DK961263 |
Clone id |
TST39A01NGRL0009_K06 |
Library |
TST39 |
Length |
667 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_K06. 5' end sequence. |
Accession |
DK961263 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL703Contig1 |
Sequence |
CCTCTTTCCTGCGCGCATCTCGTCTGCCATTATTCGTCCGCTATGGAGTCCTTCTGTCCT GCCGATCGCCATGGCGAAGGTGTTTCTTTCGATCGGATGGTGTCTGAAGGCGTCCAGATG TGTCCTTTTCTCAGGAATATTGGCGTCTCAACCAATTTCTCCTTCTCGTCTCTCTCGAGA TTTCCTGCACCGGTGAGAGGAAATCATGGTCCCATATTTGAGGATGGCCCTAACTTTGAT CTGGCTTTCAAGCTATTTCATGGCCAAAATGGGGTGGTTCCCTTGTCGCAGCACTCTCAA TTGGGAGGTAAAAATGTTGAGGAACAAGCCTCTAGTATAAAATTCCATCCTTTAGCAGCT TCTTCAGCAGCCATAAGCTTATCAGCACTAAGAGCATCCGGTCCATTTGGCTTTGATGCG TTTATGTCAAAGAGATTACAGGCAAAGAAGAACAATAAACCTCATAAAAAGGAGAAACAG TATGAGGAGGAGAAGAAACGACCAGCTTCTTCGGAGCATGAAGCTTGGAGTAATGACTGG CTGCAGACAGGAAATTGCCCAATTGCCAAATCTTTCAGAGCTGTAAGTGGTGTGCTTCCG CTGGTTGCCAAGGTTCTACAGCCGCCTCCTGGTTTAAAGGTGCGGTGCCCGCCTGCCATT GTTGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P01134 |
Definition |
sp|P01134|TGFA_RAT Protransforming growth factor alpha OS=Rattus norvegicus |
Align length |
32 |
Score (bit) |
32.3 |
E-value |
2.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PI77 |
Definition |
tr|A7PI77|A7PI77_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
187 |
Score (bit) |
184.0 |
E-value |
3.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961263|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_K06, 5' (667 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PI77|A7PI77_VITVI Chromosome chr13 scaffold_17, whole genom... 184 3e-45 tr|A5BGJ2|A5BGJ2_VITVI Putative uncharacterized protein OS=Vitis... 184 3e-45 tr|A7QQ42|A7QQ42_VITVI Chromosome chr2 scaffold_140, whole genom... 177 4e-43 tr|Q9SW23|Q9SW23_ARATH Putative uncharacterized protein F13M23.1... 170 6e-41 tr|A5AQN7|A5AQN7_VITVI Putative uncharacterized protein OS=Vitis... 170 6e-41 tr|A9TXN3|A9TXN3_PHYPA Predicted protein (Fragment) OS=Physcomit... 167 5e-40 tr|B7FIB6|B7FIB6_MEDTR Putative uncharacterized protein OS=Medic... 167 7e-40 tr|A9RHT9|A9RHT9_PHYPA Predicted protein (Fragment) OS=Physcomit... 163 1e-38 tr|A9RHU0|A9RHU0_PHYPA Predicted protein (Fragment) OS=Physcomit... 162 2e-38 tr|Q9FRM3|Q9FRM3_ORYSA Putative uncharacterized protein OSJNBa00... 160 5e-38 tr|Q7XBR1|Q7XBR1_ORYSJ Os10g0580900 protein OS=Oryza sativa subs... 160 5e-38 tr|B4FFV1|B4FFV1_MAIZE Putative uncharacterized protein OS=Zea m... 160 7e-38 tr|Q9FHJ5|Q9FHJ5_ARATH Genomic DNA, chromosome 5, P1 clone:MFC19... 159 1e-37 tr|Q949T0|Q949T0_ARATH Putative uncharacterized protein At5g4541... 159 1e-37 tr|Q8L9B2|Q8L9B2_ARATH Putative uncharacterized protein OS=Arabi... 156 1e-36 tr|Q5VRL0|Q5VRL0_ORYSJ Putative uncharacterized protein OSJNBa00... 156 1e-36 tr|B8B7E8|B8B7E8_ORYSI Putative uncharacterized protein OS=Oryza... 156 1e-36 tr|B8B1M7|B8B1M7_ORYSI Putative uncharacterized protein OS=Oryza... 156 1e-36 tr|Q7XIM9|Q7XIM9_ORYSJ Os07g0159500 protein OS=Oryza sativa subs... 153 1e-35 tr|A3BGR4|A3BGR4_ORYSJ Putative uncharacterized protein OS=Oryza... 153 1e-35 tr|A3B7S6|A3B7S6_ORYSJ Putative uncharacterized protein OS=Oryza... 150 7e-35 tr|B6TF41|B6TF41_MAIZE Putative uncharacterized protein OS=Zea m... 144 4e-33 tr|B4F7U4|B4F7U4_MAIZE Putative uncharacterized protein OS=Zea m... 144 4e-33 tr|B8AVD3|B8AVD3_ORYSI Putative uncharacterized protein OS=Oryza... 99 2e-19 tr|Q0DF43|Q0DF43_ORYSJ Os06g0115800 protein (Fragment) OS=Oryza ... 88 5e-16 tr|A7Q4Z4|A7Q4Z4_VITVI Chromosome undetermined scaffold_51, whol... 61 7e-08 tr|A7PN65|A7PN65_VITVI Chromosome chr1 scaffold_22, whole genome... 51 6e-05 tr|A8SHV6|A8SHV6_9FIRM Putative uncharacterized protein OS=Faeca... 35 4.2 tr|A8S935|A8S935_9FIRM Putative uncharacterized protein OS=Faeca... 35 4.2 tr|Q5PPZ2|Q5PPZ2_XENLA LOC496037 protein OS=Xenopus laevis GN=tg... 34 7.1
>tr|A7PI77|A7PI77_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018226001 PE=4 SV=1 Length = 358
Score = 184 bits (468), Expect = 3e-45 Identities = 93/187 (49%), Positives = 117/187 (62%) Frame = +1
Query: 106 EGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPL 285 + + CPFLRNI TNFSF+S FP PVRG GPIFEDGPNFD+AF++FHG++GVVPL Sbjct: 22 QDILRCPFLRNINEPTNFSFASPMAFPMPVRGAKGPIFEDGPNFDMAFRVFHGRDGVVPL 81
Query: 286 SQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSKRLQAXXXXXXX 465 S L +N E + + +F+P GPF FD+F +K Sbjct: 82 SGRVFLRSENFEPEQAPPQFNPLAAKAATISLSGFGLGGPFSFDSFSNK-----WKNQKR 136
Query: 466 XXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPPGLKVR 645 + S+HEA SN+WL+TGNCPIAKS+RAVS V+P+VAK LQPPPG+K + Sbjct: 137 ESKSSKKEPSSQRGDSKHEAMSNEWLETGNCPIAKSYRAVSHVIPIVAKALQPPPGMKFK 196
Query: 646 CPPAIVA 666 CPPAIVA Sbjct: 197 CPPAIVA 203
>tr|A5BGJ2|A5BGJ2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005903 PE=4 SV=1 Length = 584
Score = 184 bits (468), Expect = 3e-45 Identities = 93/187 (49%), Positives = 117/187 (62%) Frame = +1
Query: 106 EGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPL 285 + + CPFLRNI TNFSF+S FP PVRG GPIFEDGPNFD+AF++FHG++GVVPL Sbjct: 248 QDILRCPFLRNINEPTNFSFASPMAFPMPVRGAKGPIFEDGPNFDMAFRVFHGRDGVVPL 307
Query: 286 SQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSKRLQAXXXXXXX 465 S L +N E + + +F+P GPF FD+F +K Sbjct: 308 SGRVFLRSENFEPEQAPPQFNPLAAKAATISLSGFGLGGPFSFDSFSNK-----WKNQKR 362
Query: 466 XXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPPGLKVR 645 + S+HEA SN+WL+TGNCPIAKS+RAVS V+P+VAK LQPPPG+K + Sbjct: 363 ESKSSKKEPSSQRGDSKHEAMSNEWLETGNCPIAKSYRAVSHVIPIVAKALQPPPGMKFK 422
Query: 646 CPPAIVA 666 CPPAIVA Sbjct: 423 CPPAIVA 429
>tr|A7QQ42|A7QQ42_VITVI Chromosome chr2 scaffold_140, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003198001 PE=4 SV=1 Length = 353
Score = 177 bits (450), Expect = 4e-43 Identities = 95/187 (50%), Positives = 115/187 (61%) Frame = +1
Query: 106 EGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPL 285 + +Q CPFLRNI T+FSF+S S F PVRG GPIFEDGPNFD+AFKLFHG++GVVPL Sbjct: 20 QDIQKCPFLRNINKPTSFSFTS-SNFSIPVRGARGPIFEDGPNFDMAFKLFHGKDGVVPL 78
Query: 286 SQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSKRLQAXXXXXXX 465 S S +N+ + ++ F+P GPF FD F K Sbjct: 79 SGRSSFHNENLVPEPVAL-FNPLAAKAATISLSAFGPGGPFSFDFFSEKWKNQKRKSESS 137
Query: 466 XXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPPGLKVR 645 SS+HEA N+WL+TGNCPIAKS+RAVS VLPLV K LQPPPG+K++ Sbjct: 138 NKKQSSSKGGD---SSKHEAMGNEWLKTGNCPIAKSYRAVSHVLPLVTKALQPPPGMKLK 194
Query: 646 CPPAIVA 666 CPPAIVA Sbjct: 195 CPPAIVA 201
>tr|Q9SW23|Q9SW23_ARATH Putative uncharacterized protein F13M23.170 (Putative uncharacterized protein At4g25030) (At4g25030) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=F13M23.170 PE=2 SV=1 Length = 344
Score = 170 bits (431), Expect = 6e-41 Identities = 91/181 (50%), Positives = 103/181 (56%) Frame = +1
Query: 121 CPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPLSQHSQ 300 CPFLRNI TN SFSS FP P R GPIFEDGPNFD AF+LFHGQ+GVVPLS ++ Sbjct: 19 CPFLRNINEPTNLSFSSSLPFPIPARAGKGPIFEDGPNFDTAFRLFHGQDGVVPLSDTAR 78
Query: 301 LGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSKRLQAXXXXXXXXXXXX 480 E Q FHP GPFGFDAF Sbjct: 79 -----TEAQKPVPVFHPLAAKAATISLSSFGSGGPFGFDAFSD-----------MFKNQK 122
Query: 481 XXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPPGLKVRCPPAI 660 + HEA ++WL+TGNCPIAKS+RAVSGV PLVAK+LQPPPG+K +CP AI Sbjct: 123 KKSDSSKNKGGNHEAMGDEWLKTGNCPIAKSYRAVSGVAPLVAKILQPPPGMKFKCPQAI 182
Query: 661 V 663 V Sbjct: 183 V 183
>tr|A5AQN7|A5AQN7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038296 PE=4 SV=1 Length = 381
Score = 170 bits (431), Expect = 6e-41 Identities = 97/212 (45%), Positives = 119/212 (56%), Gaps = 25/212 (11%) Frame = +1
Query: 106 EGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPL 285 + +Q CPFLRNI T+FSF+S S F PVRG GPIFEDGPNFD+AFKLFHG++GVVPL Sbjct: 20 QDIQKCPFLRNINKPTSFSFTS-SNFSIPVRGARGPIFEDGPNFDMAFKLFHGKDGVVPL 78
Query: 286 SQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSK----------- 432 S S +N+ + ++ F+P GPF FD F K Sbjct: 79 SGRSSFHNENLVPEPVAL-FNPLAAKAATISLSAFGPGGPFSFDFFSEKWKNQKRKSESS 137
Query: 433 -RLQAXXXXXXXXXXXXXXXXXXRPA-------------SSEHEAWSNDWLQTGNCPIAK 570 + Q+ A SS+HEA N+WL+TGNCPIAK Sbjct: 138 NKKQSSSKVMFGFRDINLTHSSQXQAPTYRMFISFQGGDSSKHEAMGNEWLKTGNCPIAK 197
Query: 571 SFRAVSGVLPLVAKVLQPPPGLKVRCPPAIVA 666 S+RAVS VLPLV K LQPPPG+K++CPPAIVA Sbjct: 198 SYRAVSHVLPLVTKALQPPPGMKLKCPPAIVA 229
>tr|A9TXN3|A9TXN3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_5113 PE=4 SV=1 Length = 290
Score = 167 bits (423), Expect = 5e-40 Identities = 95/194 (48%), Positives = 122/194 (62%), Gaps = 9/194 (4%) Frame = +1
Query: 112 VQMCPFLRNIGVSTNFSFSSLS-RFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPLS 288 V++CPFLRNIGV+T+F+FS+L+ PAP R GPIFEDGP F+ +F+LFHG++GVVPL+ Sbjct: 1 VELCPFLRNIGVTTSFAFSNLNFPVPAPRRAGRGPIFEDGPGFENSFRLFHGKDGVVPLA 60
Query: 289 QHSQLGGKNVEE------QASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSKR-LQAX 447 + S G + E +AS++ FHP GPFGFD FM+K+ ++ Sbjct: 61 RAS--GEQQSSEPLVNSTEASNLSFHPLSARAAAISLSPFGPAGPFGFDIFMAKQNVKKP 118
Query: 448 XXXXXXXXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVL-QP 624 S HEA S++WL TG CPIAKSFRAVSGVLPLV+K+L Q Sbjct: 119 SKKQPKKEPQPDKEHKSSLESHMHEAMSSEWLATGQCPIAKSFRAVSGVLPLVSKLLPQL 178
Query: 625 PPGLKVRCPPAIVA 666 P G+K RCPPAIVA Sbjct: 179 PKGMKYRCPPAIVA 192
>tr|B7FIB6|B7FIB6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 355
Score = 167 bits (422), Expect = 7e-40 Identities = 95/196 (48%), Positives = 113/196 (57%), Gaps = 4/196 (2%) Frame = +1
Query: 88 FDRMVSE-GVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHG 264 F R ++E + CPFLRNI TNFSF S FP P R GPIFEDGPNFDLAF+LFHG Sbjct: 4 FARDINEDSILRCPFLRNINEPTNFSFVSPLAFPMPARAAKGPIFEDGPNFDLAFRLFHG 63
Query: 265 QNGVVPLSQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSKRLQA 444 +GVVPLS+ + V +A +F+P GPFGFD+F K Sbjct: 64 SDGVVPLSERTFQCFDKVRPEAPKSQFNPLAAKAATISLSSFGFGGPFGFDSFHEK---- 119
Query: 445 XXXXXXXXXXXXXXXXXXRPAS---SEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKV 615 P+S S+HEA NDWLQ GNCPIAKS++AVS VLPLVAKV Sbjct: 120 -----WKNQNKKSKSSKKEPSSKDGSKHEA-GNDWLQNGNCPIAKSYQAVSKVLPLVAKV 173
Query: 616 LQPPPGLKVRCPPAIV 663 +QPP G+K +CP IV Sbjct: 174 IQPPAGMKYKCPQVIV 189
>tr|A9RHT9|A9RHT9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_51590 PE=4 SV=1 Length = 305
Score = 163 bits (412), Expect = 1e-38 Identities = 91/193 (47%), Positives = 116/193 (60%), Gaps = 8/193 (4%) Frame = +1
Query: 112 VQMCPFLRNIGVSTNFSFSSLS-RFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPLS 288 V++CPFLRNIGV+T+F+FS+L PAP R GPIFEDGP F+ +F+LFHG++GVVPL Sbjct: 1 VELCPFLRNIGVTTSFAFSNLKFPVPAPTRAGRGPIFEDGPGFENSFRLFHGKDGVVPLK 60
Query: 289 QHSQLGGKNVEE-----QASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSKR-LQAXX 450 + S G +N A + FHP GPFGFD FM+++ + Sbjct: 61 RAS--GEQNARSFTETLDAEDLSFHPLSARAATISLSSFGAGGPFGFDGFMARQNAKKPK 118
Query: 451 XXXXXXXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVL-QPP 627 + S HEA ++WL TG CPIAKSFRAVSGVLPLV+K+L + P Sbjct: 119 EKKPKKETEPEKKRRSKLESHMHEAMGSEWLATGQCPIAKSFRAVSGVLPLVSKLLPKLP 178
Query: 628 PGLKVRCPPAIVA 666 G+K RCPPAIVA Sbjct: 179 QGMKYRCPPAIVA 191
>tr|A9RHU0|A9RHU0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_51572 PE=4 SV=1 Length = 301
Score = 162 bits (410), Expect = 2e-38 Identities = 92/193 (47%), Positives = 114/193 (59%), Gaps = 8/193 (4%) Frame = +1
Query: 112 VQMCPFLRNIGVSTNFSFSSLSR-FPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPLS 288 V++CPFLRNIGVST+F FS L PAP R GPIFEDGP F+ +F+LFHG++GVVPL Sbjct: 1 VELCPFLRNIGVSTSFVFSKLKLPTPAPTRAGRGPIFEDGPGFENSFRLFHGKDGVVPLK 60
Query: 289 QHSQLGGKNVEE-----QASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSKR-LQAXX 450 + S G +N A + FHP GPFGFD FM+++ + Sbjct: 61 RAS--GEQNARSFTETLDAEDLSFHPLSARAATISLSSFGAGGPFGFDGFMARQNAKKPK 118
Query: 451 XXXXXXXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVL-QPP 627 + S HEA ++WL TG CPIAKSFRAVSGVLPLV+K+L + P Sbjct: 119 EKKPKKETEPEKKRRSKLESHMHEAMGSEWLATGQCPIAKSFRAVSGVLPLVSKLLPKLP 178
Query: 628 PGLKVRCPPAIVA 666 G+K RCPPAIVA Sbjct: 179 QGMKYRCPPAIVA 191
>tr|Q9FRM3|Q9FRM3_ORYSA Putative uncharacterized protein OSJNBa0056G17.7 OS=Oryza sativa GN=OSJNBa0056G17.7 PE=4 SV=1 Length = 352
Score = 160 bits (406), Expect = 5e-38 Identities = 87/192 (45%), Positives = 114/192 (59%) Frame = +1
Query: 91 DRMVSEGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQN 270 D V G++ CPFLRNI T+FSFSS++ FP P RG+ GPIFEDGPNFD+AF++FHGQ+ Sbjct: 17 DNSVQHGIERCPFLRNINEPTSFSFSSVN-FPVPARGDKGPIFEDGPNFDMAFRVFHGQD 75
Query: 271 GVVPLSQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXGPFGFDAFMSKRLQAXX 450 GVVPLS H + +F+P G F F F +KR + Sbjct: 76 GVVPLS-HGSFERFEKPMPKPNPEFNP--LAAKAATISLSAFGGFFSFGDFSNKRNKKNS 132
Query: 451 XXXXXXXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPP 630 + HEA SN+WL+ G CP+AKS+RA+SGV+PLVAK++ PP Sbjct: 133 NQKKPNNLPQNGG-----QPNNHEALSNEWLEMGQCPLAKSYRALSGVVPLVAKMMTPPA 187
Query: 631 GLKVRCPPAIVA 666 G+K+RCPPA+VA Sbjct: 188 GMKLRCPPAVVA 199
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