DK961268 [AcEST]

DK961268
Clone id	TST39A01NGRL0009_K11
Library	TST39
Length	628
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_K11. 5' end sequence.
Accession	DK961268
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL1470Contig1
Sequence	GCTGATCCTCCTGTTTTTCCTGGCATGTCGCAGTCCTCTGCTAGTCGCCATCCTCAGCTA CTGTGCCTCGCTGTGGCCCTGCTCCTGCTCGCTTCAGCACAGGCCGGAGCCGCCGTCAAC GTGTTTGATATCCGGCTGGATTCGTTTTACCGGGCCTTGAACCATGACCAATACCAGCCA TCCAAGGGTCTCCGTGGAGCTCGTAAAACGCTAATTTTTAATGAGGATTTCCTTACAAGT GCTGGAAAATTTGGACGACATTTGATTGCGGAAGGGGACTATCCTGACACTGGCGAAGCG AATACTTCGAATGATTCTACCGCACCCGTTGCAATATGAATCCCTTATGTCATTCTCTCT CGAGAATATGTGCATAGTGCATTCCCCATGTTGAAGCTCTTTATGTATTGTGTCAAGTTG GAACATATAATGTCCATGCTGATCGCACATCAAATAATTGCCTAAGTATTACTTTGGATA TGTTGTAATTAATCGATCGTAGACATGTTGCCCGCGGTGCAACGAAGGCATTTGTAGGTC TGTCTTGAGTTATGTAGACATGAGAACTTGTGCAATCAAGTGAGAGAGGTTTCTGTAATC ATACTCTAGTAGCTTTCAGAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	A6TFA8
Definition	sp\|A6TFA8\|NIKR_KLEP7 Nickel-responsive regulator OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Align length	73
Score (bit)	33.1
E-value	1.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK961268\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_K11, 5' (628 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|A6TFA8\|NIKR_KLEP7 Nickel-responsive regulator OS=Klebsiella p... 33 1.2 >sp\|A6TFA8\|NIKR_KLEP7 Nickel-responsive regulator OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=nikR PE=3 SV=1 Length = 132 Score = 33.1 bits (74), Expect = 1.2 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = -2 Query: 597 YRNLSHLIAQVLMSTLKTDLQMPSLHRGQHVYDRLITTYPKYLGNYLMCDQHGHYMFQ 418 Y N S + +L L D P RG V + + K L + L+ QH H+ Sbjct: 25 YHNRSEAVRDILRDA-LNQDPPSPESRRGYAVLS-YVYEHEKRELASRLVATQHHHHDLS 82 Query: 417 LDTIHKELQHGEC 379 + T+H + H +C Sbjct: 83 VATLHVHISHDDC 95
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK961268\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_K11, 5' (628 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****