DK961283
Clone id TST39A01NGRL0009_L04
Library
Length 680
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_L04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AATTAGCATCCCAAGTCGCAACAGCACATATTGCACTCTTCCCCGCAAGCGTTTCTCTCT
GCAAGGAGTGTCGCAATGGCAGCTGCCACAGTGCTCTCTTCCTCATTTGTGGGGCAAGCC
TCTCTTCTGCGGGAGAGCAATGAGCTGTCCAGCAGGGTAACGGCAGGCGAGGCCCGCGTG
CAGATGAGGTCCTCGAAGAAGTCGGCACCCTCGGGTAGCATCTGGTATGGCGCCGACCGC
CCTCTCTACTTGGGCCCTTTTTCAGGCTCTCCCCCATCCTACCTGACGGGTGAGTTCCCC
GGTGACTACGGCTGGGACACCGCCGGACTGTCCGCCGACCCTGAAACGTGTCGCCAAGAA
CCGAGAACTAGAGGTTATCCACGCCAGATGGGCCATGCTGGGCGCCCTGGGCTGCGTCAC
CCCTGAGCTGCTGGCCAAGAACGGCGTCAAGTTCGGCGAGGCTGTCTGGTTCAAGGCCGG
CTCTCAGATCTTCGCCGACGGCGGCCTGGACTACCTAGGCAACCCCAGCCTGGTGCACGC
GCAGAGCATCCTCGCCATCTGGGCCTGCCAGGTCATTCTCATGGGCGCTGTGGAGGGCTA
CCGAGTCGCCGGCGGCCCGTTGGGCGAGGTGTCCGACCCCATCTACCCGGGTGGCCAGTT
CGACCCACTGGGCCTGGCCG
■■Homology search results ■■ -
sp_hit_id P15194
Definition sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris
Align length 109
Score (bit) 213.0
E-value 6.0e-78
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961283|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_L04, 5'
(680 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 213 6e-78
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 213 5e-76
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 195 6e-74
sp|Q00827|CB48_MAIZE Chlorophyll a-b binding protein 48, chlorop... 185 1e-70
sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2, chloropl... 211 2e-68
sp|P15773|CB2_MALDO Chlorophyll a-b binding protein AB10, chloro... 172 2e-57
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 221 3e-57
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 216 1e-55
sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop... 151 2e-55
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 214 3e-55
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 214 3e-55
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 214 3e-55
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 214 4e-55
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 214 4e-55
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 214 4e-55
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 214 4e-55
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 213 6e-55
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 213 6e-55
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 213 8e-55
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 213 8e-55
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 212 1e-54
sp|P08222|CB22_CUCSA Chlorophyll a-b binding protein of LHCII ty... 212 1e-54
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 212 1e-54
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 211 3e-54
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 211 3e-54
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 211 3e-54
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 211 4e-54
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 211 4e-54
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 211 4e-54
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 209 8e-54

>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member
1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1
Length = 274

Score = 213 bits (543), Expect(2) = 6e-78
Identities = 100/109 (91%), Positives = 106/109 (97%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532
AKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSL
Sbjct: 101 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 160

Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
VHAQSILAIWACQVILMGAVEGYR+AGGPLGEV+DPIYPGG FDPLGLA
Sbjct: 161 VHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 209



Score = 98.6 bits (244), Expect(2) = 6e-78
Identities = 49/64 (76%), Positives = 51/64 (79%), Gaps = 4/64 (6%)
Frame = +1

Query: 166 GEARVQMR--SSKKSAPSGSI--WYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 333
GEARV MR ++KK S S WYG DR LYLGPFSG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 35 GEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 94

Query: 334 ADPE 345
ADPE
Sbjct: 95 ADPE 98


>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R,
chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1
Length = 267

Score = 213 bits (541), Expect(2) = 5e-76
Identities = 100/109 (91%), Positives = 105/109 (96%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532
AKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL
Sbjct: 94 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 153

Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
VHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGG FDPLGLA
Sbjct: 154 VHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLA 202



Score = 92.8 bits (229), Expect(2) = 5e-76
Identities = 53/96 (55%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Frame = +1

Query: 76 MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS---KKSAPSGSIWYGADR 240
MAAAT+ S SF G+A G + MR + K SGS WYG DR
Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEI----TGNGKATMRKTVTKAKPVSSGSPWYGPDR 56

Query: 241 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348
YLGPFSG PSYLTGEFPGDYGWDTA LSADPET
Sbjct: 57 VKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPET 92


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
chloroplastic OS=Pinus thunbergii PE=2 SV=1
Length = 266

Score = 195 bits (495), Expect(2) = 6e-74
Identities = 90/109 (82%), Positives = 99/109 (90%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532
AKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWFKAG+QIF++GGLDY GNP+L
Sbjct: 93 AKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNL 152

Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
+HAQSILAIWACQV+LMG +EGYRV GG LGE DP+ PGG FDPLGLA
Sbjct: 153 IHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLA 201



Score = 103 bits (257), Expect(2) = 6e-74
Identities = 51/89 (57%), Positives = 58/89 (65%)
Frame = +1

Query: 82 AATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLGPF 261
A+ + SSS GQ V +AR+ MR + +SAP SIWYG DRP YLGPF
Sbjct: 4 ASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPE-SIWYGPDRPKYLGPF 62

Query: 262 SGSPPSYLTGEFPGDYGWDTAGLSADPET 348
S PSYLTGEFPGDYGWDTA +SADPET
Sbjct: 63 SEGTPSYLTGEFPGDYGWDTAAVSADPET 91


>sp|Q00827|CB48_MAIZE Chlorophyll a-b binding protein 48,
chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1
Length = 264

Score = 185 bits (469), Expect(2) = 1e-70
Identities = 88/108 (81%), Positives = 95/108 (87%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532
AKNRELEVIH RWA+ LGCV PELLA+NGVKFGE VWFKAGSQIF++GGL + GNPSL
Sbjct: 91 AKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSL 150

Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGL 676
VHAQSILAIWACQV+LMGAVEGY VAGG LGEV DP+Y GG FDPLGL
Sbjct: 151 VHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGL 198



Score = 102 bits (255), Expect(2) = 1e-70
Identities = 49/64 (76%), Positives = 51/64 (79%), Gaps = 3/64 (4%)
Frame = +1

Query: 166 GEARVQMRSSK---KSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 336
GE R+ MR + K A SGS WYGADR LYLGP SGSPPSYLTGEFPGDYGWDT GLSA
Sbjct: 26 GEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSA 85

Query: 337 DPET 348
DPET
Sbjct: 86 DPET 89


>sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2,
chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1
Length = 256

Score = 211 bits (536), Expect(2) = 2e-68
Identities = 99/109 (90%), Positives = 106/109 (97%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532
AKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL
Sbjct: 83 AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 142

Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
+HAQSILAIWA QVILMGAVEGYR+AGGPLGEV+DPIYPGG FDPLGLA
Sbjct: 143 IHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 191



Score = 69.3 bits (168), Expect(2) = 2e-68
Identities = 47/94 (50%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +1

Query: 76 MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMR-SSKKSAPSGSIWYGADRPL 246
MAA+T+ SSS GQA G RV MR ++ K+ SGS WYG DR
Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPEL-----GVGRVSMRKTAPKTVSSGSPWYGPDRVK 55

Query: 247 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348
YLGPFSG PSYLTGEF GLSADPET
Sbjct: 56 YLGPFSGEAPSYLTGEF--------HGLSADPET 81


>sp|P15773|CB2_MALDO Chlorophyll a-b binding protein AB10,
chloroplastic OS=Malus domestica PE=3 SV=1
Length = 268

Score = 172 bits (436), Expect(2) = 2e-57
Identities = 85/109 (77%), Positives = 95/109 (87%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532
AKNRELEVIH+R AM ALGC+ PELL+ G FGEAVWFKAG+QIF++GGLDYLGNPSL
Sbjct: 96 AKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSL 155

Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
VHAQSILAIW +VILMGAVEGYR+A GPLGEV+DP+YP G FD LGLA
Sbjct: 156 VHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYP-GSFDSLGLA 203



Score = 71.2 bits (173), Expect(2) = 2e-57
Identities = 41/65 (63%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1

Query: 157 VTAGEARVQMRSSKKSAPSGSIWYGADRPL-YLGPFSGSPPSYLTGEFPGDYGWDTAGLS 333
VTAG ++ + KS S S DR + YLGPFSG PSYLTGEFPGDYGWDTAGLS
Sbjct: 35 VTAGFT--MLKHAAKSKVSSST---CDRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLS 89

Query: 334 ADPET 348
A PET
Sbjct: 90 AYPET 94


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 221 bits (563), Expect = 3e-57
Identities = 111/124 (89%), Positives = 113/124 (91%)
Frame = +2

Query: 308 TAGTPPDCPPTLKRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 487
TAG D P T AKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 81 TAGLSAD-PETF---AKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 488 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDP 667
IFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGG FDP
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196

Query: 668 LGLA 679
LGLA
Sbjct: 197 LGLA 200



Score = 125 bits (314), Expect = 2e-28
Identities = 64/92 (69%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Frame = +1

Query: 76 MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYL 252
MA +T L+S+F GQ V AGEARVQM + K APSGSIWYG+DRPLYL
Sbjct: 1 MATSTAALTSTFSGQQLKPVNELSRK--VGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL 58

Query: 253 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348
GPFSGSPPSYL+GEFPGDYGWDTAGLSADPET
Sbjct: 59 GPFSGSPPSYLSGEFPGDYGWDTAGLSADPET 90


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269

Score = 216 bits (549), Expect = 1e-55
Identities = 106/124 (85%), Positives = 114/124 (91%)
Frame = +2

Query: 308 TAGTPPDCPPTLKRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 487
TAG D P T A+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVWFKAG+Q
Sbjct: 84 TAGLSSD-PETF---ARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQ 139

Query: 488 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDP 667
IF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV+DPIYPGG FDP
Sbjct: 140 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDP 199

Query: 668 LGLA 679
LGLA
Sbjct: 200 LGLA 203



Score = 101 bits (252), Expect = 3e-21
Identities = 54/93 (58%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Frame = +1

Query: 76 MAAATVL-SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLY 249
MAAAT + S++ GQ+ + EARV MR + KSA S +IWYGADRP +
Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 250 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348
LGPFSG PSYL GEF GDYGWDTAGLS+DPET
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPET 93


>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
Length = 265

Score = 151 bits (382), Expect(2) = 2e-55
Identities = 81/112 (72%), Positives = 92/112 (82%), Gaps = 3/112 (2%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529
AKNR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAGSQIF+DGGLDYLGNP+
Sbjct: 90 AKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPN 149

Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGP-LGEVSDPIYPGGQ-FDPLGLA 679
LVHAQSILA+ QV+LMG VEG+R+ G P +GE +D +YPGGQ FDPLGLA
Sbjct: 150 LVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLA 200



Score = 85.1 bits (209), Expect(2) = 2e-55
Identities = 46/96 (47%), Positives = 52/96 (54%)
Frame = +1

Query: 58 SARSVAMAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGAD 237
S + A + V ++ F+GQ V G AR M S +WYG D
Sbjct: 3 SMAATASSTTVVKATPFLGQTKNANPLRDV---VAMGSARFTM--------SNDLWYGPD 51

Query: 238 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPE 345
R YLGPFS PSYL GEFPGDYGWDTAGLSADPE
Sbjct: 52 RVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPE 87


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
Length = 267

Score = 214 bits (546), Expect = 3e-55
Identities = 105/124 (84%), Positives = 112/124 (90%)
Frame = +2

Query: 308 TAGTPPDCPPTLKRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 487
TAG D P T AKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 83 TAGLSAD-PETF---AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 138

Query: 488 IFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDP 667
IF++GGLDYLGNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV+DP+YPGG FDP
Sbjct: 139 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDP 198

Query: 668 LGLA 679
LGLA
Sbjct: 199 LGLA 202



Score = 93.2 bits (230), Expect = 1e-18
Identities = 51/95 (53%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Frame = +1

Query: 76 MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAP--SGSIWYGADRP 243
M A+T+ S SF G A +T + ++ K+ P SGS WYG DR
Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSE---ITGNGKAIMRKTVTKAKPVSSGSPWYGPDRV 57

Query: 244 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348
YLGPFSG PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 58 KYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET 92


tr_hit_id B6STN4
Definition tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea mays
Align length 112
Score (bit) 212.0
E-value 7.0e-77
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961283|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_L04, 5'
(680 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 212 7e-77
tr|Q7Y1A1|Q7Y1A1_BRAOL Chlorophyll a/b binding protein OS=Brassi... 195 2e-71
tr|A9NQ87|A9NQ87_PICSI Putative uncharacterized protein OS=Picea... 173 9e-68
tr|A3FPF0|A3FPF0_NELNU Chlorophyll a/b-binding protein OS=Nelumb... 184 2e-64
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten... 155 5e-62
tr|O80388|O80388_CRYJA Light-harvesting chlorophyll a/b-binding ... 234 3e-60
tr|Q9LE97|Q9LE97_BIGNA Light-harvesting complex protein LHCG11 (... 173 2e-59
tr|Q9LE96|Q9LE96_BIGNA Light-harvesting complex protein LHCG12 (... 173 3e-59
tr|Q9LE98|Q9LE98_BIGNA Light-harvesting complex protein LHCG4 (C... 172 2e-58
tr|Q7XYQ7|Q7XYQ7_BIGNA Chlorophyll a/b-binding protein II 1 OS=B... 172 2e-58
tr|B5A4I4|B5A4I4_GYMST Light harvesting complex protein LHCII-1 ... 171 3e-58
tr|Q33516|Q33516_HEDHE Light harvesting chlorophyll a /b binding... 208 8e-57
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 219 1e-55
tr|A2SY21|A2SY21_MESVI Putative uncharacterized protein OS=Mesos... 162 2e-55
tr|A2SY19|A2SY19_MESVI Light-harvesting chlorophyll-a/b binding ... 162 2e-55
tr|A2ZV40|A2ZV40_ORYSJ Putative uncharacterized protein OS=Oryza... 162 3e-55
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 217 5e-55
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 217 6e-55
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 216 8e-55
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54
tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll ... 216 1e-54
tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll ... 216 1e-54
tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll ... 216 1e-54
tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll ... 216 1e-54
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 216 1e-54
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 215 2e-54
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 215 2e-54

>tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
mays PE=2 SV=1
Length = 262

Score = 212 bits (540), Expect(2) = 7e-77
Identities = 98/112 (87%), Positives = 107/112 (95%)
Frame = +2

Query: 344 KRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGN 523
K AKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLDYLGN
Sbjct: 86 KTFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 145

Query: 524 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
PSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGG FDPLGLA
Sbjct: 146 PSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 197



Score = 99.8 bits (247), Expect(2) = 7e-77
Identities = 47/64 (73%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Frame = +1

Query: 166 GEARVQMRSS---KKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 336
GE R+ MR + K A SGS WYG DR YLGPFSG PPSYLTGEFPGDYGWDTAGLSA
Sbjct: 24 GEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 83

Query: 337 DPET 348
DP+T
Sbjct: 84 DPKT 87


>tr|Q7Y1A1|Q7Y1A1_BRAOL Chlorophyll a/b binding protein OS=Brassica
oleracea PE=2 SV=1
Length = 273

Score = 195 bits (496), Expect(2) = 2e-71
Identities = 95/109 (87%), Positives = 100/109 (91%), Gaps = 1/109 (0%)
Frame = +2

Query: 356 KNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLV 535
+NRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLV
Sbjct: 94 RNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153

Query: 536 HAQSILAIWACQVILMGAVEGYRVAG-GPLGEVSDPIYPGGQFDPLGLA 679
HAQSILAIWA QVILMGAVEGYRV G GPLGE D +YPGG FDPLGLA
Sbjct: 154 HAQSILAIWATQVILMGAVEGYRVPGDGPLGEAEDLLYPGGSFDPLGLA 202



Score = 98.6 bits (244), Expect(2) = 2e-71
Identities = 54/95 (56%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Frame = +1

Query: 76 MAAATVLSSS--FVGQAXXXXXXXXXXXXVTAGEARVQMRSS--KKSAPSGSIWYGADRP 243
MAA+T+ SS F G+A G RV MR + K PSGS WYG++R
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASE----VLGSGRVTMRKTVAKPKGPSGSPWYGSERV 56

Query: 244 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348
YLGPFSG PPSYLTG+FPGDYGWDTAGLSA PET
Sbjct: 57 KYLGPFSGEPPSYLTGQFPGDYGWDTAGLSAVPET 91


>tr|A9NQ87|A9NQ87_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 253

Score = 173 bits (438), Expect(2) = 9e-68
Identities = 80/97 (82%), Positives = 89/97 (91%)
Frame = +2

Query: 389 WAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWAC 568
+AMLGALGCV PELLAK GVKFGEAVWFKAG+QIF++GGLDYLGNP+L+HAQSILAIWA
Sbjct: 92 FAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAS 151

Query: 569 QVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
QV+LMG +EGYRV GGPLGE DP+YPGG FDPLGLA
Sbjct: 152 QVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLA 188



Score = 108 bits (270), Expect(2) = 9e-68
Identities = 54/89 (60%), Positives = 60/89 (67%)
Frame = +1

Query: 82 AATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLGPF 261
A+ + SSS GQ V A +AR+ MR + +SAP SIWYG DRP YLGPF
Sbjct: 4 ASAIQSSSLAGQTLLRPHQNELVKKVGASQARITMRRTVRSAPE-SIWYGPDRPKYLGPF 62

Query: 262 SGSPPSYLTGEFPGDYGWDTAGLSADPET 348
S PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 63 SEQTPSYLTGEFPGDYGWDTAGLSADPET 91


>tr|A3FPF0|A3FPF0_NELNU Chlorophyll a/b-binding protein OS=Nelumbo
nucifera GN=LHCP PE=2 SV=1
Length = 269

Score = 184 bits (466), Expect(2) = 2e-64
Identities = 84/109 (77%), Positives = 97/109 (88%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSL 532
AKNRELEVIHARWAMLG +GC+ PELL +NGVK GEAVWFKAGSQIF D GL+YLG+P L
Sbjct: 95 AKNRELEVIHARWAMLGTVGCIVPELLERNGVKIGEAVWFKAGSQIFRDEGLNYLGDPKL 154

Query: 533 VHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
+HAQ+ILA+ A QVILMGA+EGYR++GGPLGE +DP+YPGG FDPL LA
Sbjct: 155 IHAQNILAVLAAQVILMGAIEGYRISGGPLGEPTDPLYPGGNFDPLHLA 203



Score = 86.7 bits (213), Expect(2) = 2e-64
Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Frame = +1

Query: 166 GEARVQMRSS---KKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 336
GE MRS+ + + +G WYG DR Y+GPFSG PSYLTGEFPGDYGWD+AGLSA
Sbjct: 30 GEGGFTMRSTLSRPRQSITGGPWYGPDRVKYMGPFSGQTPSYLTGEFPGDYGWDSAGLSA 89

Query: 337 DPET 348
+PET
Sbjct: 90 EPET 93


>tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_223248 PE=4 SV=1
Length = 266

Score = 155 bits (393), Expect(2) = 5e-62
Identities = 80/112 (71%), Positives = 93/112 (83%), Gaps = 3/112 (2%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529
A+NR LE+IH RWAMLGALGC+TPELL K + V E VWFKAG+QIF+DGGLDYLGNP+
Sbjct: 91 ARNRALELIHGRWAMLGALGCITPELLQKYSRVTLKEPVWFKAGAQIFSDGGLDYLGNPN 150

Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGP-LGEVSDPIYPGGQ-FDPLGLA 679
L+HAQSILA+WA QV+LMGAVE YR G P +GE D +YPGG+ FDPLGLA
Sbjct: 151 LIHAQSILAVWAVQVVLMGAVEAYRTNGLPGVGEGGD-LYPGGKYFDPLGLA 201



Score = 106 bits (265), Expect(2) = 5e-62
Identities = 57/92 (61%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Frame = +1

Query: 76 MAAATVLSSS-FVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYL 252
MAAAT +S+ F GQ+ V + +ARV MR SK S SGS+WYG DRPL+L
Sbjct: 1 MAAATACASTTFAGQSLLRPANELAQK-VGSNQARVVMRGSKSS--SGSMWYGPDRPLFL 57

Query: 253 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348
GPFSG+ PSYL GEFPGDYGWDTAGLSADPE+
Sbjct: 58 GPFSGNTPSYLKGEFPGDYGWDTAGLSADPES 89


>tr|O80388|O80388_CRYJA Light-harvesting chlorophyll a/b-binding
protein of photosystem II OS=Cryptomeria japonica GN=CAB
PE=2 SV=1
Length = 266

Score = 234 bits (598), Expect = 3e-60
Identities = 110/127 (86%), Positives = 118/127 (92%)
Frame = +2

Query: 299 PVTTAGTPPDCPPTLKRVAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKA 478
PVTT GTPP C P + AKNRELEVIHARWAMLGALGCV PELL++NGVKFGEAVWFKA
Sbjct: 75 PVTTGGTPPVCQPDPETFAKNRELEVIHARWAMLGALGCVFPELLSRNGVKFGEAVWFKA 134

Query: 479 GSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQ 658
GSQIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE++DP+YPGG
Sbjct: 135 GSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEITDPLYPGGS 194

Query: 659 FDPLGLA 679
FDPLGLA
Sbjct: 195 FDPLGLA 201



Score = 68.2 bits (165), Expect = 5e-10
Identities = 46/93 (49%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1

Query: 76 MAAATVLSS-SFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAP-SGSIWYGADRPLY 249
MAA LSS +F GQ + GE RV MR AP S S WYG DR Y
Sbjct: 1 MAAMAKLSSPAFAGQMVNGDFARQLRA-LNVGE-RVNMRRGATKAPVSSSPWYGPDRVKY 58

Query: 250 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPET 348
LGPFSG PPSYLTGEFP G DPET
Sbjct: 59 LGPFSGEPPSYLTGEFPVTTGGTPPVCQPDPET 91


>tr|Q9LE97|Q9LE97_BIGNA Light-harvesting complex protein LHCG11
(Chloroplast light-harvesting complex II protein Lhcbm3)
OS=Bigelowiella natans PE=2 SV=1
Length = 333

Score = 173 bits (439), Expect(2) = 2e-59
Identities = 89/110 (80%), Positives = 91/110 (82%), Gaps = 1/110 (0%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529
A RE EVIHARWAMLGALGCVTPELLAK +GV E VWFKAGSQIFA+GGLDYLGNPS
Sbjct: 159 AAYRETEVIHARWAMLGALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPS 218

Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
LVHAQSILAI ACQVILMG E YRV GGP GE D I PGG FDPLGLA
Sbjct: 219 LVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLA 268



Score = 80.1 bits (196), Expect(2) = 2e-59
Identities = 39/61 (63%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +1

Query: 169 EARVQMRSSKKSAPSGSIWYGADRPLYLGPFS-GSPPSYLTGEFPGDYGWDTAGLSADPE 345
E Q+ K + WYG DR L+LGPFS GS PSYLTGEFPGDYGWDT GLSADP
Sbjct: 97 EIAQQVTCQKIGGAACQEWYGPDRALWLGPFSEGSVPSYLTGEFPGDYGWDTQGLSADPN 156

Query: 346 T 348
T
Sbjct: 157 T 157


>tr|Q9LE96|Q9LE96_BIGNA Light-harvesting complex protein LHCG12
(Chloroplast light-harvesting complex II protein Lhcbm7)
OS=Bigelowiella natans PE=2 SV=1
Length = 346

Score = 173 bits (439), Expect(2) = 3e-59
Identities = 89/110 (80%), Positives = 91/110 (82%), Gaps = 1/110 (0%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529
A RE EVIHARWAMLGALGCVTPELLAK +GV E VWFKAGSQIFA+GGLDYLGNPS
Sbjct: 172 AAYRETEVIHARWAMLGALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPS 231

Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
LVHAQSILAI ACQVILMG E YRV GGP GE D I PGG FDPLGLA
Sbjct: 232 LVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLA 281



Score = 79.7 bits (195), Expect(2) = 3e-59
Identities = 36/43 (83%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
Frame = +1

Query: 223 WYGADRPLYLGPFS-GSPPSYLTGEFPGDYGWDTAGLSADPET 348
WYG DR L+LGPFS GS PSYLTGEFPGDYGWDT GLSADP T
Sbjct: 128 WYGPDRALWLGPFSEGSVPSYLTGEFPGDYGWDTQGLSADPNT 170


>tr|Q9LE98|Q9LE98_BIGNA Light-harvesting complex protein LHCG4
(Chloroplast light-harvesting complex II protein Lhcbm2)
OS=Bigelowiella natans PE=2 SV=1
Length = 345

Score = 172 bits (435), Expect(2) = 2e-58
Identities = 88/110 (80%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529
A RE EVIHARWAMLG LGCVTPELLAK +GV E VWFKAGSQIFA+GGLDYLGNPS
Sbjct: 171 AAYRETEVIHARWAMLGTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPS 230

Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
LVHAQSILAI ACQVILMG E YRV GGP GE D I PGG FDPLGLA
Sbjct: 231 LVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLA 280



Score = 78.6 bits (192), Expect(2) = 2e-58
Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +1

Query: 169 EARVQMRSSKKSAPSGSIWYGADRPLYLGPFS-GSPPSYLTGEFPGDYGWDTAGLSADPE 345
E Q+ K + WYG DR L+LGPFS G+ PSYLTGEFPGDYGWDT GLSADP
Sbjct: 109 EIAQQVTCQKIGGAACQEWYGPDRALWLGPFSEGAVPSYLTGEFPGDYGWDTQGLSADPT 168

Query: 346 T 348
T
Sbjct: 169 T 169


>tr|Q7XYQ7|Q7XYQ7_BIGNA Chlorophyll a/b-binding protein II 1
OS=Bigelowiella natans PE=2 SV=1
Length = 346

Score = 172 bits (435), Expect(2) = 2e-58
Identities = 88/110 (80%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Frame = +2

Query: 353 AKNRELEVIHARWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFADGGLDYLGNPS 529
A RE EVIHARWAMLG LGCVTPELLAK +GV E VWFKAGSQIFA+GGLDYLGNPS
Sbjct: 172 AAYRETEVIHARWAMLGTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPS 231

Query: 530 LVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGLA 679
LVHAQSILAI ACQVILMG E YRV GGP GE D I PGG FDPLGLA
Sbjct: 232 LVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLA 281



Score = 78.6 bits (192), Expect(2) = 2e-58
Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +1

Query: 169 EARVQMRSSKKSAPSGSIWYGADRPLYLGPFS-GSPPSYLTGEFPGDYGWDTAGLSADPE 345
E Q+ K + WYG DR L+LGPFS G+ PSYLTGEFPGDYGWDT GLSADP
Sbjct: 110 EIAQQVTCQKIGGAACQEWYGPDRALWLGPFSEGAVPSYLTGEFPGDYGWDTQGLSADPT 169

Query: 346 T 348
T
Sbjct: 170 T 170