DK961235 |
Clone id |
TST39A01NGRL0009_I24 |
Library |
TST39 |
Length |
652 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_I24. 5' end sequence. |
Accession |
DK961235 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL13Contig1 |
Sequence |
CACTCCCAGAAGTTGGAGTGCTGCGCGGCCAAGCTCAGATCCAGGTATTGGGTGTACCTC TGTAAAGGATTTTTACATTGGGAGTAGTTTTACAAGTCAGCCAAAATGGTGAAGTTTACA ACTGAAGAGCTGCGTAGGATCATGGACAAGAAGAACAACATTAGGAATATGTCTGTTATC GCCCATGTGGATCATGGGAAATCTACCTTAACAGACTCTCTTGTGGCTGCTGCTGGTATC ATTGCTCAAGAGGTCGCTGGAGATGTGCGCCTGACAGACACCCGTCAAGATGAGGCTGAA CGTGGCATTACCATCAAATCTACTGGGATCTCCCTGTACTATGAAATGTCTGAAAAATCT TTGAAAGATTACAAGGGTGAGAAGGATGGGAATGACTACTTGATTAATCTAATTGATTCT CCGGGCCATGTCGACTTTTCTTCGGAGGTTACTGCAGCTTTGCGCATCACAGATGGTGCC TTGGTGGTGGTAGATTGTGTGGAGGGTGTCTGTGTGCAGACTGAAACTGTCCTTCGACAG GCTCTGGGTGAGAGGATCAGGCCTGTTCTTACAGTCAACAAAATGGACAGGTGCTTTCTT GAGCTACAGGTTGAAGGTGAAGAGGCGTATCAGACTTTCCAGAGGGTGATAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23755 |
Definition |
sp|O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris |
Align length |
182 |
Score (bit) |
296.0 |
E-value |
5.0e-80 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SYQ5 |
Definition |
tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
182 |
Score (bit) |
312.0 |
E-value |
1.0e-83 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961235|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_I24, 5' (652 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 312 1e-83 tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella paten... 312 1e-83 tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subs... 311 3e-83 tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subs... 311 3e-83 tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H06... 311 3e-83 tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza... 311 3e-83 tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 310 5e-83 tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 306 5e-82 tr|A9U245|A9U245_PHYPA Predicted protein OS=Physcomitrella paten... 306 5e-82 tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert seque... 305 2e-81 tr|A2WUX6|A2WUX6_ORYSI Putative uncharacterized protein OS=Oryza... 304 3e-81 tr|Q9ASR1|Q9ASR1_ARATH At1g56070/T6H22_13 (Putative elongation f... 300 7e-80 tr|Q9SGT4|Q9SGT4_ARATH Elongation factor EF-2 OS=Arabidopsis tha... 298 3e-79 tr|A9SYQ7|A9SYQ7_PHYPA Predicted protein OS=Physcomitrella paten... 297 4e-79 tr|A2ZXD6|A2ZXD6_ORYSJ Putative uncharacterized protein OS=Oryza... 288 3e-76 tr|Q8W0C4|Q8W0C4_ORYSJ cDNA clone:J033048F11, full insert sequen... 284 3e-75 tr|A2WUL5|A2WUL5_ORYSI Putative uncharacterized protein OS=Oryza... 284 3e-75 tr|A8JHX9|A8JHX9_CHLRE Elongation factor 2 OS=Chlamydomonas rein... 279 1e-73 tr|A7PWR7|A7PWR7_VITVI Chromosome chr19 scaffold_35, whole genom... 263 5e-69 tr|A4SB22|A4SB22_OSTLU Predicted protein OS=Ostreococcus lucimar... 259 1e-67 tr|Q52MA1|Q52MA1_XENLA Putative uncharacterized protein OS=Xenop... 245 1e-63 tr|Q8BMA8|Q8BMA8_MOUSE Putative uncharacterized protein OS=Mus m... 245 1e-63 tr|Q60423|Q60423_CRIGR Elongation factor 2 OS=Cricetulus griseus... 245 1e-63 tr|Q3UDC8|Q3UDC8_MOUSE Putative uncharacterized protein OS=Mus m... 245 1e-63 tr|Q3UBL9|Q3UBL9_MOUSE Putative uncharacterized protein OS=Mus m... 245 1e-63 tr|Q3TX47|Q3TX47_MOUSE Putative uncharacterized protein OS=Mus m... 245 1e-63 tr|Q3TW58|Q3TW58_MOUSE Putative uncharacterized protein OS=Mus m... 245 1e-63 tr|Q3TLB1|Q3TLB1_MOUSE Putative uncharacterized protein OS=Mus m... 245 1e-63 tr|Q3TK17|Q3TK17_MOUSE Putative uncharacterized protein OS=Mus m... 245 1e-63 tr|Q3TJZ1|Q3TJZ1_MOUSE Putative uncharacterized protein OS=Mus m... 245 1e-63
>tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_217194 PE=4 SV=1 Length = 451
Score = 312 bits (800), Expect = 1e-83 Identities = 161/182 (88%), Positives = 168/182 (92%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
>tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189887 PE=4 SV=1 Length = 843
Score = 312 bits (800), Expect = 1e-83 Identities = 161/182 (88%), Positives = 168/182 (92%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
>tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020P07.3 PE=2 SV=2 Length = 843
Score = 311 bits (796), Expect = 3e-83 Identities = 161/182 (88%), Positives = 167/182 (91%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTF R Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
>tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subsp. japonica GN=P0461D06.32 PE=2 SV=1 Length = 843
Score = 311 bits (796), Expect = 3e-83 Identities = 161/182 (88%), Positives = 167/182 (91%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTF R Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
>tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H0613H07.5 PE=4 SV=1 Length = 843
Score = 311 bits (796), Expect = 3e-83 Identities = 161/182 (88%), Positives = 167/182 (91%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTF R Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
>tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07431 PE=4 SV=1 Length = 843
Score = 311 bits (796), Expect = 3e-83 Identities = 161/182 (88%), Positives = 167/182 (91%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTF R Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
>tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 Length = 843
Score = 310 bits (794), Expect = 5e-83 Identities = 160/182 (87%), Positives = 166/182 (91%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTAEELRAIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 DEAERGITIKSTGISLYYEM+++SLK+YKGE+DGN YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLYYEMTDESLKNYKGERDGNQYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTF R Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
>tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228450 PE=4 SV=1 Length = 545
Score = 306 bits (785), Expect = 5e-82 Identities = 159/182 (87%), Positives = 165/182 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKF+ EELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSAEELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 QDEA+RGITIKSTGISLYYEM+ +SLKDY GEKDG DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTSESLKDYHGEKDGCDYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQV+GEEAYQTFQR Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
>tr|A9U245|A9U245_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109208 PE=4 SV=1 Length = 843
Score = 306 bits (785), Expect = 5e-82 Identities = 159/182 (87%), Positives = 165/182 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKF+ EELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSAEELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 QDEA+RGITIKSTGISLYYEM+ +SLKDY GEKDG DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTSESLKDYHGEKDGCDYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQV+GEEAYQTFQR Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
>tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert sequence OS=Oryza sativa subsp. japonica GN=P0439E07.16 PE=2 SV=1 Length = 826
Score = 305 bits (780), Expect = 2e-81 Identities = 155/182 (85%), Positives = 166/182 (91%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EE+RRIMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVR+TD+R Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 465 DEAERGITIKSTGISLYYEMS++SLK YKG++DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 SDEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFQR 645 ITDGAL QTETVLRQALGERIRPVLTVNKMDRCFLELQV GEEAYQTF R Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAYQTFSR 180
Query: 646 VI 651 VI Sbjct: 181 VI 182
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