Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961283|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_L04, 5' (680 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 213 6e-78 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 213 5e-76 sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 195 6e-74 sp|Q00827|CB48_MAIZE Chlorophyll a-b binding protein 48, chlorop... 185 1e-70 sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2, chloropl... 211 2e-68 sp|P15773|CB2_MALDO Chlorophyll a-b binding protein AB10, chloro... 172 2e-57 sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 221 3e-57 sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 216 1e-55 sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop... 151 2e-55 sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 214 3e-55 sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 214 3e-55 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 214 3e-55 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 214 4e-55 sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 214 4e-55 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 214 4e-55 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 214 4e-55 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 213 6e-55 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 213 6e-55 sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 213 8e-55 sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 213 8e-55 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 212 1e-54 sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty... 212 1e-54 sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 212 1e-54 sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 211 3e-54 sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 211 3e-54 sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 211 3e-54 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 211 4e-54 sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 211 4e-54 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 211 4e-54 sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 209 8e-54
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1 Length = 274
Score = 213 bits (543), Expect(2) = 6e-78 Identities = 100/109 (91%), Positives = 106/109 (97%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532 AKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSL Sbjct: 101 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 160
Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 VHAQSILAIWACQVILMGAVEGYR+AGGPLGEV+DPIYPGG FDPLGLA Sbjct: 161 VHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 209
Score = 98.6 bits (244), Expect(2) = 6e-78 Identities = 49/64 (76%), Positives = 51/64 (79%), Gaps = 4/64 (6%) Frame = +1
Query: 166 GEARVQMR--SSKKSAPSGSI--WYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 333 GEARV MR ++KK S S WYG DR LYLGPFSG PPSYLTGEFPGDYGWDTAGLS Sbjct: 35 GEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 94
Query: 334 ADPE 345 ADPE Sbjct: 95 ADPE 98
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1 Length = 267
Score = 213 bits (541), Expect(2) = 5e-76 Identities = 100/109 (91%), Positives = 105/109 (96%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532 AKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL Sbjct: 94 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 153
Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 VHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGG FDPLGLA Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLA 202
Score = 92.8 bits (229), Expect(2) = 5e-76 Identities = 53/96 (55%), Positives = 57/96 (59%), Gaps = 5/96 (5%) Frame = +1
Query: 76 MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS---KKSAPSGSIWYGADR 240 MAAAT+ S SF G+A G + MR + K SGS WYG DR Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEI----TGNGKATMRKTVTKAKPVSSGSPWYGPDR 56
Query: 241 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348 YLGPFSG PSYLTGEFPGDYGWDTA LSADPET Sbjct: 57 VKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPET 92
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1 Length = 266
Score = 195 bits (495), Expect(2) = 6e-74 Identities = 90/109 (82%), Positives = 99/109 (90%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532 AKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWFKAG+QIF++GGLDY GNP+L Sbjct: 93 AKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNL 152
Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 +HAQSILAIWACQV+LMG +EGYRV GG LGE DP+ PGG FDPLGLA Sbjct: 153 IHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLA 201
Score = 103 bits (257), Expect(2) = 6e-74 Identities = 51/89 (57%), Positives = 58/89 (65%) Frame = +1
Query: 82 AATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLGPF 261 A+ + SSS GQ V +AR+ MR + +SAP SIWYG DRP YLGPF Sbjct: 4 ASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPE-SIWYGPDRPKYLGPF 62
Query: 262 SGSPPSYLTGEFPGDYGWDTAGLSADPET 348 S PSYLTGEFPGDYGWDTA +SADPET Sbjct: 63 SEGTPSYLTGEFPGDYGWDTAAVSADPET 91
>sp|Q00827|CB48_MAIZE Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1 Length = 264
Score = 185 bits (469), Expect(2) = 1e-70 Identities = 88/108 (81%), Positives = 95/108 (87%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532 AKNRELEVIH RWA+ LGCV PELLA+NGVKFGE VWFKAGSQIF++GGL + GNPSL Sbjct: 91 AKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSL 150
Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGL 676 VHAQSILAIWACQV+LMGAVEGY VAGG LGEV DP+Y GG FDPLGL Sbjct: 151 VHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGL 198
Score = 102 bits (255), Expect(2) = 1e-70 Identities = 49/64 (76%), Positives = 51/64 (79%), Gaps = 3/64 (4%) Frame = +1
Query: 166 GEARVQMRSSK---KSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 336 GE R+ MR + K A SGS WYGADR LYLGP SGSPPSYLTGEFPGDYGWDT GLSA Sbjct: 26 GEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSA 85
Query: 337 DPET 348 DPET Sbjct: 86 DPET 89
>sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1 Length = 256
Score = 211 bits (536), Expect(2) = 2e-68 Identities = 99/109 (90%), Positives = 106/109 (97%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532 AKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL Sbjct: 83 AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 142
Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 +HAQSILAIWA QVILMGAVEGYR+AGGPLGEV+DPIYPGG FDPLGLA Sbjct: 143 IHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 191
Score = 69.3 bits (168), Expect(2) = 2e-68 Identities = 47/94 (50%), Positives = 52/94 (55%), Gaps = 3/94 (3%) Frame = +1
Query: 76 MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMR-SSKKSAPSGSIWYGADRPL 246 MAA+T+ SSS GQA G RV MR ++ K+ SGS WYG DR Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPEL-----GVGRVSMRKTAPKTVSSGSPWYGPDRVK 55
Query: 247 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348 YLGPFSG PSYLTGEF GLSADPET Sbjct: 56 YLGPFSGEAPSYLTGEF--------HGLSADPET 81
>sp|P15773|CB2_MALDO Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1 Length = 268
Score = 172 bits (436), Expect(2) = 2e-57 Identities = 85/109 (77%), Positives = 95/109 (87%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532 AKNRELEVIH+R AM ALGC+ PELL+ G FGEAVWFKAG+QIF++GGLDYLGNPSL Sbjct: 96 AKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSL 155
Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 VHAQSILAIW +VILMGAVEGYR+A GPLGEV+DP+YP G FD LGLA Sbjct: 156 VHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYP-GSFDSLGLA 203
Score = 71.2 bits (173), Expect(2) = 2e-57 Identities = 41/65 (63%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Frame = +1
Query: 157 VTAGEARVQMRSSKKSAPSGSIWYGADRPL-YLGPFSGSPPSYLTGEFPGDYGWDTAGLS 333 VTAG ++ + KS S S DR + YLGPFSG PSYLTGEFPGDYGWDTAGLS Sbjct: 35 VTAGFT--MLKHAAKSKVSSST---CDRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLS 89
Query: 334 ADPET 348 A PET Sbjct: 90 AYPET 94
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1 Length = 265
Score = 221 bits (563), Expect = 3e-57 Identities = 111/124 (89%), Positives = 113/124 (91%) Frame = +2
Query: 308 TAGTPPDCPPTLKRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 487 TAG D P T AKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ Sbjct: 81 TAGLSAD-PETF---AKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136
Query: 488 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDP 667 IFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGG FDP Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196
Query: 668 LGLA 679 LGLA Sbjct: 197 LGLA 200
Score = 125 bits (314), Expect = 2e-28 Identities = 64/92 (69%), Positives = 70/92 (76%), Gaps = 1/92 (1%) Frame = +1
Query: 76 MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYL 252 MA +T L+S+F GQ V AGEARVQM + K APSGSIWYG+DRPLYL Sbjct: 1 MATSTAALTSTFSGQQLKPVNELSRK--VGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL 58
Query: 253 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348 GPFSGSPPSYL+GEFPGDYGWDTAGLSADPET Sbjct: 59 GPFSGSPPSYLSGEFPGDYGWDTAGLSADPET 90
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1 Length = 269
Score = 216 bits (549), Expect = 1e-55 Identities = 106/124 (85%), Positives = 114/124 (91%) Frame = +2
Query: 308 TAGTPPDCPPTLKRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 487 TAG D P T A+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q Sbjct: 84 TAGLSSD-PETF---ARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 139
Query: 488 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDP 667 IF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV+DPIYPGG FDP Sbjct: 140 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 199
Query: 668 LGLA 679 LGLA Sbjct: 200 LGLA 203
Score = 101 bits (252), Expect = 3e-21 Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 2/93 (2%) Frame = +1
Query: 76 MAAATVL-SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLY 249 MAAAT + S++ GQ+ + EARV MR + KSA S +IWYGADRP + Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60
Query: 250 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348 LGPFSG PSYL GEF GDYGWDTAGLS+DPET Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPET 93
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1 Length = 265
Score = 151 bits (382), Expect(2) = 2e-55 Identities = 81/112 (72%), Positives = 92/112 (82%), Gaps = 3/112 (2%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529 AKNR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAGSQIF+DGGLDYLGNP+ Sbjct: 90 AKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPN 149
Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGP-LGEVSDPIYPGGQ-FDPLGLA 679 LVHAQSILA+ QV+LMG VEG+R+ G P +GE +D +YPGGQ FDPLGLA Sbjct: 150 LVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLA 200
Score = 85.1 bits (209), Expect(2) = 2e-55 Identities = 46/96 (47%), Positives = 52/96 (54%) Frame = +1
Query: 58 SARSVAMAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGAD 237 S + A + V ++ F+GQ V G AR M S +WYG D Sbjct: 3 SMAATASSTTVVKATPFLGQTKNANPLRDV---VAMGSARFTM--------SNDLWYGPD 51
Query: 238 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPE 345 R YLGPFS PSYL GEFPGDYGWDTAGLSADPE Sbjct: 52 RVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPE 87
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1 Length = 267
Score = 214 bits (546), Expect = 3e-55 Identities = 105/124 (84%), Positives = 112/124 (90%) Frame = +2
Query: 308 TAGTPPDCPPTLKRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 487 TAG D P T AKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ Sbjct: 83 TAGLSAD-PETF---AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 138
Query: 488 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDP 667 IF++GGLDYLGNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV+DP+YPGG FDP Sbjct: 139 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDP 198
Query: 668 LGLA 679 LGLA Sbjct: 199 LGLA 202
Score = 93.2 bits (230), Expect = 1e-18 Identities = 51/95 (53%), Positives = 58/95 (61%), Gaps = 4/95 (4%) Frame = +1
Query: 76 MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAP--SGSIWYGADRP 243 M A+T+ S SF G A +T + ++ K+ P SGS WYG DR Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSE---ITGNGKAIMRKTVTKAKPVSSGSPWYGPDRV 57
Query: 244 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348 YLGPFSG PSYLTGEFPGDYGWDTAGLSADPET Sbjct: 58 KYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 92
|
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961283|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_L04, 5' (680 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 212 7e-77 tr|Q7Y1A1|Q7Y1A1_BRAOL Chlorophyll a/b binding protein OS=Brassi... 195 2e-71 tr|A9NQ87|A9NQ87_PICSI Putative uncharacterized protein OS=Picea... 173 9e-68 tr|A3FPF0|A3FPF0_NELNU Chlorophyll a/b-binding protein OS=Nelumb... 184 2e-64 tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten... 155 5e-62 tr|O80388|O80388_CRYJA Light-harvesting chlorophyll a/b-binding ... 234 3e-60 tr|Q9LE97|Q9LE97_BIGNA Light-harvesting complex protein LHCG11 (... 173 2e-59 tr|Q9LE96|Q9LE96_BIGNA Light-harvesting complex protein LHCG12 (... 173 3e-59 tr|Q9LE98|Q9LE98_BIGNA Light-harvesting complex protein LHCG4 (C... 172 2e-58 tr|Q7XYQ7|Q7XYQ7_BIGNA Chlorophyll a/b-binding protein II 1 OS=B... 172 2e-58 tr|B5A4I4|B5A4I4_GYMST Light harvesting complex protein LHCII-1 ... 171 3e-58 tr|Q33516|Q33516_HEDHE Light harvesting chlorophyll a /b binding... 208 8e-57 tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 219 1e-55 tr|A2SY21|A2SY21_MESVI Putative uncharacterized protein OS=Mesos... 162 2e-55 tr|A2SY19|A2SY19_MESVI Light-harvesting chlorophyll-a/b binding ... 162 2e-55 tr|A2ZV40|A2ZV40_ORYSJ Putative uncharacterized protein OS=Oryza... 162 3e-55 tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 217 5e-55 tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 217 6e-55 tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 216 8e-55 tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54 tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll ... 216 1e-54 tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll ... 216 1e-54 tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll ... 216 1e-54 tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll ... 216 1e-54 tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 216 1e-54 tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54 tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54 tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54 tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 215 2e-54 tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 215 2e-54
>tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea mays PE=2 SV=1 Length = 262
Score = 212 bits (540), Expect(2) = 7e-77 Identities = 98/112 (87%), Positives = 107/112 (95%) Frame = +2
Query: 344 KRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGN 523 K AKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLDYLGN Sbjct: 86 KTFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 145
Query: 524 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 PSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGG FDPLGLA Sbjct: 146 PSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 197
Score = 99.8 bits (247), Expect(2) = 7e-77 Identities = 47/64 (73%), Positives = 50/64 (78%), Gaps = 3/64 (4%) Frame = +1
Query: 166 GEARVQMRSS---KKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 336 GE R+ MR + K A SGS WYG DR YLGPFSG PPSYLTGEFPGDYGWDTAGLSA Sbjct: 24 GEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 83
Query: 337 DPET 348 DP+T Sbjct: 84 DPKT 87
>tr|Q7Y1A1|Q7Y1A1_BRAOL Chlorophyll a/b binding protein OS=Brassica oleracea PE=2 SV=1 Length = 273
Score = 195 bits (496), Expect(2) = 2e-71 Identities = 95/109 (87%), Positives = 100/109 (91%), Gaps = 1/109 (0%) Frame = +2
Query: 356 KNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLV 535 +NRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLV Sbjct: 94 RNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 536 HAQSILAIWACQVILMGAVEGYRVAG-GPLGEVSDPIYPGGQFDPLGLA 679 HAQSILAIWA QVILMGAVEGYRV G GPLGE D +YPGG FDPLGLA Sbjct: 154 HAQSILAIWATQVILMGAVEGYRVPGDGPLGEAEDLLYPGGSFDPLGLA 202
Score = 98.6 bits (244), Expect(2) = 2e-71 Identities = 54/95 (56%), Positives = 61/95 (64%), Gaps = 4/95 (4%) Frame = +1
Query: 76 MAAATVLSSS--FVGQAXXXXXXXXXXXXVTAGEARVQMRSS--KKSAPSGSIWYGADRP 243 MAA+T+ SS F G+A G RV MR + K PSGS WYG++R Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASE----VLGSGRVTMRKTVAKPKGPSGSPWYGSERV 56
Query: 244 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348 YLGPFSG PPSYLTG+FPGDYGWDTAGLSA PET Sbjct: 57 KYLGPFSGEPPSYLTGQFPGDYGWDTAGLSAVPET 91
>tr|A9NQ87|A9NQ87_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 253
Score = 173 bits (438), Expect(2) = 9e-68 Identities = 80/97 (82%), Positives = 89/97 (91%) Frame = +2
Query: 389 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWAC 568 +AMLGALGCV PELLAK GVKFGEAVWFKAG+QIF++GGLDYLGNP+L+HAQSILAIWA Sbjct: 92 FAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAS 151
Query: 569 QVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 QV+LMG +EGYRV GGPLGE DP+YPGG FDPLGLA Sbjct: 152 QVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLA 188
Score = 108 bits (270), Expect(2) = 9e-68 Identities = 54/89 (60%), Positives = 60/89 (67%) Frame = +1
Query: 82 AATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLGPF 261 A+ + SSS GQ V A +AR+ MR + +SAP SIWYG DRP YLGPF Sbjct: 4 ASAIQSSSLAGQTLLRPHQNELVKKVGASQARITMRRTVRSAPE-SIWYGPDRPKYLGPF 62
Query: 262 SGSPPSYLTGEFPGDYGWDTAGLSADPET 348 S PSYLTGEFPGDYGWDTAGLSADPET Sbjct: 63 SEQTPSYLTGEFPGDYGWDTAGLSADPET 91
>tr|A3FPF0|A3FPF0_NELNU Chlorophyll a/b-binding protein OS=Nelumbo nucifera GN=LHCP PE=2 SV=1 Length = 269
Score = 184 bits (466), Expect(2) = 2e-64 Identities = 84/109 (77%), Positives = 97/109 (88%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532 AKNRELEVIHARWAMLG +GC+ PELL +NGVK GEAVWFKAGSQIF D GL+YLG+P L Sbjct: 95 AKNRELEVIHARWAMLGTVGCIVPELLERNGVKIGEAVWFKAGSQIFRDEGLNYLGDPKL 154
Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 +HAQ+ILA+ A QVILMGA+EGYR++GGPLGE +DP+YPGG FDPL LA Sbjct: 155 IHAQNILAVLAAQVILMGAIEGYRISGGPLGEPTDPLYPGGNFDPLHLA 203
Score = 86.7 bits (213), Expect(2) = 2e-64 Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 3/64 (4%) Frame = +1
Query: 166 GEARVQMRSS---KKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 336 GE MRS+ + + +G WYG DR Y+GPFSG PSYLTGEFPGDYGWD+AGLSA Sbjct: 30 GEGGFTMRSTLSRPRQSITGGPWYGPDRVKYMGPFSGQTPSYLTGEFPGDYGWDSAGLSA 89
Query: 337 DPET 348 +PET Sbjct: 90 EPET 93
>tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223248 PE=4 SV=1 Length = 266
Score = 155 bits (393), Expect(2) = 5e-62 Identities = 80/112 (71%), Positives = 93/112 (83%), Gaps = 3/112 (2%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529 A+NR LE+IH RWAMLGALGC+TPELL K + V E VWFKAG+QIF+DGGLDYLGNP+ Sbjct: 91 ARNRALELIHGRWAMLGALGCITPELLQKYSRVTLKEPVWFKAGAQIFSDGGLDYLGNPN 150
Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGP-LGEVSDPIYPGGQ-FDPLGLA 679 L+HAQSILA+WA QV+LMGAVE YR G P +GE D +YPGG+ FDPLGLA Sbjct: 151 LIHAQSILAVWAVQVVLMGAVEAYRTNGLPGVGEGGD-LYPGGKYFDPLGLA 201
Score = 106 bits (265), Expect(2) = 5e-62 Identities = 57/92 (61%), Positives = 66/92 (71%), Gaps = 1/92 (1%) Frame = +1
Query: 76 MAAATVLSSS-FVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYL 252 MAAAT +S+ F GQ+ V + +ARV MR SK S SGS+WYG DRPL+L Sbjct: 1 MAAATACASTTFAGQSLLRPANELAQK-VGSNQARVVMRGSKSS--SGSMWYGPDRPLFL 57
Query: 253 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348 GPFSG+ PSYL GEFPGDYGWDTAGLSADPE+ Sbjct: 58 GPFSGNTPSYLKGEFPGDYGWDTAGLSADPES 89
>tr|O80388|O80388_CRYJA Light-harvesting chlorophyll a/b-binding protein of photosystem II OS=Cryptomeria japonica GN=CAB PE=2 SV=1 Length = 266
Score = 234 bits (598), Expect = 3e-60 Identities = 110/127 (86%), Positives = 118/127 (92%) Frame = +2
Query: 299 PVTTAGTPPDCPPTLKRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 478 PVTT GTPP C P + AKNRELEVIHARWAMLGALGCV PELL++NGVKFGEAVWFKA Sbjct: 75 PVTTGGTPPVCQPDPETFAKNRELEVIHARWAMLGALGCVFPELLSRNGVKFGEAVWFKA 134
Query: 479 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQ 658 GSQIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE++DP+YPGG Sbjct: 135 GSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEITDPLYPGGS 194
Query: 659 FDPLGLA 679 FDPLGLA Sbjct: 195 FDPLGLA 201
Score = 68.2 bits (165), Expect = 5e-10 Identities = 46/93 (49%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Frame = +1
Query: 76 MAAATVLSS-SFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAP-SGSIWYGADRPLY 249 MAA LSS +F GQ + GE RV MR AP S S WYG DR Y Sbjct: 1 MAAMAKLSSPAFAGQMVNGDFARQLRA-LNVGE-RVNMRRGATKAPVSSSPWYGPDRVKY 58
Query: 250 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348 LGPFSG PPSYLTGEFP G DPET Sbjct: 59 LGPFSGEPPSYLTGEFPVTTGGTPPVCQPDPET 91
>tr|Q9LE97|Q9LE97_BIGNA Light-harvesting complex protein LHCG11 (Chloroplast light-harvesting complex II protein Lhcbm3) OS=Bigelowiella natans PE=2 SV=1 Length = 333
Score = 173 bits (439), Expect(2) = 2e-59 Identities = 89/110 (80%), Positives = 91/110 (82%), Gaps = 1/110 (0%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529 A RE EVIHARWAMLGALGCVTPELLAK +GV E VWFKAGSQIFA+GGLDYLGNPS Sbjct: 159 AAYRETEVIHARWAMLGALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPS 218
Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 LVHAQSILAI ACQVILMG E YRV GGP GE D I PGG FDPLGLA Sbjct: 219 LVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLA 268
Score = 80.1 bits (196), Expect(2) = 2e-59 Identities = 39/61 (63%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Frame = +1
Query: 169 EARVQMRSSKKSAPSGSIWYGADRPLYLGPFS-GSPPSYLTGEFPGDYGWDTAGLSADPE 345 E Q+ K + WYG DR L+LGPFS GS PSYLTGEFPGDYGWDT GLSADP Sbjct: 97 EIAQQVTCQKIGGAACQEWYGPDRALWLGPFSEGSVPSYLTGEFPGDYGWDTQGLSADPN 156
Query: 346 T 348 T Sbjct: 157 T 157
>tr|Q9LE96|Q9LE96_BIGNA Light-harvesting complex protein LHCG12 (Chloroplast light-harvesting complex II protein Lhcbm7) OS=Bigelowiella natans PE=2 SV=1 Length = 346
Score = 173 bits (439), Expect(2) = 3e-59 Identities = 89/110 (80%), Positives = 91/110 (82%), Gaps = 1/110 (0%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529 A RE EVIHARWAMLGALGCVTPELLAK +GV E VWFKAGSQIFA+GGLDYLGNPS Sbjct: 172 AAYRETEVIHARWAMLGALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPS 231
Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 LVHAQSILAI ACQVILMG E YRV GGP GE D I PGG FDPLGLA Sbjct: 232 LVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLA 281
Score = 79.7 bits (195), Expect(2) = 3e-59 Identities = 36/43 (83%), Positives = 37/43 (86%), Gaps = 1/43 (2%) Frame = +1
Query: 223 WYGADRPLYLGPFS-GSPPSYLTGEFPGDYGWDTAGLSADPET 348 WYG DR L+LGPFS GS PSYLTGEFPGDYGWDT GLSADP T Sbjct: 128 WYGPDRALWLGPFSEGSVPSYLTGEFPGDYGWDTQGLSADPNT 170
>tr|Q9LE98|Q9LE98_BIGNA Light-harvesting complex protein LHCG4 (Chloroplast light-harvesting complex II protein Lhcbm2) OS=Bigelowiella natans PE=2 SV=1 Length = 345
Score = 172 bits (435), Expect(2) = 2e-58 Identities = 88/110 (80%), Positives = 90/110 (81%), Gaps = 1/110 (0%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529 A RE EVIHARWAMLG LGCVTPELLAK +GV E VWFKAGSQIFA+GGLDYLGNPS Sbjct: 171 AAYRETEVIHARWAMLGTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPS 230
Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 LVHAQSILAI ACQVILMG E YRV GGP GE D I PGG FDPLGLA Sbjct: 231 LVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLA 280
Score = 78.6 bits (192), Expect(2) = 2e-58 Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Frame = +1
Query: 169 EARVQMRSSKKSAPSGSIWYGADRPLYLGPFS-GSPPSYLTGEFPGDYGWDTAGLSADPE 345 E Q+ K + WYG DR L+LGPFS G+ PSYLTGEFPGDYGWDT GLSADP Sbjct: 109 EIAQQVTCQKIGGAACQEWYGPDRALWLGPFSEGAVPSYLTGEFPGDYGWDTQGLSADPT 168
Query: 346 T 348 T Sbjct: 169 T 169
>tr|Q7XYQ7|Q7XYQ7_BIGNA Chlorophyll a/b-binding protein II 1 OS=Bigelowiella natans PE=2 SV=1 Length = 346
Score = 172 bits (435), Expect(2) = 2e-58 Identities = 88/110 (80%), Positives = 90/110 (81%), Gaps = 1/110 (0%) Frame = +2
Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529 A RE EVIHARWAMLG LGCVTPELLAK +GV E VWFKAGSQIFA+GGLDYLGNPS Sbjct: 172 AAYRETEVIHARWAMLGTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPS 231
Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679 LVHAQSILAI ACQVILMG E YRV GGP GE D I PGG FDPLGLA Sbjct: 232 LVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLA 281
Score = 78.6 bits (192), Expect(2) = 2e-58 Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Frame = +1
Query: 169 EARVQMRSSKKSAPSGSIWYGADRPLYLGPFS-GSPPSYLTGEFPGDYGWDTAGLSADPE 345 E Q+ K + WYG DR L+LGPFS G+ PSYLTGEFPGDYGWDT GLSADP Sbjct: 110 EIAQQVTCQKIGGAACQEWYGPDRALWLGPFSEGAVPSYLTGEFPGDYGWDTQGLSADPT 169
Query: 346 T 348 T Sbjct: 170 T 170
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