DK961197 |
Clone id |
TST39A01NGRL0009_H09 |
Library |
TST39 |
Length |
660 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_H09. 5' end sequence. |
Accession |
DK961197 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2575Contig1 |
Sequence |
GACCCCCTCTGAGGTTCCCCCCTCCCGTGCGTCCTCTCGTTGAGACATGCGCTCCACAAC AAGAAGGCGGAAGTCGAGGAAACGAAAACCCTCTTCGCGCAGGAAGTCTTCTTCAAGGAA GAGATCTCGCAGATGTGTCTCTGCAAATGTGCCGTCTCCTGATGAAGACTATGTCCTAGA GAGTGACGGCGATGAAAGCAGCTCTGACTCCGATGAAAGTTCTGCTGATGGGGGCACAGA GGAGGAGGAAGAAGAAGAAGAAGTAGTAGAAGAAGAGATGCAAATTGATACCAGGAATGA GACAGGGAGTTTTGATGCTCGACTAGGTGCAAGCAGGCCACGTCAACGGTGTAGGCGCCG TAAACCTTATTCTTCAGATGAGGAATTCAATGTGGATTTAGAAAGGGACTCGAATGATGA TGGGTCTGCTGGTGACGGTCCTTCATATCCTCGATCTGCTCGGGCCCGGCGTGATCGCAT CAGAAATCCTGTTACTGGTAATGACACCGATGTGGATGCGAAACAGAATGGTTTTCAAGC ATCTGGCCCTGCTAGGGTACGTCATAAGCGTCGTAAGCAAGACTCTTCAGATGAAGATTT TGAGATGACCGCAGAAGAAGGTTTGAGTAATGGTAGCTGGGCTAACGAGGGTGCTGTTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1ZXC2 |
Definition |
sp|Q1ZXC2|PABPA_DICDI Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum |
Align length |
113 |
Score (bit) |
32.7 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8Q7Y7 |
Definition |
tr|A8Q7Y7|A8Q7Y7_MALGO Putative uncharacterized protein OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) |
Align length |
93 |
Score (bit) |
37.7 |
E-value |
0.63 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961197|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_H09, 5' (660 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8Q7Y7|A8Q7Y7_MALGO Putative uncharacterized protein OS=Malas... 38 0.63 tr|B4IBA8|B4IBA8_DROSE GM15276 OS=Drosophila sechellia GN=GM1527... 37 1.1 tr|B3L500|B3L500_PLAKH Putative uncharacterized protein OS=Plasm... 37 1.4 tr|O18409|O18409_DROME Testis-specific RNP-type RNA binding prot... 36 1.8 tr|Q29AZ8|Q29AZ8_DROPS GA20667 OS=Drosophila pseudoobscura pseud... 36 2.4 tr|B4GZB3|B4GZB3_DROPE GL27335 OS=Drosophila persimilis GN=GL273... 36 2.4 tr|B4JZW0|B4JZW0_DROGR GH23925 OS=Drosophila grimshawi GN=GH2392... 35 3.1 tr|Q6CDQ2|Q6CDQ2_YARLI YALI0B22176p OS=Yarrowia lipolytica GN=YA... 35 3.1 tr|Q5BDE0|Q5BDE0_EMENI Putative uncharacterized protein OS=Emeri... 35 3.1 tr|B4NEQ4|B4NEQ4_DROWI GK25682 OS=Drosophila willistoni GN=GK256... 35 4.1 tr|Q0AQ49|Q0AQ49_MARMM Ribonuclease E OS=Maricaulis maris (strai... 34 7.0 tr|B3NND3|B3NND3_DROER GG20717 OS=Drosophila erecta GN=GG20717 P... 34 7.0 tr|B4P8I7|B4P8I7_DROYA GE14222 OS=Drosophila yakuba GN=GE14222 P... 34 9.1 tr|B0CZZ5|B0CZZ5_LACBS Predicted protein OS=Laccaria bicolor (st... 34 9.1
>tr|A8Q7Y7|A8Q7Y7_MALGO Putative uncharacterized protein OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=MGL_3160 PE=4 SV=1 Length = 863
Score = 37.7 bits (86), Expect = 0.63 Identities = 28/93 (30%), Positives = 44/93 (47%) Frame = +2
Query: 374 SDEEFNVDLERDSNDDGSAGDGPSYPXXXXXXXXXXXNPVTGNDTDVDAKQNGFQASGPA 553 S+ E + D + DS+ DG DG +D DVDA+Q+ +SG + Sbjct: 52 SESEGDSDSDSDSDGDGDGSDGLEAENDEQ------------DDNDVDAEQSNADSSGGS 99
Query: 554 RVRHKRRKQDSSDEDFEMTAEEGLSNGSWANEG 652 + R+ + SD D + +E G S+GS A +G Sbjct: 100 ET--EDRENEDSDRDAQQ-SEAGSSDGSEAKDG 129
>tr|B4IBA8|B4IBA8_DROSE GM15276 OS=Drosophila sechellia GN=GM15276 PE=4 SV=1 Length = 1236
Score = 37.0 bits (84), Expect = 1.1 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 2/111 (1%) Frame = -2
Query: 632 HYSNLLLRSSQNLHLKSLA--YDAYDVP*QGQMLENHSVSHPHRCHYQ*QDF*CDHAGPE 459 H+S+ + Q H+ S Y + + Q Q L NH H H H+ H+ + Sbjct: 600 HHSHQQQQQQQQQHMSSPQHQYQQHQILHQQQQLPNHHHHHHHHHHH--------HSQLQ 651
Query: 458 QIEDMKDRHQQTHHHSSPFLNPH*IPHLKNKVYGAYTVDVACLHLVEHQNS 306 Q++ + + QQ H P + H + + + H ++HQ S Sbjct: 652 QLQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHYQ---QHAIQHQQS 699
>tr|B3L500|B3L500_PLAKH Putative uncharacterized protein OS=Plasmodium knowlesi (strain H) GN=PKH_091710 PE=4 SV=1 Length = 721
Score = 36.6 bits (83), Expect = 1.4 Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 5/138 (3%) Frame = -2
Query: 533 NHSVSHPHRCHYQ*QDF*CDHAGPEQIEDMKDRHQQTHHHSSPFLNPH*IPHLKNKVYGA 354 +H +H + H+Q +H +Q ++ HQQ HH + H + K + Sbjct: 239 HHQQNHRQQNHHQQNHHQQNHH--QQNLHQQNHHQQNHHQQNHHQQNHHQQNHHQKNHHQ 296
Query: 353 YTVDVACLHLVEH--QNSLSHSWYQFASXXXXXXXXXXXXLCPHQQNFHRS---QSCFHR 189 + LH +H QN + +Q HQQN H+ Q H+ Sbjct: 297 QNLHQQNLHQQKHHQQNLHQQNLHQQNLHQQNHHQQNHHQQNLHQQNLHQQNHHQQNLHQ 356
Query: 188 RHSLGHSLHQETAHLQRH 135 ++ +LHQ+ H Q H Sbjct: 357 QNHHQQNLHQQNLHQQNH 374
>tr|O18409|O18409_DROME Testis-specific RNP-type RNA binding protein OS=Drosophila melanogaster GN=aret PE=1 SV=1 Length = 808
Score = 36.2 bits (82), Expect = 1.8 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 4/87 (4%) Frame = -2
Query: 545 QMLENHSVSHPHRCHYQ*QDF*CDHAGPEQIEDMKDRHQQTHHHSSPFLNPH*IPHLKNK 366 Q+ +HS+ H H H+Q Q H +Q+ + H HHH P P + Sbjct: 93 QLKSSHSLQHHHSHHHQLQRHTALHQQQQQLHHHQPHHNHHHHHPYQRPRPTSPPQQQTS 152
Query: 365 VYGAYTVDVACLH----LVEHQNSLSH 297 Y +A L L++ Q L H Sbjct: 153 TYQQQLSQLAALQDHHDLLQTQQELFH 179
>tr|Q29AZ8|Q29AZ8_DROPS GA20667 OS=Drosophila pseudoobscura pseudoobscura GN=GA20667 PE=3 SV=2 Length = 423
Score = 35.8 bits (81), Expect = 2.4 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Frame = -2
Query: 536 ENHSVSHPHRCHYQ*QDF*CDHAGPEQIEDMKDRHQQ---THHHSSPFLNPH*IPHLKNK 366 + H HPH+ Q QD A +Q+ HQ+ T SP L P PH ++ Sbjct: 78 QQHLHQHPHQYQQQQQDL--PAASQQQLHHHLVEHQEDATTSSSLSPLLPPP--PHGHHQ 133
Query: 365 VYGAYTVDVACLHLVEHQNSLSHSWYQFAS 276 +YG+Y H+ +H + H +Q A+ Sbjct: 134 LYGSYQDYGMPAHMFQHHHGHPHQSFQPAA 163
>tr|B4GZB3|B4GZB3_DROPE GL27335 OS=Drosophila persimilis GN=GL27335 PE=4 SV=1 Length = 423
Score = 35.8 bits (81), Expect = 2.4 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Frame = -2
Query: 536 ENHSVSHPHRCHYQ*QDF*CDHAGPEQIEDMKDRHQQ---THHHSSPFLNPH*IPHLKNK 366 + H HPH+ Q QD A +Q+ HQ+ T SP L P PH ++ Sbjct: 78 QQHLHQHPHQYQQQQQDL--PAASQQQLHHHLVEHQEDATTSSSLSPLLPPP--PHGHHQ 133
Query: 365 VYGAYTVDVACLHLVEHQNSLSHSWYQFAS 276 +YG+Y H+ +H + H +Q A+ Sbjct: 134 LYGSYQDYGMPAHMFQHHHGHPHQSFQPAA 163
>tr|B4JZW0|B4JZW0_DROGR GH23925 OS=Drosophila grimshawi GN=GH23925 PE=4 SV=1 Length = 1557
Score = 35.4 bits (80), Expect = 3.1 Identities = 36/153 (23%), Positives = 52/153 (33%), Gaps = 5/153 (3%) Frame = -2
Query: 551 QGQMLENHSVSHPHRCHYQ*QDF*CDHAGPEQIEDMK----DRHQQTHHHSSPFLNPH*I 384 Q Q HP H Q Q H P Q + ++ +H Q H P PH Sbjct: 131 QHQHHHQQQQQHPQEQHQQLQQ----HPHPLQQQQLQLHPHQQHPQHQQHQQPLHQPHLQ 186
Query: 383 PHLKNKVYGAYTVDVACLHLVEHQNSLSHSWYQFASXXXXXXXXXXXXLCPHQQNFHRSQ 204 PHL + LV+ Q S + ++ HQQ H Sbjct: 187 PHLLQE------------SLVDQQRQQSIHYANYS----------------HQQYAHEQL 218
Query: 203 SCFHRRHSL-GHSLHQETAHLQRHICEISSLKK 108 H++H L L QE Q+H+ + L++ Sbjct: 219 FAIHQQHQLQQQQLQQEQQQQQQHLQQQQHLQQ 251
>tr|Q6CDQ2|Q6CDQ2_YARLI YALI0B22176p OS=Yarrowia lipolytica GN=YALI0B22176g PE=4 SV=1 Length = 590
Score = 35.4 bits (80), Expect = 3.1 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = -2
Query: 542 MLENHSVSHPHRCHYQ*QDF*CDHAGPEQIEDMKDRHQQTHHHSSPFLNPH*IPHLKNKV 363 M+ +H HPH + Q D+ P+Q + QQ HH+SS P + + + Sbjct: 138 MMSHHGAPHPHAAYPQMYDYQYPPGQPQQQPPPQQAQQQLHHYSSEESLPSSVNSSQTSL 197
Query: 362 YGAYTVDV 339 AY+ V Sbjct: 198 QTAYSPQV 205
>tr|Q5BDE0|Q5BDE0_EMENI Putative uncharacterized protein OS=Emericella nidulans GN=AN1440.2 PE=4 SV=1 Length = 1872
Score = 35.4 bits (80), Expect = 3.1 Identities = 23/80 (28%), Positives = 35/80 (43%) Frame = +2
Query: 365 PYSSDEEFNVDLERDSNDDGSAGDGPSYPXXXXXXXXXXXNPVTGNDTDVDAKQNGFQAS 544 P S + E N ++ D +DD +GP+ N T T D ++NG + S Sbjct: 257 PESENGEGNTKVDEDDDDDDDDDEGPT----TRRRNRPNRNQNTQEATQQDEEENGLRRS 312
Query: 545 GPARVRHKRRKQDSSDEDFE 604 R + +RK D + DFE Sbjct: 313 SRKRPKSSQRK-DDEESDFE 331
>tr|B4NEQ4|B4NEQ4_DROWI GK25682 OS=Drosophila willistoni GN=GK25682 PE=4 SV=1 Length = 983
Score = 35.0 bits (79), Expect = 4.1 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = -2
Query: 545 QMLENHSVSHPHRCHYQ*QDF*CDHAGPEQIEDMKDRHQQTHHHSSPFLNPH*IP-HLKN 369 Q+ ++H HPH H Q Q +Q + + +HQQ+HHH P P HL + Sbjct: 246 QLQQHHQQHHPHHFHLQQQH--QQQQQQQQQQQQQQQHQQSHHHPKHLPPPPPHPAHLHH 303
Query: 368 KVYGAYTVDVACL 330 VDV + Sbjct: 304 HHQQQQQVDVVAV 316
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