF R                 G WK       +W
Sbjct: 3   RVKLYQHVGGTTPAAKWVPVEKQIGYEFVREDEEDD----------DGEWKLNTKNFRSW 52

Query: 488 YLLVGSRVSARVGEKLQAKFFGEQLRVDFVYYGVWALKFSTRLEFQDFETEFRNCLFENT 667
            LLVG +  A V + LQAKFF +QLRVDF++ GVWA+KF    ++  F  ++ NCLFEN 
Sbjct: 53  LLLVGGKFGAPVDDNLQAKFFDDQLRVDFIWKGVWAMKFMNSTDYHTFVEKYNNCLFENV 112

Query: 668 Y 670
           +
Sbjct: 113 H 113


>tr|O04394|O04394_SOLLC Dem protein OS=Solanum lycopersicum GN=dem
           PE=2 SV=1
          Length = 644

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 55/141 (39%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
 Frame = +2

Query: 260 LQSIGSKFDSLTLA-GKRVAKGP---QKAKLYRHLGGNTPKAQWVVADKAVSWEFTRXXX 427
           L  + +K  +L L  G   AK P      KLY H+GGNT  ++WVV+DK  ++ F +   
Sbjct: 58  LDDVEAKLKALKLKYGTPHAKTPTAKNAVKLYLHVGGNTANSKWVVSDKVTAYSFVKSGS 117

Query: 428 XXXXXXXXXXXXVSGSWKTWYLLVGSRVSARVGEKLQAKFFGEQLRVDFVYYGVWALKFS 607
                          +W  W L +GS+V A++ E LQ K F EQ RVDFV  GVWA++F 
Sbjct: 118 EDGSDDDENEETEENAW--WVLKIGSKVRAKIDENLQLKAFKEQKRVDFVANGVWAVRFF 175

Query: 608 TRLEFQDFETEFRNCLFENTY 670
              E++ F   +++CLFENTY
Sbjct: 176 GEEEYKAFIDLYQSCLFENTY 196


>tr|B7FFC8|B7FFC8_MEDTR Putative uncharacterized protein (Fragment)
           OS=Medicago truncatula PE=2 SV=1
          Length = 237

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
 Frame = +2

Query: 260 LQSIGSKFDSLTLAGKRVAKGPQKAKLYRHLGGNTPKAQWVVADKAVSWEFTRXXXXXXX 439
           +  + +K  +L L      + P   KL+ H+GGN+P A+WV+++K  ++ F +       
Sbjct: 47  VDEVEAKLKALKLKYAVKNQNPNAVKLHLHIGGNSPNAKWVISEKFTTYSFVKTRCVGGN 106

Query: 440 XXXXXXXXVSGSWKT----WYLLVGSRVSARVGEKLQAKFFGEQLRVDFVYYGVWALKFS 607
                     G        W L +GS++ ++VG ++Q K   +Q RVDF+  GVWA+KF 
Sbjct: 107 SDDDEDEEEDGDDDADEGFWVLKIGSKIRSKVGGEMQLKTLADQRRVDFIAKGVWAMKFF 166

Query: 608 TRLEFQDFETEFRNCLFENTY 670
           T  +F  F  +F+NC FENT+
Sbjct: 167 TEQDFDAFLVKFQNCTFENTH 187


>tr|Q9SZB7|Q9SZB7_ARATH Dem-like protein OS=Arabidopsis thaliana
           GN=F17M5.160 PE=2 SV=1
          Length = 645

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
 Frame = +2

Query: 260 LQSIGSKFDSLTLAGKRVAKGPQ---KAKLYRHLGGNTPKAQWVVADKAVSWEFTRXXXX 430
           L  + +K  +L L        P     A+L+R++ GNTPKA+WV A+K  ++ F +    
Sbjct: 63  LDDVEAKLQALKLKYPLTQSAPSTQNSARLFRYINGNTPKAKWVTAEKLTAYCFVKTNKG 122

Query: 431 XXXXXXXXXXX-VSGSWKTWYLLVGSRVSARVGEKLQAKFFGEQLRVDFVYYGVWALKFS 607
                       V   W  W L VGS++  +V +++Q K + +Q RVDFV   VWA+KF+
Sbjct: 123 DEDDEDDDENGDVENEW--WILKVGSKIREKVSDEMQLKAYKDQRRVDFVAKAVWAMKFA 180

Query: 608 TRLEFQDFETEFRNCLFENTY 670
           +  +F  F + + NCLFEN +
Sbjct: 181 SSEDFSVFVSSYNNCLFENNH 201


>tr|Q6ETM2|Q6ETM2_ORYSJ Os02g0178500 protein OS=Oryza sativa subsp.
           japonica GN=P0544B02.5 PE=2 SV=1
          Length = 649

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 46/112 (41%), Positives = 67/112 (59%)
 Frame = +2

Query: 335 KLYRHLGGNTPKAQWVVADKAVSWEFTRXXXXXXXXXXXXXXXVSGSWKTWYLLVGSRVS 514
           KLY H+GG++P A+W+++D+  +  F R                + S   W L+VGS++ 
Sbjct: 96  KLYLHIGGSSPSARWIISDRLAAASFVRAGDDDDDD--------APSSGPWCLVVGSKIR 147

Query: 515 ARVGEKLQAKFFGEQLRVDFVYYGVWALKFSTRLEFQDFETEFRNCLFENTY 670
           ARVG +LQ K F  Q RVDFV  GVWALKF     + +F  ++++CLFEN+Y
Sbjct: 148 ARVGPELQLKTFPAQRRVDFVADGVWALKFLHADGYPNFYAKYQSCLFENSY 199