DK961280
Clone id TST39A01NGRL0009_L01
Library
Length 673
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_L01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTTGCCCTTCCTCCTCTGCGTAACATTTTGTGAAGCGAGGGACGATCTGCCGTGAAAGGG
AGGTCGCCATGGCCGTCGTGGCATCGAAAGCTCTGTTGTCGTCCTCTCTCTCAACAACTA
CCGCTCCAGCGACTACCTCGCCCGACTGTTCCCGCCAGCAATTCTTGGGCGGGAGGGCTC
TCCGAGCAGCGGGCCCCTCTTCTTCCTCCAAGCGCGCGTCCTCCTTCACCGTTCGCGCAA
CCGCCGATAAGCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCTCCAAGCAAAGTCTAA
GCTATCTAGATGGCAGCCTTCCTGGTGACTTTGGGTTTGATCCCTTGGGTTTGATGGACC
CAGAGGGGCCTGGAGGCTTCATTGAACCTGATTGGTTGAGGTATGGAGAAATCATCAATG
GAAGATATGCAATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGATCCTTGGCAAGGCTG
GTCTCATCCCTCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAGTGATCCCACCTCTAG
GAACCTACAACTACTGGGCAGATCCCTACACGCTATTCGTCCTTGAGATGGCCCTCATGG
GCTTTGCTGAGCACCGAAGAGCACAGGATTATTATAAGCCTGGATCGATGGGAAAGCAGT
ATTTCTTAGGTTT
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 151
Score (bit) 263.0
E-value 8.0e-70
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961280|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_L01, 5'
(673 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl... 263 8e-70
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas... 261 3e-69
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl... 107 7e-23
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas... 104 5e-22
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla... 89 3e-17
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl... 87 8e-17
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl... 81 6e-15
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro... 70 1e-11
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c... 67 7e-11
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 65 2e-10
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas... 65 4e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas... 65 4e-10
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 64 6e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 64 7e-10
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 62 2e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 62 2e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 62 3e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 62 4e-09
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c... 61 5e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 61 6e-09
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 61 6e-09
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 60 8e-09
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 60 8e-09
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 60 1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty... 60 1e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 60 1e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 59 2e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 59 2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 59 2e-08
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 59 2e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
Length = 273

Score = 263 bits (671), Expect = 8e-70
Identities = 126/151 (83%), Positives = 133/151 (88%), Gaps = 2/151 (1%)
Frame = +3

Query: 225 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 398
F VRA + PVK +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 37 FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 399 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 578
YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97 AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 579 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
VLEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 157 VLEMALMGFAEHRRFQDWAKPGSMGKQYFLG 187


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
OS=Pisum sativum GN=lhca3 PE=1 SV=1
Length = 275

Score = 261 bits (666), Expect = 3e-69
Identities = 126/150 (84%), Positives = 132/150 (88%), Gaps = 3/150 (2%)
Frame = +3

Query: 231 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 401
VRA A PVK VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 40 VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 402 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 581
YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 582 LEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
LEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGKQYFLG 189


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Length = 270

Score = 107 bits (266), Expect = 7e-23
Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Frame = +3

Query: 150 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 329
++ FLGGR LR + TV AD DR LWF +LDGSLPGD
Sbjct: 30 TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 330 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 506
FGFDPLGL DPE W + E+++ R+AMLGA G PE+L K G++ +
Sbjct: 86 FGFDPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 507 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 644
W+ G Y+ D TLF++E+ L+G+AE RR D KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPG 176



Score = 33.9 bits (76), Expect = 0.80
Identities = 23/52 (44%), Positives = 26/52 (50%)
Frame = +3

Query: 297 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 452
L+ D PG FDPLG G G + LR EI NGR AML +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
OS=Petunia hybrida PE=2 SV=1
Length = 270

Score = 104 bits (259), Expect = 5e-22
Identities = 67/166 (40%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Frame = +3

Query: 150 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 329
++ FLGG+ LR + V A A P DR LWF +LDGSLPGD
Sbjct: 30 TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 330 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 506
FGFDPLGL DPE W E+++ R+AMLGA G PE L K G++ +
Sbjct: 86 FGFDPLGLGSDPE------SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 507 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 644
W+ G Y+ D TLFV+E+ L+G+AE RR D KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 176



Score = 33.9 bits (76), Expect = 0.80
Identities = 23/52 (44%), Positives = 26/52 (50%)
Frame = +3

Query: 297 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 452
L+ D PG FDPLG G G + LR EI NGR AML +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
Length = 252

Score = 88.6 bits (218), Expect = 3e-17
Identities = 63/178 (35%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Frame = +3

Query: 153 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 332
+ +FLGG ++G +A V+ + W S YL GSLPGD
Sbjct: 19 KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 333 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 509
GFDPLGL DPE F++ E++NGR+AMLG G + PE+ G+I
Sbjct: 75 GFDPLGLAEDPENLRWFVQ------AELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 510 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMG-----KQYFL 668
W+ G Y+A TLFV+E L + E RR QD PGS+ KQY L
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSL 177


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
Length = 251

Score = 87.0 bits (214), Expect = 8e-17
Identities = 58/149 (38%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Frame = +3

Query: 240 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEII 416
T+ V+ + W S YL GSL GD GFDPLGL DPE F++ E++
Sbjct: 45 TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQ------AELV 98

Query: 417 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 596
NGR+AMLG G + PE+ K G+I W+ G Y+A TLFV+E L
Sbjct: 99 NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 597 MGFAEHRRAQDYYKPGSMG-----KQYFL 668
+ E RR QD PGS+ KQY L
Sbjct: 150 FHYVEIRRWQDIKNPGSVNQDPIFKQYSL 178


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
PE=1 SV=1
Length = 231

Score = 80.9 bits (198), Expect = 6e-15
Identities = 54/128 (42%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +3

Query: 276 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 452
W QS +YLDGSL GD GFDPL L DPE F++ D ++NGR+AMLG G
Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQAD------VVNGRWAMLGVAGM 89

Query: 453 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDY 632
+ PE+L KAGL+ A W R +P G Y+A T + M+ + E RR QD
Sbjct: 90 LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS-STYVEIRRWQDI 140

Query: 633 YKPGSMGK 656
PGS+ +
Sbjct: 141 KNPGSVNQ 148


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
chloroplastic OS=Spinacia oleracea PE=2 SV=1
Length = 261

Score = 70.1 bits (170), Expect = 1e-11
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Frame = +3

Query: 303 YLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKA 479
+LDGSLPGDFGFDPLGL DP F++ W R E+I+GR+AML +G +G+A
Sbjct: 75 WLDGSLPGDFGFDPLGLGKDP----AFLK--WYREAELIHGRWAMLAVLGI----FVGQA 124

Query: 480 GLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 656
T + WF G P + +++ TL ++ LMG+ E +R D++ P S
Sbjct: 125 W-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSV 175

Query: 657 QY 662
++
Sbjct: 176 EW 177


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
SV=1
Length = 256

Score = 67.4 bits (163), Expect = 7e-11
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Frame = +3

Query: 225 FTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLR 401
FTV A A K + + +LDGSLPGD+GFDPLGL DP F++ W R
Sbjct: 44 FTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP----AFLK--WYR 97

Query: 402 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLF 578
E+I+GR+AM +G +G+A + + WF G P + +++ TL
Sbjct: 98 EAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLL 144

Query: 579 VLEMALMGFAEHRRAQDYYKPGSMGKQY 662
++ LMG+ E +R D++ P S ++
Sbjct: 145 GTQLILMGWVESKRWVDFFDPDSQSVEW 172


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
Length = 246

Score = 65.5 bits (158), Expect = 2e-10
Identities = 45/121 (37%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Frame = +3

Query: 276 WFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRY--GEIINGRYAMLGAVG 449
W + SYLDGS PGDFGFD LGL G + + RY E+I+ R+AML G
Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGL-------GEVPANLERYKESELIHCRWAMLAVPG 101

Query: 450 AIAPEILGKAGLI-PQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQ 626
I PE LG + QE A + G LG W T+ +E + F EH+R+
Sbjct: 102 IIVPEALGLGNWVKAQEWAAI--PGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSM 159

Query: 627 D 629
+
Sbjct: 160 E 160


tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 176
Score (bit) 274.0
E-value 4.0e-72
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961280|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_L01, 5'
(673 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein... 274 4e-72
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea... 268 3e-70
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul... 266 7e-70
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul... 266 9e-70
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ... 264 4e-69
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ... 263 7e-69
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome... 260 6e-68
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ... 258 2e-67
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot... 256 1e-66
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot... 256 1e-66
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot... 253 1e-65
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs... 251 2e-65
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza... 251 2e-65
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit... 249 1e-64
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten... 249 1e-64
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit... 249 1e-64
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot... 248 2e-64
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit... 248 2e-64
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar... 219 9e-56
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ... 217 6e-55
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-... 215 2e-54
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-... 215 2e-54
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr... 201 3e-50
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ... 201 3e-50
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ... 197 5e-49
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ... 197 5e-49
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c... 196 8e-49
tr|A2SY38|A2SY38_CHLIN Light-harvesting chlorophyll-a/b binding ... 194 4e-48
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr... 193 9e-48
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr... 190 8e-47

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
Length = 286

Score = 274 bits (700), Expect = 4e-72
Identities = 137/176 (77%), Positives = 147/176 (83%), Gaps = 3/176 (1%)
Frame = +3

Query: 153 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 323
+Q LGG+AL FTVR A+++KPVK DRQLWFAS QSLSYLDGSLP
Sbjct: 25 QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 324 GDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 503
GD+GFDPLGLMDPEGPGGF+EP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85 GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 504 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
+ WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY PGSMGKQYFLG
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPGSMGKQYFLG 200


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 289

Score = 268 bits (684), Expect = 3e-70
Identities = 131/152 (86%), Positives = 137/152 (90%), Gaps = 3/152 (1%)
Frame = +3

Query: 225 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDW 395
F VR A++ KPVK DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFIEP W
Sbjct: 51 FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 396 LRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 575
L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 576 FVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
FVLEMALMGFAEHRR QDY PGSM KQYFLG
Sbjct: 171 FVLEMALMGFAEHRRLQDYRYPGSMSKQYFLG 202


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 274

Score = 266 bits (681), Expect = 7e-70
Identities = 129/150 (86%), Positives = 134/150 (89%), Gaps = 1/150 (0%)
Frame = +3

Query: 225 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 401
F VRA + PVK +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 39 FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 402 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 581
YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99 YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 582 LEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
EMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 159 FEMALMGFAEHRRLQDWAKPGSMGKQYFLG 188


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 274

Score = 266 bits (680), Expect = 9e-70
Identities = 129/150 (86%), Positives = 134/150 (89%), Gaps = 1/150 (0%)
Frame = +3

Query: 225 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 401
F VRA + PVK +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 39 FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 402 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 581
YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99 YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 582 LEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
EMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 159 FEMALMGFAEHRRFQDWAKPGSMGKQYFLG 188


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
OS=Lycoris aurea PE=2 SV=1
Length = 275

Score = 264 bits (674), Expect = 4e-69
Identities = 131/175 (74%), Positives = 140/175 (80%), Gaps = 3/175 (1%)
Frame = +3

Query: 156 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 326
+Q LGGR ++ F V+A + PVK DRQLWFASKQSLSYLDGSLPG
Sbjct: 15 RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 327 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 506
DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG GAIAPEILGK GLIP ETA+
Sbjct: 75 DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 507 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLG 189


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
OS=Lycoris aurea PE=2 SV=1
Length = 275

Score = 263 bits (672), Expect = 7e-69
Identities = 131/175 (74%), Positives = 140/175 (80%), Gaps = 3/175 (1%)
Frame = +3

Query: 156 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 326
+Q LGGR ++ F V+A + PVK DRQLWFASKQSLSYLDGSLPG
Sbjct: 15 RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 327 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 506
DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG GAIAPEILGK GLIP ETA+
Sbjct: 75 DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 507 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLG
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLG 189


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
PE=4 SV=1
Length = 274

Score = 260 bits (664), Expect = 6e-68
Identities = 128/174 (73%), Positives = 138/174 (79%), Gaps = 2/174 (1%)
Frame = +3

Query: 156 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 329
+Q LG R L++ F VRA + PVK DR LWFASKQSL+YLDGSLPGD
Sbjct: 19 RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 330 FGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 509
+GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+
Sbjct: 74 YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 510 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
WF+TGV PP GTYNYWADPYTLFV EMALMGFAEHRR QD+ PGSMGKQYFLG
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLG 187


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
mays PE=2 SV=1
Length = 267

Score = 258 bits (660), Expect = 2e-67
Identities = 121/151 (80%), Positives = 130/151 (86%), Gaps = 2/151 (1%)
Frame = +3

Query: 225 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 398
F VRA++ P K DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 31 FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 399 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 578
YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91 AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 579 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
V MALMGFAEHRR QD+Y PGSMGKQYFLG
Sbjct: 151 VFNMALMGFAEHRRLQDWYNPGSMGKQYFLG 181


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
Length = 273

Score = 256 bits (653), Expect = 1e-66
Identities = 123/151 (81%), Positives = 130/151 (86%), Gaps = 2/151 (1%)
Frame = +3

Query: 225 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 398
F V+A A PVK +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37 FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 399 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 578
YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97 AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 579 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
VLEMALMGFAEHRR QD+Y PGSMGKQYFLG
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYFLG 187


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
Length = 273

Score = 256 bits (653), Expect = 1e-66
Identities = 123/151 (81%), Positives = 130/151 (86%), Gaps = 2/151 (1%)
Frame = +3

Query: 225 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 398
F V+A A PVK +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37 FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 399 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 578
YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97 AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 579 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLG 671
VLEMALMGFAEHRR QD+Y PGSMGKQYFLG
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYFLG 187