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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961257
Clone id TST39A01NGRL0009_J23
Library
Length 684
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_J23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TATATAAAGTTGGGACCTATGTTGAATGACAGGATAACTGCTAGAACTCTTCGTCTTGTG
GATGAAGATGGTAAAGGTCACAGGATTGTTTCTAGGGGTGAAGCATTTGTTACCGGGCCT
CGATTTAACACCTCGAACTTGTTTTGGTGGATGGAAAGCCAGATCCGCCCGTTTGCAAGA
TTTTCGATTTTCATAGGGAGCGATATAAGCGAGAGCAAGCTCTGAAGGAGAAAAAGAAGA
GCAAGGGTGCTGCAGCTAAGTTAAATGAAGTTAAGGAACTACGATACAGTGCAAAAACTG
AGCCAAAAGACCTCAAAATGAAAGTGCAGAAGGCAAAGCAGTTTTTGGAGCGAGGATATA
AAGTAAAGTTTGTGGCCAATTACAAAGGTTTCATTGAGGAGGAGGCAGACAGACGGGAAG
AAGGAAAAATGATTGATAAAGTCATTTCCATGTTGGACGATATGACGGTTATAGAACAAG
GCCCAAGGTATGAATCACGATTGGTTTGGGTAATGTTCAAACACATGAAGTTTGGAAAGG
TGAAGCGGAAGAAGCCACCAAAACCTGCACAGGAGGTTGATGCAAACATGGAGGGAGCTC
TAGTTGGCAATGGGTAACTACAGCCTGAATAGAGAGTAGCAAAAGCTGGAAGCTACGTCA
AGTTGGTGTATAAACTTGCCTGGC
■■Homology search results ■■ -
sp_hit_id A6Q167
Definition sp|A6Q167|IF3_NITSB Translation initiation factor IF-3 OS=Nitratiruptor sp. (strain SB155-2)
Align length 125
Score (bit) 73.6
E-value 2.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961257|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_J23, 5'
         (684 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6Q167|IF3_NITSB Translation initiation factor IF-3 OS=Nitrat...    74   2e-15
sp|Q8DIG8|IF3_THEEB Translation initiation factor IF-3 OS=Thermo...    65   2e-12
sp|A7ZAZ8|IF3_CAMC1 Translation initiation factor IF-3 OS=Campyl...    62   2e-12
sp|A7GVZ3|IF3_CAMC5 Translation initiation factor IF-3 OS=Campyl...    62   5e-12
sp|A0RRI8|IF3_CAMFF Translation initiation factor IF-3 OS=Campyl...    60   5e-12
sp|Q1DES4|IF3_MYXXD Translation initiation factor IF-3 OS=Myxoco...    71   5e-12
sp|P48516|IF3_MYXXA Translation initiation factor IF-3 OS=Myxoco...    71   5e-12
sp|Q5LQ58|IF3_SILPO Translation initiation factor IF-3 OS=Silici...    63   6e-12
sp|Q5HWW2|IF3_CAMJR Translation initiation factor IF-3 OS=Campyl...    62   8e-12
sp|A1VXT6|IF3_CAMJJ Translation initiation factor IF-3 OS=Campyl...    62   8e-12
sp|Q9PIS2|IF3_CAMJE Translation initiation factor IF-3 OS=Campyl...    62   8e-12
sp|A8FK08|IF3_CAMJ8 Translation initiation factor IF-3 OS=Campyl...    62   8e-12
sp|P72874|IF3_SYNY3 Translation initiation factor IF-3 OS=Synech...    64   1e-11
sp|A7H1S1|IF3_CAMJD Translation initiation factor IF-3 OS=Campyl...    62   1e-11
sp|Q3B0M2|IF3_SYNS9 Translation initiation factor IF-3 OS=Synech...    58   1e-11
sp|A5GQ34|IF3_SYNR3 Translation initiation factor IF-3 OS=Synech...    59   1e-11
sp|Q3ANG8|IF3_SYNSC Translation initiation factor IF-3 OS=Synech...    58   2e-11
sp|Q7UA08|IF3_SYNPX Translation initiation factor IF-3 OS=Synech...    57   2e-11
sp|A9F8E5|IF3_SORC5 Translation initiation factor IF-3 OS=Sorang...    69   2e-11
sp|Q318A5|IF3_PROM9 Translation initiation factor IF-3 OS=Prochl...    58   6e-11
sp|Q3MBH6|IF3_ANAVT Translation initiation factor IF-3 OS=Anabae...    63   6e-11
sp|Q8YNE3|IF3_ANASP Translation initiation factor IF-3 OS=Anabae...    63   6e-11
sp|B0JKQ1|IF3_MICAN Translation initiation factor IF-3 OS=Microc...    60   8e-11
sp|P0A3L1|IF3_LISMO Translation initiation factor IF-3 OS=Lister...    59   8e-11
sp|Q71YN3|IF3_LISMF Translation initiation factor IF-3 OS=Lister...    59   8e-11
sp|P0A3L2|IF3_LISIN Translation initiation factor IF-3 OS=Lister...    59   8e-11
sp|A8G7E2|IF3_PROM2 Translation initiation factor IF-3 OS=Prochl...    59   1e-10
sp|Q9X1S6|IF3_THEMA Translation initiation factor IF-3 OS=Thermo...    64   1e-10
sp|Q7V9N2|IF3_PROMA Translation initiation factor IF-3 OS=Prochl...    57   1e-10
sp|Q7M9L9|IF3_WOLSU Translation initiation factor IF-3 OS=Woline...    66   2e-10

>sp|A6Q167|IF3_NITSB Translation initiation factor IF-3
           OS=Nitratiruptor sp. (strain SB155-2) GN=infC PE=3 SV=1
          Length = 177

 Score = 73.6 bits (179), Expect(2) = 2e-15
 Identities = 42/125 (33%), Positives = 70/125 (56%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LVL+    +PPVCKI D+ + +Y++E+                EVKE++ S K    D
Sbjct: 46  LDLVLIAPNANPPVCKIMDYGKFKYQQEKKLKEAKKKQTKI----EVKEIKLSVKIAQND 101

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPRY 491
           +  KV+ A++FLE+G  VKF    +G   E A      ++++K+I +++D+ V+E+ P  
Sbjct: 102 IDYKVKHAREFLEKGKHVKFRVFLRG--REMAHPEAGVEVLEKIIPLIEDIGVVEKKPHL 159

Query: 492 ESRLV 506
           E R V
Sbjct: 160 EGRYV 164



 Score = 28.9 bits (63), Expect(2) = 2e-15
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 19  MLNDRITARTLRLVDEDGKGHRIVSRGEA 105
           +LN++I A  +R V +DG  + IVSR EA
Sbjct: 9   LLNEQIDAPEVRCVGDDGTQYGIVSRDEA 37


>sp|Q8DIG8|IF3_THEEB Translation initiation factor IF-3
           OS=Thermosynechococcus elongatus (strain BP-1) GN=infC
           PE=3 SV=1
          Length = 182

 Score = 65.1 bits (157), Expect(2) = 2e-12
 Identities = 37/123 (30%), Positives = 68/123 (55%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LVLV  K DPPVCKI D+ + R+++E+               ++VKE++   K E  D
Sbjct: 56  LDLVLVSDKADPPVCKIIDYGKFRFEQEK----KAREARKKQHTSDVKEVKMRYKIEEHD 111

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPRY 491
             + + +A++FL+ G KVK    ++G   + +   EE  +++++ + L  +  ++Q P+ 
Sbjct: 112 YNVCINRAERFLKAGDKVKATVTFRGREIQHSHLAEE--LLNRMANDLQAVAEVQQAPKQ 169

Query: 492 ESR 500
           E R
Sbjct: 170 EGR 172



 Score = 27.7 bits (60), Expect(2) = 2e-12
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 16  PMLNDRITARTLRLVDEDGKGHRIVSRGEA 105
           PM+N+RI    +R+VD DG    I+S  EA
Sbjct: 18  PMINERIHFPRVRVVDTDGSQLGIMSSQEA 47


>sp|A7ZAZ8|IF3_CAMC1 Translation initiation factor IF-3
           OS=Campylobacter concisus (strain 13826) GN=infC PE=3
           SV=2
          Length = 172

 Score = 62.4 bits (150), Expect(2) = 2e-12
 Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LVL+     PPVCKI D+ + RY++E+                E+KE++ S K    D
Sbjct: 45  LDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKTI----EIKEIKLSVKIAQND 100

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEG-KMIDKVISMLDDMTVIEQGPR 488
           +  KV+ A +FL+ G  VKF    KG    E    E G  M++KV  M+ D    ++ P 
Sbjct: 101 INYKVKHASEFLQDGKHVKFRVFLKG---REMSTPEAGVAMLEKVWEMIKDEADRDKEPI 157

Query: 489 YESRLV 506
            E R V
Sbjct: 158 IEGRYV 163



 Score = 30.4 bits (67), Expect(2) = 2e-12
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 19  MLNDRITARTLRLVDEDGKGHRIVSRGEA 105
           +LN+ I AR +R V +DG  + ++SR EA
Sbjct: 8   LLNEDIRAREVRCVGDDGTAYGVISRDEA 36


>sp|A7GVZ3|IF3_CAMC5 Translation initiation factor IF-3
           OS=Campylobacter curvus (strain 525.92) GN=infC PE=3
           SV=1
          Length = 172

 Score = 61.6 bits (148), Expect(2) = 5e-12
 Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LVLV     PPVCKI D+ + RY++E+                E+KE++ S K    D
Sbjct: 45  LDLVLVAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVI----EIKEIKLSIKIAQND 100

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEG-KMIDKVISMLDDMTVIEQGPR 488
           +  KV+ A +FL+ G  VKF    KG    E    E G  M++KV  ++ D+   ++ P 
Sbjct: 101 INYKVKHAVEFLQDGKHVKFRVFLKG---REMSTPEAGVAMLEKVWELVKDVADRDKEPL 157

Query: 489 YESRLV 506
            E R V
Sbjct: 158 VEGRYV 163



 Score = 29.6 bits (65), Expect(2) = 5e-12
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 19  MLNDRITARTLRLVDEDGKGHRIVSRGEA 105
           +LN+ I AR +R V +DG  + +VSR EA
Sbjct: 8   LLNEDIRAREVRCVGDDGTVYGVVSRDEA 36


>sp|A0RRI8|IF3_CAMFF Translation initiation factor IF-3
           OS=Campylobacter fetus subsp. fetus (strain 82-40)
           GN=infC PE=3 SV=1
          Length = 172

 Score = 60.5 bits (145), Expect(2) = 5e-12
 Identities = 40/125 (32%), Positives = 62/125 (49%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LVL+     PPVCKI D+ + RY++E+                EVKE++ S K    D
Sbjct: 45  LDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVI----EVKEIKLSVKIAQND 100

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPRY 491
           +  K++ A++FLE G  VKF    KG   E A       M++++  ++ D    ++ P  
Sbjct: 101 INYKIKHAQEFLEEGKHVKFRVFLKG--REMATPDIGVVMLERIWELVKDYADRDKVPAL 158

Query: 492 ESRLV 506
           E R V
Sbjct: 159 EGRYV 163



 Score = 30.8 bits (68), Expect(2) = 5e-12
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 22  LNDRITARTLRLVDEDGKGHRIVSRGEA 105
           LN+ I A  +R V +DG  + ++SRGEA
Sbjct: 9   LNEEIRASEVRCVGDDGTAYGVISRGEA 36


>sp|Q1DES4|IF3_MYXXD Translation initiation factor IF-3
           OS=Myxococcus xanthus (strain DK 1622) GN=infC PE=3 SV=1
          Length = 247

 Score = 71.2 bits (173), Expect = 5e-12
 Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
 Frame = +3

Query: 114 RASI*HLELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSA 293
           RA    L+LV +     PPVCKI D+ + +Y+ ++                 +KE++   
Sbjct: 47  RARTEGLDLVEISPMASPPVCKIMDYGKFKYEEKKKASEAKRAQVTVL----LKEVKLRP 102

Query: 294 KTEPKDLKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEG-KMIDKVISMLDDMTV 470
           KTE  D + KV+  ++F+E G K K V  ++G    E   RE+G  ++D V   L D+ V
Sbjct: 103 KTEEHDYEFKVRNTRRFIEDGNKAKVVIQFRG---REITHREQGTAILDDVAKDLKDVAV 159

Query: 471 IEQGPRYESRLVWVM 515
           +EQ PR E RL++++
Sbjct: 160 VEQMPRMEGRLMFMI 174


>sp|P48516|IF3_MYXXA Translation initiation factor IF-3
           OS=Myxococcus xanthus GN=infC PE=1 SV=2
          Length = 247

 Score = 71.2 bits (173), Expect = 5e-12
 Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
 Frame = +3

Query: 114 RASI*HLELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSA 293
           RA    L+LV +     PPVCKI D+ + +Y+ ++                 +KE++   
Sbjct: 47  RARTEGLDLVEISPMASPPVCKIMDYGKFKYEEKKKASEAKRAQVTVL----LKEVKLRP 102

Query: 294 KTEPKDLKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEG-KMIDKVISMLDDMTV 470
           KTE  D + KV+  ++F+E G K K V  ++G    E   RE+G  ++D V   L D+ V
Sbjct: 103 KTEEHDYEFKVRNTRRFIEDGNKAKVVIQFRG---REITHREQGTAILDDVAKDLKDVAV 159

Query: 471 IEQGPRYESRLVWVM 515
           +EQ PR E RL++++
Sbjct: 160 VEQMPRMEGRLMFMI 174


>sp|Q5LQ58|IF3_SILPO Translation initiation factor IF-3
           OS=Silicibacter pomeroyi GN=infC PE=3 SV=1
          Length = 182

 Score = 62.8 bits (151), Expect(2) = 6e-12
 Identities = 37/128 (28%), Positives = 68/128 (53%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LV +     PPVCKI DF + +Y++++              + EVKE+++   T+  D
Sbjct: 54  LDLVEISPNATPPVCKIMDFGKYKYEQQKRESEARKKQK----IIEVKEVKFRPNTDTHD 109

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPRY 491
            ++K++   +FLE G KVK    ++G   E A +    +++++V   + +M  IE  P+ 
Sbjct: 110 YEVKMRNVYKFLENGDKVKVTLRFRG--REMAHQNLGRELLERVAEDVKEMGKIENMPKM 167

Query: 492 ESRLVWVM 515
           E R + +M
Sbjct: 168 EGRQMIMM 175



 Score = 28.1 bits (61), Expect(2) = 6e-12
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 13  GPMLNDRITARTLRLVDEDGKGHRIVSRGEA 105
           GP +ND+I A  +RL+  DG+   +V   +A
Sbjct: 15  GPRVNDKIRASEIRLIGADGENVGVVHPAKA 45


>sp|Q5HWW2|IF3_CAMJR Translation initiation factor IF-3
           OS=Campylobacter jejuni (strain RM1221) GN=infC PE=3
           SV=1
          Length = 172

 Score = 62.4 bits (150), Expect(2) = 8e-12
 Identities = 37/125 (29%), Positives = 65/125 (52%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LV++     PPVCKI D+ + RY++E+                ++KE++ S K    D
Sbjct: 45  LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVI----DIKEIKLSVKIAQND 100

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPRY 491
           +  KV+ A +FLE+G  V+F    KG   E A       +++K+ +M+++    ++ P +
Sbjct: 101 INYKVKHALEFLEQGKHVRFRVFLKG--REMATPEAGVALLEKIWTMIENEANRDKEPNF 158

Query: 492 ESRLV 506
           E R V
Sbjct: 159 EGRYV 163



 Score = 28.1 bits (61), Expect(2) = 8e-12
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 19  MLNDRITARTLRLVDEDGKGHRIVSRGEA 105
           +LN+ I A  +R V +DGK + I+S  EA
Sbjct: 8   LLNEEIRADEIRCVGDDGKVYGIISSDEA 36


>sp|A1VXT6|IF3_CAMJJ Translation initiation factor IF-3
           OS=Campylobacter jejuni subsp. jejuni serotype O:23/36
           (strain 81-176) GN=infC PE=3 SV=1
          Length = 172

 Score = 62.4 bits (150), Expect(2) = 8e-12
 Identities = 37/125 (29%), Positives = 65/125 (52%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LV++     PPVCKI D+ + RY++E+                ++KE++ S K    D
Sbjct: 45  LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVI----DIKEIKLSVKIAQND 100

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPRY 491
           +  KV+ A +FLE+G  V+F    KG   E A       +++K+ +M+++    ++ P +
Sbjct: 101 INYKVKHALEFLEQGKHVRFRVFLKG--REMATPEAGVALLEKIWTMIENEANRDKEPNF 158

Query: 492 ESRLV 506
           E R V
Sbjct: 159 EGRYV 163



 Score = 28.1 bits (61), Expect(2) = 8e-12
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 19  MLNDRITARTLRLVDEDGKGHRIVSRGEA 105
           +LN+ I A  +R V +DGK + I+S  EA
Sbjct: 8   LLNEEIRADEIRCVGDDGKVYGIISSDEA 36
tr_hit_id A7P8E2
Definition tr|A7P8E2|A7P8E2_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera
Align length 133
Score (bit) 96.7
E-value 8.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961257|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_J23, 5'
         (684 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P8E2|A7P8E2_VITVI Chromosome chr3 scaffold_8, whole genome ...    97   8e-22
tr|Q6YU95|Q6YU95_ORYSJ Os02g0101100 protein OS=Oryza sativa subs...    91   4e-19
tr|B8AGU7|B8AGU7_ORYSI Putative uncharacterized protein OS=Oryza...    91   4e-19
tr|B4FAH7|B4FAH7_MAIZE Putative uncharacterized protein OS=Zea m...    90   2e-18
tr|A9S7Q4|A9S7Q4_PHYPA Predicted protein OS=Physcomitrella paten...    95   5e-18
tr|A9RKX4|A9RKX4_PHYPA Predicted protein OS=Physcomitrella paten...    93   1e-17
tr|A3A248|A3A248_ORYSJ Putative uncharacterized protein OS=Oryza...    75   1e-14
tr|A5US38|A5US38_ROSS1 Translation initiation factor IF-3 OS=Ros...    68   2e-12
tr|A9B183|A9B183_HERA2 Translation initiation factor IF-3 OS=Her...    70   2e-12
tr|A5Z3T1|A5Z3T1_9FIRM Translation initiation factor IF-3 OS=Eub...    72   7e-12
tr|B0NCV0|B0NCV0_EUBSP Translation initiation factor IF-3 OS=Clo...    70   7e-12
tr|Q4HJ53|Q4HJ53_CAMLA Translation initiation factor IF-3 OS=Cam...    64   7e-12
tr|B8G7I6|B8G7I6_9CHLR Translation initiation factor IF-3 OS=Chl...    66   9e-12
tr|A5ZMF3|A5ZMF3_9FIRM Translation initiation factor IF-3 OS=Rum...    67   2e-11
tr|A8SU23|A8SU23_9FIRM Translation initiation factor IF-3 OS=Cop...    65   2e-11
tr|A9WDM6|A9WDM6_CHLAA Translation initiation factor IF-3 OS=Chl...    65   2e-11
tr|B7IHT6|B7IHT6_9THEM Translation initiation factor IF-3 OS=The...    72   3e-11
tr|A7AZA0|A7AZA0_RUMGN Translation initiation factor IF-3 OS=Rum...    65   3e-11
tr|A7NJ63|A7NJ63_ROSCS Translation initiation factor IF-3 OS=Ros...    65   3e-11
tr|Q4HGF1|Q4HGF1_CAMCO Translation initiation factor IF-3 OS=Cam...    62   3e-11
tr|Q28RH7|Q28RH7_JANSC Translation initiation factor IF-3 OS=Jan...    65   4e-11
tr|A6QD01|A6QD01_SULNB Translation initiation factor IF-3 OS=Sul...    62   4e-11
tr|A8EQY3|A8EQY3_ARCB4 Translation initiation factor IF-3 OS=Arc...    64   6e-11
tr|A6BKH1|A6BKH1_9FIRM Translation initiation factor IF-3 OS=Dor...    70   6e-11
tr|Q08RH7|Q08RH7_STIAU Translation initiation factor IF-3 OS=Sti...    71   6e-11
tr|B6WBC2|B6WBC2_9FIRM Putative uncharacterized protein OS=Anaer...    60   7e-11
tr|A3ZF27|A3ZF27_CAMJE Translation initiation factor IF-3 OS=Cam...    63   7e-11
tr|B5CM71|B5CM71_9FIRM Putative uncharacterized protein OS=Rumin...    66   7e-11
tr|A5KGJ1|A5KGJ1_CAMJE Translation initiation factor IF-3 OS=Cam...    62   9e-11
tr|A3ZJT5|A3ZJT5_CAMJE Translation initiation factor IF-3 OS=Cam...    62   9e-11

>tr|A7P8E2|A7P8E2_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036146001
           PE=4 SV=1
          Length = 676

 Score = 96.7 bits (239), Expect(2) = 8e-22
 Identities = 50/133 (37%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKRE-QXXXXXXXXXXXXXXLNEVKELRYSAKTEPK 308
           L+LV V  K DPPVCKI DFHRE+YK++ +                + KE+R+S KTE K
Sbjct: 120 LDLVEVQRKADPPVCKIMDFHREKYKQQIKEKDRTKSKSELTLRKGDCKEVRFSGKTEAK 179

Query: 309 DLKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPR 488
           DLKMK    K+ ++RGY+VK +A          + ++ G ++ ++ S+++D+  +E GPR
Sbjct: 180 DLKMKADMVKRLMDRGYRVKCMA-------MGTEDQDLGGLLTRLSSLIEDVCFVESGPR 232

Query: 489 YESRLVWVMFKHM 527
            E R  +V+ +H+
Sbjct: 233 VEKRQAYVIVRHI 245



 Score = 31.2 bits (69), Expect(2) = 8e-22
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +1

Query: 13  GPMLNDRITARTLRLVDEDGKGHRIVSR 96
           GP +ND+I A  +RLV +D  GH IVSR
Sbjct: 83  GPRMNDQIRADFVRLVTDD--GHEIVSR 108


>tr|Q6YU95|Q6YU95_ORYSJ Os02g0101100 protein OS=Oryza sativa subsp.
           japonica GN=B1370C05.12 PE=2 SV=1
          Length = 519

 Score = 90.5 bits (223), Expect(2) = 4e-19
 Identities = 48/133 (36%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKRE-QXXXXXXXXXXXXXXLNEVKELRYSAKTEPK 308
           L+LV V  K DPPVCKI DFH+E+YK++ +                E KE+R+  KTE K
Sbjct: 101 LDLVEVHRKSDPPVCKIMDFHKEKYKKDVKEKERLKTKSAIVLRGGENKEVRFKGKTELK 160

Query: 309 DLKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPR 488
           DLK+K     + +ERGY+VK +A   G  EE+      G  + +++ ++ D+ ++E GP 
Sbjct: 161 DLKVKADGITRLMERGYRVKCMAMPSGNEEEDL-----GGPLSRLLGLIQDVCIVESGPH 215

Query: 489 YESRLVWVMFKHM 527
            +S+  +V+ +H+
Sbjct: 216 LDSKHAYVIVRHV 228



 Score = 28.1 bits (61), Expect(2) = 4e-19
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 13  GPMLNDRITARTLRLVDEDGKGHRIVSRGEAFVTGPRFN 129
           GP +N+ IT+  +RLV +  +GH +V R EA     R +
Sbjct: 64  GPRINNDITSPFVRLVTD--QGHSVVPRHEALQLAARMD 100


>tr|B8AGU7|B8AGU7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05453 PE=4 SV=1
          Length = 519

 Score = 90.5 bits (223), Expect(2) = 4e-19
 Identities = 48/133 (36%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKRE-QXXXXXXXXXXXXXXLNEVKELRYSAKTEPK 308
           L+LV V  K DPPVCKI DFH+E+YK++ +                E KE+R+  KTE K
Sbjct: 101 LDLVEVHRKSDPPVCKIMDFHKEKYKKDVKEKERLKTKSAIVLRGGENKEVRFKGKTELK 160

Query: 309 DLKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPR 488
           DLK+K     + +ERGY+VK +A   G  EE+      G  + +++ ++ D+ ++E GP 
Sbjct: 161 DLKVKADGITRLMERGYRVKCMAMPSGNEEEDL-----GGPLSRLLGLIQDVCIVESGPH 215

Query: 489 YESRLVWVMFKHM 527
            +S+  +V+ +H+
Sbjct: 216 LDSKHAYVIVRHV 228



 Score = 28.1 bits (61), Expect(2) = 4e-19
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 13  GPMLNDRITARTLRLVDEDGKGHRIVSRGEAFVTGPRFN 129
           GP +N+ IT+  +RLV +  +GH +V R EA     R +
Sbjct: 64  GPRINNDITSPFVRLVTD--QGHSVVPRHEALQLAARMD 100


>tr|B4FAH7|B4FAH7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 485

 Score = 90.1 bits (222), Expect(2) = 2e-18
 Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKRE-QXXXXXXXXXXXXXXLNEVKELRYSAKTEPK 308
           ++LV VD K DPPVCKI DFHRE+YK+E +                E KE+R+  KTE K
Sbjct: 109 MDLVEVDRKSDPPVCKIMDFHREKYKKETKEKERLKTKSAIVLRGGENKEVRFKGKTELK 168

Query: 309 DLKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPR 488
           DL +K     + +ERGY+VK +A   G   E+      G  + +++ ++ D+ ++E GP 
Sbjct: 169 DLMVKADGITRLMERGYRVKCMAMPSGNEGEDL-----GTPLSRLLGLIQDVCIVESGPH 223

Query: 489 YESRLVWVMFKHM 527
            +S+  +V+ +H+
Sbjct: 224 LDSKHAYVIVRHV 236



 Score = 26.2 bits (56), Expect(2) = 2e-18
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 13  GPMLNDRITARTLRLVDEDGKGHRIVSRGEA 105
           GP +N+ I A  +RLV ++  GH I+ R EA
Sbjct: 72  GPRMNNAIAAPFVRLVMDE--GHNILPRHEA 100


>tr|A9S7Q4|A9S7Q4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163323 PE=4 SV=1
          Length = 283

 Score = 94.7 bits (234), Expect = 5e-18
 Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LV VDGK DPPVCK+ DF +ER+K ++              L+++KE+R+S++TE KD
Sbjct: 132 LDLVEVDGKADPPVCKLMDFSKERFKVKKQEKDLRKKQLERRRLDDLKEVRFSSRTEQKD 191

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREE--GKMIDKVISMLDDMTVIEQGP 485
           L MK     + L RG++VK V  + G      D+ EE   K++++ +++L     +E GP
Sbjct: 192 LDMKADVVTRLLVRGHRVKLVVQFHG-----NDKGEEVGVKLLERAMNLLQAEFKVENGP 246

Query: 486 RYESRLVWVMFK 521
           R E    WVM +
Sbjct: 247 RVEKMRAWVMIR 258


>tr|A9RKX4|A9RKX4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_159713 PE=4 SV=1
          Length = 312

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LV VDGK DPPVCK+ DF RER+K ++              L+++KE+R+S++TE KD
Sbjct: 145 LDLVEVDGKADPPVCKLMDFSRERFKVKKQEKDLRKKQLERRRLDDLKEVRFSSRTEQKD 204

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREE--GKMIDKVISMLDDMTVIEQGP 485
           L+MK     + L RG++VK    + G      D+ EE   +++++ + +L     +E GP
Sbjct: 205 LEMKADVVTRLLTRGHRVKLAVQFHG-----NDKGEEVGVELLERAMRLLGVEVKVENGP 259

Query: 486 RYESRLVWVMFK 521
           R E    WVM +
Sbjct: 260 RVEKMRAWVMIR 271


>tr|A3A248|A3A248_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_004870 PE=4 SV=1
          Length = 515

 Score = 75.5 bits (184), Expect(2) = 1e-14
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKRE-QXXXXXXXXXXXXXXLNEVKELRYSAKTEPK 308
           L+LV V  K DPPVCKI DFH+E+YK++ +                E KE+R+  KTE K
Sbjct: 97  LDLVEVHRKSDPPVCKIMDFHKEKYKKDVKEKERLKTKSAIVLRGGENKEVRFKGKTELK 156

Query: 309 DLKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVI--------SMLDDM 464
           DLK+K     + +ERGY+VK +                 K+I  V           + D+
Sbjct: 157 DLKVKADGITRLMERGYRVKVL-------------NTNSKIILNVFLFGSAWRCPQIQDV 203

Query: 465 TVIEQGPRYESRLVWVMFKHM 527
            ++E GP  +S+  +V+ +H+
Sbjct: 204 CIVESGPHLDSKHAYVIVRHV 224



 Score = 28.1 bits (61), Expect(2) = 1e-14
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 13  GPMLNDRITARTLRLVDEDGKGHRIVSRGEAFVTGPRFN 129
           GP +N+ IT+  +RLV +  +GH +V R EA     R +
Sbjct: 60  GPRINNDITSPFVRLVTD--QGHSVVPRHEALQLAARMD 96


>tr|A5US38|A5US38_ROSS1 Translation initiation factor IF-3
           OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_1032 PE=3
           SV=1
          Length = 238

 Score = 68.2 bits (165), Expect(2) = 2e-12
 Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LV V     PPVC+I D+ + RY++ +                EVK++R   KT+  D
Sbjct: 70  LDLVEVAPNAVPPVCRILDYGKFRYEQSKKEREARKNQKQV----EVKQIRLEPKTDDHD 125

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEG-KMIDKVISMLDDMTVIEQGPR 488
           L++K ++A++FL  G KVKF   ++G    E   +E G +M++++   L D++V+EQ P 
Sbjct: 126 LEVKAKQARRFLLEGDKVKFNLRFRG---REIFHQEIGLEMLERMAEELRDISVVEQRPT 182

Query: 489 YESRLVWVM 515
            E R++ ++
Sbjct: 183 MEGRVLTLL 191



 Score = 28.1 bits (61), Expect(2) = 2e-12
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +1

Query: 22  LNDRITARTLRLVDEDGKGHRIVSRGEA 105
           +N+RI AR +RL+DE+G    IVS  +A
Sbjct: 34  INNRIRAREVRLIDENGAQIGIVSIRDA 61


>tr|A9B183|A9B183_HERA2 Translation initiation factor IF-3
           OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM
           785) GN=Haur_4639 PE=3 SV=1
          Length = 219

 Score = 70.1 bits (170), Expect(2) = 2e-12
 Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+LV V     PPVC++ D+ + RY++ +                E+KE+R   +T+  D
Sbjct: 55  LDLVEVAPNASPPVCRLMDYGKYRYEQTKKEREARKNQKQV----ELKEIRMQPRTDTHD 110

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGK-MIDKVISMLDDMTVIEQGPR 488
           L++KV  A++FLE G+KVKF   ++G    E    E G+ M++++   L D  V+EQ P 
Sbjct: 111 LQVKVNNARRFLEEGHKVKFSVRFRG---REITHPEIGREMLEQIAEDLRDHGVLEQKPT 167

Query: 489 YESR 500
            E R
Sbjct: 168 LEGR 171



 Score = 26.2 bits (56), Expect(2) = 2e-12
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 22  LNDRITARTLRLVDEDGKGHRIVSRGEA 105
           +N+RI  R +RL+DE+G    I++  +A
Sbjct: 19  INNRIRVREVRLIDENGNQVGIITTRDA 46


>tr|A5Z3T1|A5Z3T1_9FIRM Translation initiation factor IF-3
           OS=Eubacterium ventriosum ATCC 27560 GN=EUBVEN_00333
           PE=3 SV=1
          Length = 164

 Score = 72.0 bits (175), Expect(2) = 7e-12
 Identities = 40/123 (32%), Positives = 64/123 (52%)
 Frame = +3

Query: 132 LELVLVDGKPDPPVCKIFDFHRERYKREQXXXXXXXXXXXXXXLNEVKELRYSAKTEPKD 311
           L+L+ +  K  PPVCKI D+ + RY++++              + EVKE+R S   E  D
Sbjct: 38  LDLIKISPKAKPPVCKIMDYGKFRYEQQKREKEAKKKQH----IVEVKEIRLSPNVEIND 93

Query: 312 LKMKVQKAKQFLERGYKVKFVANYKGFIEEEADRREEGKMIDKVISMLDDMTVIEQGPRY 491
           LK K   A++F+E+G KVK    ++G   E A       ++D    ML+D+  + + P+ 
Sbjct: 94  LKTKANNARKFIEKGDKVKVTLRFRG--REMAHISSNAHVLDDFAKMLEDIASVVKAPKL 151

Query: 492 ESR 500
           E R
Sbjct: 152 EGR 154



 Score = 22.3 bits (46), Expect(2) = 7e-12
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +1

Query: 19  MLNDRITARTLRLVDEDGKGHRIVSRGEA 105
           M+N++I  R +R++  DG+   ++S  +A
Sbjct: 1   MINEQIRDREVRVIGTDGQQLGVMSSRDA 29