DK961199 |
Clone id |
TST39A01NGRL0009_H11 |
Library |
TST39 |
Length |
442 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_H11. 5' end sequence. |
Accession |
DK961199 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL334Contig1 |
Sequence |
CTTCGCCAAGAAGGAGAGGCGCTGGAAGAGCTTGGTAAAGGGGAGGAGTGAGCAATCTGA GAAGGTGAGATCTAGGAGCGAGCGGCAGCGGCGGCGACTGCCGCTGTTTTTATGGCTCCG AGCTTTACCAAGCTCTTCCAGCGCCTCTTCGCCAAGAAGGAGATGCGCGTCCTCATGGTT GGTCTCGACGCGGCCGGTAAAACCACCATTCTCTACAAGTTGAAGCTTGGCGAGATTGTC ACCACCGTCCCTACAATCAGTTTCAGTGGTGAAACGGTGGAGTACAAAAACATCAGTTTT ACTGTATGGGATGTGGGAGGTCAGGACAAGATCCGTCCGCTATGGAGGCACTACTTCCAG AACACGCGAGGTCTGATCTTTGTTGTTGACAGTAACGACTGAGACCGTGTGGTGGAAGCC CGGGATGAGCTGCATAGAATGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O48920 |
Definition |
sp|O48920|ARF_VIGUN ADP-ribosylation factor OS=Vigna unguiculata |
Align length |
110 |
Score (bit) |
203.0 |
E-value |
2.0e-52 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPC8 |
Definition |
tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
110 |
Score (bit) |
204.0 |
E-value |
2.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961199|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_H11, 5' (442 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea... 204 2e-51 tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hya... 204 2e-51 tr|Q6JV86|Q6JV86_POPTO ADP-ribosylation factor 1 (Fragment) OS=P... 203 3e-51 tr|Q38JU3|Q38JU3_DAUCA ADP ribosylation factor 002 OS=Daucus car... 203 3e-51 tr|Q38HU6|Q38HU6_SOLTU ADP-ribosylation factor 1-like protein OS... 203 3e-51 tr|B7FIW2|B7FIW2_MEDTR Putative uncharacterized protein OS=Medic... 203 3e-51 tr|B7FI12|B7FI12_MEDTR Putative uncharacterized protein OS=Medic... 203 3e-51 tr|A9P9X4|A9P9X4_POPTR Putative uncharacterized protein OS=Popul... 203 3e-51 tr|A9P9U3|A9P9U3_POPTR Putative uncharacterized protein OS=Popul... 203 3e-51 tr|A7Q0T1|A7Q0T1_VITVI Chromosome chr7 scaffold_42, whole genome... 203 3e-51 tr|A7PRL9|A7PRL9_VITVI Chromosome chr14 scaffold_27, whole genom... 203 3e-51 tr|B3TLM7|B3TLM7_ELAGV ADP ribosylation factor 002 OS=Elaeis gui... 203 4e-51 tr|Q9ZPJ2|Q9ZPJ2_SOYBN ADP-ribosylation factor (Fragment) OS=Gly... 202 5e-51 tr|Q9LYJ3|Q9LYJ3_ARATH ADP-ribosylation factor-like protein OS=A... 202 7e-51 tr|Q7XZG0|Q7XZG0_ORYSJ Os03g0811900 protein OS=Oryza sativa subs... 202 7e-51 tr|Q6S4R7|Q6S4R7_MEDSA ADP-ribosylation factor OS=Medicago sativ... 202 7e-51 tr|Q5QQ33|Q5QQ33_MEDTR ADP-ribosylation factor 1 OS=Medicago tru... 202 7e-51 tr|Q3HVM8|Q3HVM8_SOLTU Putative uncharacterized protein OS=Solan... 202 7e-51 tr|Q20BN2|Q20BN2_PANGI ADP-ribosylation factor-like protein OS=P... 202 7e-51 tr|Q10CA9|Q10CA9_ORYSJ ADP-ribosylation factor, putative, expres... 202 7e-51 tr|B7FL30|B7FL30_MEDTR Putative uncharacterized protein OS=Medic... 202 7e-51 tr|B7FKH3|B7FKH3_MEDTR Putative uncharacterized protein OS=Medic... 202 7e-51 tr|B4FFK3|B4FFK3_MAIZE Putative uncharacterized protein OS=Zea m... 202 7e-51 tr|A7QNZ2|A7QNZ2_VITVI Chromosome chr1 scaffold_135, whole genom... 202 7e-51 tr|A7PM80|A7PM80_VITVI Chromosome chr14 scaffold_21, whole genom... 202 7e-51 tr|A5CB74|A5CB74_VITVI Putative uncharacterized protein OS=Vitis... 202 7e-51 tr|A3ANY8|A3ANY8_ORYSJ Putative uncharacterized protein OS=Oryza... 202 7e-51 tr|A2XN99|A2XN99_ORYSI Putative uncharacterized protein OS=Oryza... 202 7e-51 tr|Q9LQC8|Q9LQC8_ARATH F28C11.12 OS=Arabidopsis thaliana PE=3 SV=1 201 1e-50 tr|Q8W4Z3|Q8W4Z3_GOSHI ADP-ribosylation factor (ADP-ribosylation... 201 1e-50
>tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 181
Score = 204 bits (519), Expect = 2e-51 Identities = 100/110 (90%), Positives = 105/110 (95%) Frame = +1
Query: 112 MAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEYKN 291 M +FTKLFQRLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEYKN Sbjct: 1 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 ISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 110
>tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hyacinthus orientalis GN=ARF PE=2 SV=1 Length = 199
Score = 204 bits (518), Expect = 2e-51 Identities = 101/112 (90%), Positives = 105/112 (93%) Frame = +1
Query: 106 VFMAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEY 285 V M SFTKLF RLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEY Sbjct: 17 VEMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 76
Query: 286 KNISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 KNISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 77 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 128
>tr|Q6JV86|Q6JV86_POPTO ADP-ribosylation factor 1 (Fragment) OS=Populus tomentosa PE=2 SV=1 Length = 195
Score = 203 bits (517), Expect = 3e-51 Identities = 100/110 (90%), Positives = 104/110 (94%) Frame = +1
Query: 112 MAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEYKN 291 M SFTKLF RLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEYKN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 ISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 110
>tr|Q38JU3|Q38JU3_DAUCA ADP ribosylation factor 002 OS=Daucus carota GN=adprf-002 PE=2 SV=1 Length = 181
Score = 203 bits (517), Expect = 3e-51 Identities = 100/110 (90%), Positives = 104/110 (94%) Frame = +1
Query: 112 MAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEYKN 291 M SFTKLF RLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEYKN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 ISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 110
>tr|Q38HU6|Q38HU6_SOLTU ADP-ribosylation factor 1-like protein OS=Solanum tuberosum PE=2 SV=1 Length = 181
Score = 203 bits (517), Expect = 3e-51 Identities = 100/110 (90%), Positives = 104/110 (94%) Frame = +1
Query: 112 MAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEYKN 291 M SFTKLF RLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEYKN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 ISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 110
>tr|B7FIW2|B7FIW2_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 181
Score = 203 bits (517), Expect = 3e-51 Identities = 100/110 (90%), Positives = 104/110 (94%) Frame = +1
Query: 112 MAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEYKN 291 M SFTKLF RLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEYKN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 ISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 110
>tr|B7FI12|B7FI12_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 181
Score = 203 bits (517), Expect = 3e-51 Identities = 100/110 (90%), Positives = 104/110 (94%) Frame = +1
Query: 112 MAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEYKN 291 M SFTKLF RLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEYKN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 ISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 110
>tr|A9P9X4|A9P9X4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 181
Score = 203 bits (517), Expect = 3e-51 Identities = 100/110 (90%), Positives = 104/110 (94%) Frame = +1
Query: 112 MAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEYKN 291 M SFTKLF RLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEYKN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 ISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 110
>tr|A9P9U3|A9P9U3_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 181
Score = 203 bits (517), Expect = 3e-51 Identities = 100/110 (90%), Positives = 104/110 (94%) Frame = +1
Query: 112 MAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEYKN 291 M SFTKLF RLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEYKN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 ISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 110
>tr|A7Q0T1|A7Q0T1_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028169001 PE=3 SV=1 Length = 185
Score = 203 bits (517), Expect = 3e-51 Identities = 100/110 (90%), Positives = 104/110 (94%) Frame = +1
Query: 112 MAPSFTKLFQRLFAKKEMRVLMVGLDAAGKTTILYKLKLGEIVTTVPTISFSGETVEYKN 291 M SFTKLF RLFAKKEMR+LMVGLDAAGKTTILYKLKLGEIVTT+PTI F+ ETVEYKN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTRGLIFVVDSND*DRVVEARDELHRM 441 ISFTVWDVGGQDKIRPLWRHYFQNT+GLIFVVDSND DRVVEARDELHRM Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRM 110
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