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NBDC - LSDB Archive
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DK961210
Clone id TST39A01NGRL0009_H23
Library
Length 564
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_H23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGAGTTTGAACGGGCCACTCGCGAGCAGTCTACCACTTTGAAGGAATCAGATAGAAGGA
TAGGGGGCCCGAGAGGGAGAATCTCGTGTTTGTTTGCATGAATGGGTGCCATGCCTAGCG
ACATTGGGCGTTTCCTGCCCTTCTTCGTCTCTATGCTTGTCGTCTTTCGTGGGGAGCGCC
TCGCGTCTTTCTCGGGTGGCCGCTGCTATTGCCCCTTCCCCTGTCCGTGCCTTCAAGGTC
GAGGCACATAAAGGCGAATGGCTTCCTGGTCTGGCGTCCCCTGCTTACCTAAACGGAAAC
CTTGCTGGTGACAATGGCTTCTACCCCCTTGGCTTGCCTGAAGATCCTGCCGACCTTAAC
TGGTATGTGCAACCAGAGCTTCAAAATGGAAGATGGGCAATGCTTGAAGTAACTGGCATG
TTGATCCCCGACCTCTTGACAAAGATTGGTATCATCAATGTTCCTGCATGTTATGATGCG
GGCAAGGTCGAGTACTTCTCCCCCGCCTCCACTCTCTTTGTGATCGAATTCGTCTTGTTC
CACTATGTGTAGGTGAGAAGATGG
■■Homology search results ■■ -
sp_hit_id P27521
Definition sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana
Align length 112
Score (bit) 179.0
E-value 1.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961210|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_H23, 5'
         (564 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   179   1e-44
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   174   4e-43
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   122   9e-28
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   120   6e-27
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   115   1e-25
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    74   4e-13
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    74   5e-13
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    70   6e-12
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    66   1e-10
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...    65   2e-10
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...    65   3e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    60   6e-09
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    57   6e-08
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    57   8e-08
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    55   2e-07
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    53   9e-07
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    52   2e-06
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    50   8e-06
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    50   1e-05
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    49   2e-05
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    49   2e-05
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    48   4e-05
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...    48   4e-05
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    47   5e-05
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    47   5e-05
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    47   5e-05
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    47   7e-05
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...    47   7e-05
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    47   7e-05
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...    47   9e-05

>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  179 bits (453), Expect = 1e-44
 Identities = 83/112 (74%), Positives = 95/112 (84%)
 Frame = +1

Query: 229 AFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRWAMLE 408
           +FKVEA KGEWLPGLASP YL G+LAGDNGF PLGL EDP +L W+VQ EL NGRWAML 
Sbjct: 47  SFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106

Query: 409 VTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV*VRRW 564
           V GML+P++ TKIGIINVP  YDAGK +YF+ +STLFVIEF+LFHYV +RRW
Sbjct: 107 VAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRW 158


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  174 bits (440), Expect = 4e-43
 Identities = 82/116 (70%), Positives = 93/116 (80%)
 Frame = +1

Query: 217 SPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRW 396
           SP  +FKVEA KGEWLPGLASP YL G+L GDNGF PLGL EDP +L W+VQ EL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRW 101

Query: 397 AMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV*VRRW 564
           AML V GML+P++ T IGIINVP  Y AGK EYF+ +STLFVIEF+L HYV +RRW
Sbjct: 102 AMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRW 157


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  122 bits (307), Expect = 9e-28
 Identities = 64/123 (52%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
 Frame = +1

Query: 199 AAAIAPSPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPE 378
           AA+ +P   R       KG WLPGL SPAYL+G+L GDNGF PL L EDP DL W+VQ +
Sbjct: 16  AASGSPRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQAD 75

Query: 379 LQNGRWAMLEVTGMLIPDLLTKIGIINVPACYD-AGKVEYFSPASTLFVIEFVLFHYV*V 555
           + NGRWAML V GMLIP++LTK G++N P      GK  YF+ +ST   +  +   YV +
Sbjct: 76  VVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEI 134

Query: 556 RRW 564
           RRW
Sbjct: 135 RRW 137


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  120 bits (300), Expect = 6e-27
 Identities = 62/129 (48%), Positives = 78/129 (60%), Gaps = 5/129 (3%)
 Frame = +1

Query: 193 RVAAAIAPSPVRAFKVEAHKGE-----WLPGLASPAYLNGNLAGDNGFYPLGLPEDPADL 357
           RV+  IAP   R+  V A   +     W PG   P +L+G+L GD GF PLGL  DP  L
Sbjct: 41  RVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL 100

Query: 358 NWYVQPELQNGRWAMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVL 537
            W  Q EL + RWAML   G+ IP+ LTKIG++N P+ Y AG+ EYF+  +TLFVIE VL
Sbjct: 101 KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVL 160

Query: 538 FHYV*VRRW 564
             +   RRW
Sbjct: 161 IGWAEGRRW 169



 Score = 31.2 bits (69), Expect = 3.7
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
 Frame = +1

Query: 280 PAYLNGNLAGDNGFYPLGLPEDP--------ADLNWYVQPELQNGRWAMLEVTGMLIPDL 435
           P + N  L G +  YP GL  DP        A +      E++NGR AML V G     +
Sbjct: 182 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHI 241

Query: 436 LTKIGIIN 459
            T  G I+
Sbjct: 242 YTGTGPID 249


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  115 bits (289), Expect = 1e-25
 Identities = 54/102 (52%), Positives = 68/102 (66%)
 Frame = +1

Query: 259 WLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRWAMLEVTGMLIPDLL 438
           W PG   P +L+G+L GD GF PLGL  DP  L W  Q EL + RWAML   G+ IP+LL
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 439 TKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV*VRRW 564
           TKIGI+N P+ Y AG+ EYF+  +TLF++E VL  +   RRW
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRW 169



 Score = 31.2 bits (69), Expect = 3.7
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
 Frame = +1

Query: 280 PAYLNGNLAGDNGFYPLGLPEDP--------ADLNWYVQPELQNGRWAMLEVTGMLIPDL 435
           P + N  L G +  YP GL  DP        A +      E++NGR AML V G     +
Sbjct: 182 PIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHI 241

Query: 436 LTKIGIIN 459
            T  G I+
Sbjct: 242 YTGTGPID 249


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 53/133 (39%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
 Frame = +1

Query: 184 RLSRVAAAIAPSPVRAFKVEAHKGEWLPGLAS------PAYLNGNLAGDNGFYPLGLPED 345
           +L  VAAA AP           K  W+P +        P +L+G+L GD GF PLGL +D
Sbjct: 46  KLVVVAAAAAP-----------KKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKD 94

Query: 346 PADLNWYVQPELQNGRWAMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVI 525
           PA L WY + EL +GRWAML V G+ +    T  GI    A  D G V  FS   TL   
Sbjct: 95  PAFLKWYREAELIHGRWAMLAVLGIFVGQAWT--GIPWFEAGADPGAVAPFS-FGTLLGT 151

Query: 526 EFVLFHYV*VRRW 564
           + +L  +V  +RW
Sbjct: 152 QLLLMGWVESKRW 164


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 73.9 bits (180), Expect = 5e-13
 Identities = 49/131 (37%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
 Frame = +1

Query: 190 SRVAAAIAPSPVRAFKVEAHKGEWLPG------LASPAYLNGNLAGDNGFYPLGLPEDPA 351
           +RV  A  P         A K  W+P       L  P +L+G+L GD GF PLGL +DPA
Sbjct: 33  ARVGGAATPKRFTVLAAAAKKS-WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 352 DLNWYVQPELQNGRWAMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEF 531
            L WY + EL +GRWAM  V G+ +    +  GI    A  D G +  FS   TL   + 
Sbjct: 92  FLKWYREAELIHGRWAMAAVLGIFVGQAWS--GIPWFEAGADPGAIAPFS-FGTLLGTQL 148

Query: 532 VLFHYV*VRRW 564
           +L  +V  +RW
Sbjct: 149 ILMGWVESKRW 159


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 70.5 bits (171), Expect = 6e-12
 Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
 Frame = +1

Query: 199 AAAIAPSPVRAFKVEAHKGEWLPGLAS------PAYLNGNLAGDNGFYPLGLPEDPADLN 360
           AAA+AP           K  W+P + S      P +L+G+L GD GF PLGL +DPA L 
Sbjct: 46  AAAVAP-----------KKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLK 94

Query: 361 WYVQPELQNGRWAMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLF 540
           WY + EL +GRWAM  V G+ +    +  GI    A  D G +  FS  S L   + +L 
Sbjct: 95  WYREAELIHGRWAMAAVLGIFVGQAWS--GIPWFEAGADPGAIAPFSFGS-LLGTQLLLM 151

Query: 541 HYV*VRRW 564
            +V  +RW
Sbjct: 152 GWVESKRW 159


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
 Frame = +1

Query: 256 EWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRWAMLEVTGMLIPDL 435
           +W+PG   P+YL+G+  GD GF  LGL E PA+L  Y + EL + RWAML V G+++P+ 
Sbjct: 48  DWMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEA 107

Query: 436 LTKIGIINVP--ACYDAGKVEY------FSPASTLFVIEFVLFHYV 549
           L     +     A    G+  Y      +    T+  IEF+   +V
Sbjct: 108 LGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFV 153



 Score = 31.2 bits (69), Expect = 3.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 319 FYPLGLPEDPADLNWYVQPELQNGRWAMLEVTGMLI 426
           F PLG  +DPA        E++NGR A+L + G  +
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCV 208


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
 Frame = +1

Query: 184 RLSRVAAAIAPSPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNW 363
           + S V  A +  PV   K  A++  W     S +YL+G L GD GF PLGL  DP     
Sbjct: 34  KASFVVRAASTPPV---KQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGG 89

Query: 364 YVQP------ELQNGRWAMLEVTGMLIPDLLTKIGII---------NVPACYDAGKVEYF 498
           +++P      E+ NGR+AML   G + P++L K G+I                AG   Y+
Sbjct: 90  FIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYW 149

Query: 499 SPASTLFVIEFVLFHYV*VRRW 564
           +   TLFV+E  L  +   RR+
Sbjct: 150 ADNYTLFVLEMALMGFAEHRRF 171



 Score = 39.3 bits (90), Expect = 0.014
 Identities = 24/63 (38%), Positives = 31/63 (49%)
 Frame = +1

Query: 262 LPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRWAMLEVTGMLIPDLLT 441
           L G   PAY  G L     F PLG  +D   +      E++NGR AML + G  I  L+T
Sbjct: 192 LGGSGDPAYPGGPL-----FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVT 246

Query: 442 KIG 450
            +G
Sbjct: 247 GVG 249
tr_hit_id Q41039
Definition tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I (Fragment) OS=Pinus sylvestris
Align length 124
Score (bit) 187.0
E-value 3.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961210|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_H23, 5'
         (564 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-har...   187   3e-46
tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-har...   187   3e-46
tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea...   182   8e-45
tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein ...   181   3e-44
tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding prote...   180   4e-44
tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medic...   180   6e-44
tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromos...   179   7e-44
tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Popul...   179   1e-43
tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta ...   177   3e-43
tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12) ...   177   5e-43
tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanu...   175   2e-42
tr|B6SZR1|B6SZR1_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   175   2e-42
tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11) ...   174   2e-42
tr|B8LS59|B8LS59_BAMOL Photosystem I light-harvesting complex ty...   172   1e-41
tr|B4FV94|B4FV94_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   172   1e-41
tr|Q6YWJ7|Q6YWJ7_ORYSJ Os08g0435900 protein OS=Oryza sativa subs...   170   6e-41
tr|Q6SYB3|Q6SYB3_ORYSJ Chlorophyll a/b binding protein presusor ...   170   6e-41
tr|B6TNZ8|B6TNZ8_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   170   6e-41
tr|A2YVJ1|A2YVJ1_ORYSI Putative uncharacterized protein OS=Oryza...   170   6e-41
tr|B6TFT2|B6TFT2_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   168   2e-40
tr|Q9ZSU1|Q9ZSU1_ORYSA Chlorophyll a/b-binding protein presursor...   167   4e-40
tr|A2YVI8|A2YVI8_ORYSI Putative uncharacterized protein OS=Oryza...   166   6e-40
tr|Q9LKC7|Q9LKC7_HORVU Chlorophyll a/b-binding protein (Fragment...   166   1e-39
tr|Q40481|Q40481_TOBAC Light-harvesting chlorophyll a /b binding...   160   5e-38
tr|B6DYZ9|B6DYZ9_LIQST Chloroplast chlorophyll a-b binding prote...   142   2e-32
tr|B6DZ35|B6DZ35_9MAGN Chloroplast chlorophyll a-b binding prote...   140   4e-32
tr|B6DZ17|B6DZ17_9MAGN Chloroplast chlorophyll a-b binding prote...   140   4e-32
tr|B6DZ26|B6DZ26_9MAGN Chloroplast chlorophyll a-b binding prote...   140   5e-32
tr|B6DZ24|B6DZ24_9MAGN Chloroplast chlorophyll a-b binding prote...   140   5e-32
tr|B6DZ20|B6DZ20_9MAGN Chloroplast chlorophyll a-b binding prote...   140   5e-32

>tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I (Fragment)
           OS=Pinus sylvestris GN=Lhca4*1-2 PE=2 SV=1
          Length = 244

 Score =  187 bits (475), Expect = 3e-46
 Identities = 90/124 (72%), Positives = 102/124 (82%)
 Frame = +1

Query: 193 RVAAAIAPSPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQ 372
           RV     P+P R+FKVEA KGEWLPGL+SP+YLNG+L GDNGF PLGL EDP  L WYVQ
Sbjct: 27  RVRPGSNPAPARSFKVEA-KGEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 85

Query: 373 PELQNGRWAMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV* 552
            EL NGRWAML V GMLIP++LT IG+INVP  YDAGKVEYF+ +STLFVIEF+LFHYV 
Sbjct: 86  AELVNGRWAMLGVAGMLIPEVLTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 145

Query: 553 VRRW 564
           +RRW
Sbjct: 146 LRRW 149


>tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I OS=Pinus
           sylvestris GN=Lhca4*1-1 PE=2 SV=1
          Length = 251

 Score =  187 bits (475), Expect = 3e-46
 Identities = 90/124 (72%), Positives = 102/124 (82%)
 Frame = +1

Query: 193 RVAAAIAPSPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQ 372
           RV     P+P R+FKVEA KGEWLPGL+SP+YLNG+L GDNGF PLGL EDP  L WYVQ
Sbjct: 34  RVRPGSNPAPARSFKVEA-KGEWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 92

Query: 373 PELQNGRWAMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV* 552
            EL NGRWAML V GMLIP++LT IG+INVP  YDAGKVEYF+ +STLFVIEF+LFHYV 
Sbjct: 93  AELVNGRWAMLGVAGMLIPEVLTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 152

Query: 553 VRRW 564
           +RRW
Sbjct: 153 LRRW 156


>tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score =  182 bits (463), Expect = 8e-45
 Identities = 88/124 (70%), Positives = 99/124 (79%)
 Frame = +1

Query: 193 RVAAAIAPSPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQ 372
           RV     P+P R+FKVEA KGEWLPGL+SP YLNG+L GDNGF PLGL EDP  L WYVQ
Sbjct: 34  RVRPGSNPAPARSFKVEA-KGEWLPGLSSPTYLNGSLPGDNGFDPLGLAEDPESLKWYVQ 92

Query: 373 PELQNGRWAMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV* 552
            EL NGRWAML V GMLIP++LT  G I+VP  YDAGKVEYF+ +STLFVIEF+LFHYV 
Sbjct: 93  AELVNGRWAMLGVAGMLIPEVLTSFGFIDVPKWYDAGKVEYFASSSTLFVIEFILFHYVE 152

Query: 553 VRRW 564
           +RRW
Sbjct: 153 LRRW 156


>tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein
           type 4 OS=Pinus pinaster PE=2 SV=1
          Length = 251

 Score =  181 bits (458), Expect = 3e-44
 Identities = 87/124 (70%), Positives = 99/124 (79%)
 Frame = +1

Query: 193 RVAAAIAPSPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQ 372
           RV     P+P R+FKVEA KGEWLPGL+SP+YLNG+L GDNG  PLGL EDP  L WYVQ
Sbjct: 34  RVRPGSNPAPARSFKVEA-KGEWLPGLSSPSYLNGSLPGDNGXDPLGLAEDPESLKWYVQ 92

Query: 373 PELQNGRWAMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV* 552
            EL NGRWAML V GM IP++LT IG+INVP  YDAGKVEYF+ + TLFVIEF+LFHYV 
Sbjct: 93  AELVNGRWAMLGVAGMXIPEVLTSIGLINVPKWYDAGKVEYFASSXTLFVIEFILFHYVE 152

Query: 553 VRRW 564
           +RRW
Sbjct: 153 LRRW 156


>tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding protein
           OS=Capsicum annuum PE=2 SV=1
          Length = 250

 Score =  180 bits (457), Expect = 4e-44
 Identities = 84/127 (66%), Positives = 101/127 (79%)
 Frame = +1

Query: 184 RLSRVAAAIAPSPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNW 363
           +L+R  +    +   +FKVEA KGEWLPGLASPAYL+G+L GDNGF PLGL EDP +L W
Sbjct: 29  KLNREVSFRPSTSNNSFKVEAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKW 88

Query: 364 YVQPELQNGRWAMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFH 543
           Y+Q EL NGRWAML V GML+P++ T IGI+NVP  YDAGK EYF+ +STLFVIEF+LFH
Sbjct: 89  YIQAELVNGRWAMLGVAGMLLPEVFTSIGILNVPKWYDAGKAEYFASSSTLFVIEFILFH 148

Query: 544 YV*VRRW 564
           YV +RRW
Sbjct: 149 YVEIRRW 155


>tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 253

 Score =  180 bits (456), Expect = 6e-44
 Identities = 84/116 (72%), Positives = 95/116 (81%)
 Frame = +1

Query: 217 SPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRW 396
           SP  +FKVEA KGEWLPGLASP YL G+L GDNGF PLGL EDP +L W+VQ EL NGRW
Sbjct: 42  SPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRW 101

Query: 397 AMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV*VRRW 564
           AML V GML+P++ T IGIINVP  YDAGK EYF+ +STLFVIEF+LFHYV +RRW
Sbjct: 102 AMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRW 157


>tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromosome
           chr17 scaffold_12, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016319001 PE=4 SV=1
          Length = 252

 Score =  179 bits (455), Expect = 7e-44
 Identities = 83/116 (71%), Positives = 96/116 (82%)
 Frame = +1

Query: 217 SPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRW 396
           S  R+FKVEA KGEWLPGL+SP+YL+G+L GDNGF PLGL EDP +L WYVQ EL N RW
Sbjct: 42  SSYRSFKVEAKKGEWLPGLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRW 101

Query: 397 AMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV*VRRW 564
           AML V GML+P++ TKIGIIN P  YDAGK EYF+ +STLFVIEF+LFHYV +RRW
Sbjct: 102 AMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRW 157


>tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 251

 Score =  179 bits (453), Expect = 1e-43
 Identities = 82/112 (73%), Positives = 94/112 (83%)
 Frame = +1

Query: 229 AFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRWAMLE 408
           +FKVEA KGEWLPGL SP+YLNG+L GDNGF PLGL EDP +L W+VQ EL NGRWAML 
Sbjct: 45  SFKVEAKKGEWLPGLPSPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG 104

Query: 409 VTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV*VRRW 564
           V GML+P++ TKIGIIN P  YDAGK EYF+ +STLFVIEF+LFHYV +RRW
Sbjct: 105 VAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRW 156


>tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta
           vulgaris GN=cab11 PE=2 SV=1
          Length = 252

 Score =  177 bits (450), Expect = 3e-43
 Identities = 83/116 (71%), Positives = 95/116 (81%)
 Frame = +1

Query: 217 SPVRAFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRW 396
           S   + KVEA KGEWLPGLASPAYLNG+L GDNGF PL L EDP +L W+VQ EL NGRW
Sbjct: 42  SSTNSLKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRW 101

Query: 397 AMLEVTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV*VRRW 564
           AML V GML+P++ T+IGIINVP  YDAGK EYF+ +STLFVIEF+LFHYV +RRW
Sbjct: 102 AMLGVAGMLLPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRW 157


>tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12)
           OS=Solanum lycopersicum PE=4 SV=1
          Length = 250

 Score =  177 bits (448), Expect = 5e-43
 Identities = 80/112 (71%), Positives = 94/112 (83%)
 Frame = +1

Query: 229 AFKVEAHKGEWLPGLASPAYLNGNLAGDNGFYPLGLPEDPADLNWYVQPELQNGRWAMLE 408
           +FKVEA KGEWLPGL SP YLNG+LAGDNGF PLGL EDP +L W+VQ EL NGRWAML 
Sbjct: 45  SFKVEAKKGEWLPGLTSPTYLNGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLG 104

Query: 409 VTGMLIPDLLTKIGIINVPACYDAGKVEYFSPASTLFVIEFVLFHYV*VRRW 564
           V GML+P++ T IG++NVP  YDAGK +YF+ +STLFVIEF+LFHYV +RRW
Sbjct: 105 VAGMLLPEVFTSIGLLNVPKWYDAGKSDYFASSSTLFVIEFILFHYVEIRRW 156