DK961249
Clone id TST39A01NGRL0009_J15
Library
Length 605
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_J15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGACGCTGGCGACGGAGGTGGAAAACTACATGAAAGATGTCATCCGCTTGTTAAACATA
TTACATGGGAAGGCTGATAAGGAAACCCCGGACGACCCCAGAAAAAACCTTTTCCCAACC
CCTTTCTCCTTCTGGGTAGCCAGTACTTTTGAGGGTGCCCCAGCTGAGCAGCAAGCTCTG
TTGGAGCTTGAAGATACTGCACAAAGGCTCAAGCGCGAGAAAGAAACGCTCCGAAATACG
TTGAACTATTTAAGTGCAGCAGCAGCTGTGAAAGATGTGTTTCCTTCTTCCTCTGGGTAA
AAGAGGATATCGGTGGCCCAGGCTCAGCCATCCTCTATTGCAGTGGCTTTCCTTGTTTTG
TATATTCGAAGACAAGAGCTGGATATGCAATGTGAAGCCTAGGTGTGCGATTTTTGCCAC
CTTGTTTGTGGTTGATGCTTGGTGGATGTTCTGCTGTATGAAACGGCGTCAAGCTGGGTG
CTGTTCGTGAGCTAAAGTGGAGGTATTGGTAAGGTTGTACACTTGCATTGCCCAATCTTT
TGGCAAGATGATTGATAATGAGGAAAATCGCAAAGCTTATCCGTGTAAAAAAAAAAAAAA
AAAAA
■■Homology search results ■■ -
sp_hit_id Q9YGL6
Definition sp|Q9YGL6|PALM_CHICK Paralemmin OS=Gallus gallus
Align length 55
Score (bit) 31.6
E-value 3.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961249|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_J15, 5'
(586 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9YGL6|PALM_CHICK Paralemmin OS=Gallus gallus GN=PALM PE=2 SV=1 32 3.1
sp|Q7Z7M1|GP144_HUMAN Probable G-protein coupled receptor 144 OS... 31 4.0
sp|B0DAD3|XPOT_LACBS Exportin-T OS=Laccaria bicolor (strain S238... 30 8.9

>sp|Q9YGL6|PALM_CHICK Paralemmin OS=Gallus gallus GN=PALM PE=2 SV=1
Length = 386

Score = 31.6 bits (70), Expect = 3.1
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1

Query: 184 ELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSSSG*KRISVAQAQPSSIAVA 348
ELE+T QRL+RE E+L N+ + S + + + K+ ++ Q S + A
Sbjct: 82 ELEETIQRLERELESLENSSSVTSTKENLAEAAAPAKEEKKENIPSVQKSPLGTA 136


>sp|Q7Z7M1|GP144_HUMAN Probable G-protein coupled receptor 144
OS=Homo sapiens GN=GPR144 PE=2 SV=1
Length = 963

Score = 31.2 bits (69), Expect = 4.0
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1

Query: 487 RTAPSLTPFHTAEHPPS-INHKQGGKNRTPRLHIAYPALVFEYTKQGKPLQ*RMAEPGPP 311
R AP L+ T+E P I H+ G + +H + + VF++T +G L EP P
Sbjct: 497 RLAPLLSTSMTSERPRMRIQHRHAGLSGVTVIHSWFTSRVFQHTLEGPDL-----EPQAP 551

Query: 310 ISS 302
SS
Sbjct: 552 ASS 554


>sp|B0DAD3|XPOT_LACBS Exportin-T OS=Laccaria bicolor (strain
S238N-H82) GN=LOS1 PE=3 SV=1
Length = 1066

Score = 30.0 bits (66), Expect = 8.9
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -2

Query: 534 WAMQVYNLTNTSTLAHEQHPA*RRFIQQNIHQASTTNKVAKIAHLGFTLHIQLLSSNIQN 355
W + ++ + +T H +HPA RF + N+ + H F Q L++ IQ+
Sbjct: 42 WRLALHIFVDQNTEGHRKHPAQARFFALRVLDEFFDNRFEPLDHESFQAIHQALTAYIQS 101

Query: 354 K 352
+
Sbjct: 102 E 102


tr_hit_id A9RQJ9
Definition tr|A9RQJ9|A9RQJ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 97
Score (bit) 158.0
E-value 2.0e-37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961249|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_J15, 5'
(586 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RQJ9|A9RQJ9_PHYPA Predicted protein OS=Physcomitrella paten... 158 2e-37
tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome... 146 1e-33
tr|Q9FWT4|Q9FWT4_ARATH F1B16.1 protein (Putative protease) (Prot... 142 2e-32
tr|Q8S9K2|Q8S9K2_ARATH At1g75460/F1B16_22 OS=Arabidopsis thalian... 142 2e-32
tr|Q9FXH3|Q9FXH3_ARATH F6F9.20 protein (Putative uncharacterized... 139 1e-31
tr|B4FFQ4|B4FFQ4_MAIZE Putative uncharacterized protein OS=Zea m... 135 2e-30
tr|Q6Z4A9|Q6Z4A9_ORYSJ Os07g0509700 protein OS=Oryza sativa subs... 134 4e-30
tr|A2YLQ2|A2YLQ2_ORYSI Putative uncharacterized protein OS=Oryza... 134 4e-30
tr|B6SMG8|B6SMG8_MAIZE Peptidase S16, lon OS=Zea mays PE=2 SV=1 133 6e-30
tr|A3BK70|A3BK70_ORYSJ Putative uncharacterized protein OS=Oryza... 102 2e-20
tr|A0YL65|A0YL65_9CYAN Peptidase S16, lon OS=Lyngbya sp. PCC 810... 83 1e-14
tr|A0ZFC3|A0ZFC3_NODSP Peptidase S16, lon OS=Nodularia spumigena... 78 4e-13
tr|B2J5B3|B2J5B3_NOSP7 Peptidase S16, lon domain protein OS=Nost... 76 1e-12
tr|Q8YP65|Q8YP65_ANASP All4335 protein OS=Anabaena sp. (strain P... 75 2e-12
tr|Q3MDM7|Q3MDM7_ANAVT Peptidase S16, lon OS=Anabaena variabilis... 75 2e-12
tr|Q2JTE4|Q2JTE4_SYNJA ATP-dependent protease La domain protein ... 74 8e-12
tr|B8HV46|B8HV46_9CHRO Peptidase S16 lon domain protein OS=Cyano... 73 1e-11
tr|Q55701|Q55701_SYNY3 ATP-dependent proteinase; BsgA OS=Synecho... 73 1e-11
tr|B1XI61|B1XI61_SYNP2 Putative ATP-dependent proteinase OS=Syne... 72 2e-11
tr|B0CCC8|B0CCC8_ACAM1 ATP-dependent protease La (LON) domain pr... 72 3e-11
tr|B7K102|B7K102_SYNP8 Peptidase S16 lon domain protein OS=Synec... 72 3e-11
tr|B4C239|B4C239_9CHRO Peptidase S16 lon domain protein OS=Cyano... 72 3e-11
tr|B5W7X9|B5W7X9_SPIMA Peptidase S16 lon domain protein OS=Arthr... 70 7e-11
tr|B1WW85|B1WW85_CYAA5 ATP-dependent protease OS=Cyanothece (str... 70 9e-11
tr|Q2JP14|Q2JP14_SYNJB ATP-dependent protease La domain protein ... 69 1e-10
tr|B7K832|B7K832_9CHRO Peptidase S16 lon domain protein OS=Cyano... 69 2e-10
tr|A3IYF2|A3IYF2_9CHRO Peptidase S16, lon OS=Cyanothece sp. CCY ... 69 2e-10
tr|B4VX12|B4VX12_9CYAN ATP-dependent protease La (LON) domain su... 69 3e-10
tr|Q4C268|Q4C268_CROWT Peptidase S16, lon N-terminal OS=Crocosph... 68 4e-10
tr|B4WS27|B4WS27_9SYNE ATP-dependent protease La (LON) domain su... 68 4e-10

>tr|A9RQJ9|A9RQJ9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_204775 PE=4 SV=1
Length = 181

Score = 158 bits (399), Expect = 2e-37
Identities = 79/97 (81%), Positives = 85/97 (87%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
E LA EVE YMKDVIRL N + GK DK+ P+D RK+LFPTPFSFWV STFEGAPAEQQAL
Sbjct: 84 EVLAAEVETYMKDVIRLSNRVSGKPDKDVPEDLRKSLFPTPFSFWVGSTFEGAPAEQQAL 143

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSS 291
LELEDTA RLKREKETLRNTLNYL+AA+AVKD FPSS
Sbjct: 144 LELEDTAVRLKREKETLRNTLNYLTAASAVKDAFPSS 180


>tr|A7NT45|A7NT45_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00014531001
PE=4 SV=1
Length = 284

Score = 146 bits (368), Expect = 1e-33
Identities = 77/97 (79%), Positives = 84/97 (86%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
E LA EVE YMKDVIRL N L+GK +KET D R+NLFPTPFSF+V STFEGAP EQQAL
Sbjct: 189 EALANEVETYMKDVIRLSNRLNGKPEKET-QDLRRNLFPTPFSFFVGSTFEGAPREQQAL 247

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSS 291
LELEDT+ RLKREKETLRNTLNYL+AA+AVKDVF SS
Sbjct: 248 LELEDTSARLKREKETLRNTLNYLTAASAVKDVFASS 284


>tr|Q9FWT4|Q9FWT4_ARATH F1B16.1 protein (Putative protease)
(Protease, putative) OS=Arabidopsis thaliana
GN=At1g75460 PE=2 SV=1
Length = 278

Score = 142 bits (357), Expect = 2e-32
Identities = 75/98 (76%), Positives = 85/98 (86%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
++LA EVE MK+VIRL N L+GKA+KE D R+N FPTPFSF+V STFEGAP EQQAL
Sbjct: 182 DSLANEVEVLMKEVIRLSNRLNGKAEKEV-QDLRRNQFPTPFSFFVGSTFEGAPREQQAL 240

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSSS 294
LELEDTA RLKRE+ETLRNTLNYL+AA+AVKDVFPSSS
Sbjct: 241 LELEDTAARLKRERETLRNTLNYLTAASAVKDVFPSSS 278


>tr|Q8S9K2|Q8S9K2_ARATH At1g75460/F1B16_22 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 278

Score = 142 bits (357), Expect = 2e-32
Identities = 75/98 (76%), Positives = 85/98 (86%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
++LA EVE MK+VIRL N L+GKA+KE D R+N FPTPFSF+V STFEGAP EQQAL
Sbjct: 182 DSLANEVEVLMKEVIRLSNRLNGKAEKEV-QDLRRNQFPTPFSFFVGSTFEGAPREQQAL 240

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSSS 294
LELEDTA RLKRE+ETLRNTLNYL+AA+AVKDVFPSSS
Sbjct: 241 LELEDTAARLKRERETLRNTLNYLTAASAVKDVFPSSS 278


>tr|Q9FXH3|Q9FXH3_ARATH F6F9.20 protein (Putative uncharacterized
protein At1g19740) OS=Arabidopsis thaliana GN=At1g19740
PE=2 SV=1
Length = 278

Score = 139 bits (350), Expect = 1e-31
Identities = 74/96 (77%), Positives = 82/96 (85%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
+ LA EVE MK+VIRL N L+GK DKE+ D RKN FPTPFSF+V STFEGAP EQQAL
Sbjct: 182 DELANEVEVLMKEVIRLSNRLNGKPDKES-QDLRKNQFPTPFSFFVGSTFEGAPMEQQAL 240

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPS 288
LELEDTA RLKRE+ETLRNTLNYL+AA+AVKDVFPS
Sbjct: 241 LELEDTAARLKRERETLRNTLNYLTAASAVKDVFPS 276


>tr|B4FFQ4|B4FFQ4_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 289

Score = 135 bits (340), Expect = 2e-30
Identities = 69/97 (71%), Positives = 82/97 (84%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
E LAT+VE M+DVIR+ N L+GK +KE D R+ LFPTPFSF+V +TFEGAP EQQAL
Sbjct: 190 EALATDVEALMRDVIRIANRLNGKPEKEV-GDLRRGLFPTPFSFYVGNTFEGAPREQQAL 248

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSS 291
LELEDTA RL+RE++TLRNTLNYL+AA+AVKD FPSS
Sbjct: 249 LELEDTAARLRRERDTLRNTLNYLTAASAVKDAFPSS 285


>tr|Q6Z4A9|Q6Z4A9_ORYSJ Os07g0509700 protein OS=Oryza sativa subsp.
japonica GN=P0409B11.11 PE=2 SV=1
Length = 291

Score = 134 bits (337), Expect = 4e-30
Identities = 68/97 (70%), Positives = 82/97 (84%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
E LAT+VE M+DVIR+ N L+GK +K+ D R+ LFPTPFSF+V +TFEGAP EQQAL
Sbjct: 192 EALATDVEALMRDVIRIANRLNGKPEKDV-GDLRRGLFPTPFSFYVGNTFEGAPREQQAL 250

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSS 291
LELEDTA RL+RE++TLRNTLNYL+AA+AVKD FPSS
Sbjct: 251 LELEDTAARLRRERDTLRNTLNYLTAASAVKDAFPSS 287


>tr|A2YLQ2|A2YLQ2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26152 PE=4 SV=1
Length = 291

Score = 134 bits (337), Expect = 4e-30
Identities = 68/97 (70%), Positives = 82/97 (84%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
E LAT+VE M+DVIR+ N L+GK +K+ D R+ LFPTPFSF+V +TFEGAP EQQAL
Sbjct: 192 EALATDVEALMRDVIRIANRLNGKPEKDV-GDLRRGLFPTPFSFYVGNTFEGAPREQQAL 250

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSS 291
LELEDTA RL+RE++TLRNTLNYL+AA+AVKD FPSS
Sbjct: 251 LELEDTAARLRRERDTLRNTLNYLTAASAVKDAFPSS 287


>tr|B6SMG8|B6SMG8_MAIZE Peptidase S16, lon OS=Zea mays PE=2 SV=1
Length = 286

Score = 133 bits (335), Expect = 6e-30
Identities = 68/97 (70%), Positives = 81/97 (83%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
E LA +VE M+DVIR+ N L+GK +KE D R+ LFPTPFSF+V +TFEGAP EQQAL
Sbjct: 187 EALAADVEALMRDVIRIANRLNGKPEKEV-GDLRRGLFPTPFSFYVGNTFEGAPREQQAL 245

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSS 291
LELEDTA RL+RE++TLRNTLNYL+AA+AVKD FPSS
Sbjct: 246 LELEDTAARLRRERDTLRNTLNYLTAASAVKDAFPSS 282


>tr|A3BK70|A3BK70_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_023442 PE=4 SV=1
Length = 291

Score = 102 bits (253), Expect = 2e-20
Identities = 57/97 (58%), Positives = 71/97 (73%)
Frame = +1

Query: 1 ETLATEVENYMKDVIRLLNILHGKADKETPDDPRKNLFPTPFSFWVASTFEGAPAEQQAL 180
E LAT+VE M+DVIR+ N L+GK +K+ + P S A+ FEGAP EQQ +
Sbjct: 192 EALATDVEALMRDVIRIANRLNGKPEKDVGTCGGASSPPLSPST-SATPFEGAPREQQGV 250

Query: 181 LELEDTAQRLKREKETLRNTLNYLSAAAAVKDVFPSS 291
LELEDTA RL+RE++TLRNTLNYL+AA+AVKD FPSS
Sbjct: 251 LELEDTAARLRRERDTLRNTLNYLTAASAVKDAFPSS 287