DK961310
Clone id TST39A01NGRL0009_M07
Library
Length 669
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_M07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTGGCAGAAGCGGCATCTACAGACGTCGAGAGGGCAAGGCCAGCTAATGGTGGAGGTTGA
ATGGAAGATACCTTCGTTGACACAGGTGCACTAGAAGAGCCCTCTTATCTTCAGCTTCAA
CTTCATCGCCACTACCTCGACCACTACTATCACCCGGCCTTTCTAAGGGCATTTCCATGG
CTACTCACAGTCTTGTCAGCCAACCTGCTGCATTACAGCTCCCTCTTGCAAGCACGAGCG
CATGCGCGAAGGTTGGCGATGGACTCACCCCCACCGCTCTCTTTCACCCTCATGAACTCC
CCTTCCATGCGCTTGGTACGCTACAAAATCAAGCTCCTCAGGTACTCTGCAACCCTGATC
TTCTTTCTTCTGTTTTGGTCTTTCATACCCGAGATTGCGGTCCCCTTGGAAATGGGTTGG
GGCACCATTGAAGCCTCCATTGTGGGCCTCCTTGCCGGCTTCATCACCATCTACTTGAAC
GAGAACATGGCCCTTAATATGAGAAATCCATGGAAACCCGCCATCGATTTTCAGTTGGCA
AGCTATGGTTGCATGTGGGATATGTTGAGGCTTTTCGGTGCAACCCTGTTGGTCCCCTTT
GAAGAGGAGCTGTTCTACCATTCTTGGCTATACAGATACTTGTGCCAGCTTGTGAGCAGA
GAGCGGCAC
■■Homology search results ■■ -
sp_hit_id Q00203
Definition sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101 OS=Aspergillus niger
Align length 62
Score (bit) 33.5
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961310|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_M07, 5'
(652 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM10... 33 1.0
sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo sa... 28 1.5
sp|A4XI01|MRAY_CALS8 Phospho-N-acetylmuramoyl-pentapeptide-trans... 33 1.7
sp|Q80SU6|NPT2C_MOUSE Sodium-dependent phosphate transport prote... 32 2.2
sp|Q8BZ97|PRDM8_MOUSE PR domain zinc finger protein 8 OS=Mus mus... 32 3.8
sp|Q0DK16|NIP13_ORYSJ Aquaporin NIP1-3 OS=Oryza sativa subsp. ja... 32 3.8
sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo sa... 27 5.2
sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo sa... 27 5.4
sp|Q5ZL54|K0907_CHICK UPF0469 protein KIAA0907 homolog OS=Gallus... 31 6.5
sp|Q9Y3E5|PTH2_HUMAN Peptidyl-tRNA hydrolase 2, mitochondrial OS... 30 8.4
sp|Q9RT91|GUAA_DEIRA GMP synthase [glutamine-hydrolyzing] OS=Dei... 30 8.5
sp|P43268|ETV4_HUMAN ETS translocation variant 4 OS=Homo sapiens... 30 8.5

>sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101
OS=Aspergillus niger GN=PACC PE=2 SV=1
Length = 667

Score = 33.5 bits (75), Expect = 1.0
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -2

Query: 420 EASMVPQPISKGTAISGMKDQNRRKKIRVAEYLRSLIL*RTKRMEGEFMRVKESGGGESI 241
EA + T ++ D +K+R+ EYLR+ I R +R GEF ESGGG S
Sbjct: 552 EAEATLRTAQAATEVAERADVQWVEKVRLIEYLRNYIASRLER--GEFEN-NESGGGNSS 608

Query: 240 AN 235
+N
Sbjct: 609 SN 610


>sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo
sapiens GN=KRTAP10-7 PE=2 SV=2
Length = 375

Score = 28.5 bits (62), Expect(2) = 1.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3

Query: 177 CQPTCCITAPSC 212
C+PTCC+ PSC
Sbjct: 322 CRPTCCVPVPSC 333



Score = 23.1 bits (48), Expect(2) = 1.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3

Query: 174 SCQPTCCITA 203
SCQP CC T+
Sbjct: 297 SCQPACCTTS 306


>sp|A4XI01|MRAY_CALS8
Phospho-N-acetylmuramoyl-pentapeptide-transferase
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=mraY PE=3 SV=1
Length = 318

Score = 32.7 bits (73), Expect = 1.7
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = +2

Query: 317 LLRYSATLIFFLLFWSFIPEIAVPLEMGWGTIEASIVGLLAGFITIYLNENMALNMRNPW 496
L+ Y + LI LLF+ P+I PL ++G + F+ + L ++ L R
Sbjct: 57 LVIYLSILITSLLFYKKYPQIGAPLVC---ASAFGLIGFIDDFVKVVLKRSLGLRARE-- 111

Query: 497 KPAIDFQLASYGCMWDMLRLFGATLLVPFEEELFYHSWLY 616
K + F L S ++ + + G + +P SW Y
Sbjct: 112 KLVLQF-LISITFLYIVKKYLGTDVYIPILNRYVDLSWAY 150


>sp|Q80SU6|NPT2C_MOUSE Sodium-dependent phosphate transport protein
2C OS=Mus musculus GN=Slc34a3 PE=1 SV=1
Length = 601

Score = 32.3 bits (72), Expect = 2.2
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2

Query: 338 LIFFLLFWSFIPEIAVPLEMGWGTIEASIVGLLAGFITIYLNENMALNMRNPWKP 502
+++ LL + +P A L + GT+ A++ G L G + + + N+ R W P
Sbjct: 491 IVYLLLTFLLLPLAAFGLSLAGGTVLAAVGGPLVGLVLLIILVNVLQQHRPSWLP 545


>sp|Q8BZ97|PRDM8_MOUSE PR domain zinc finger protein 8 OS=Mus
musculus GN=Prdm8 PE=2 SV=1
Length = 687

Score = 31.6 bits (70), Expect = 3.8
Identities = 13/73 (17%), Positives = 33/73 (45%)
Frame = -1

Query: 541 PHATIACQLKIDGGFPWISHIKGHVLVQVDGDEAGKEAHNGGFNGAPTHFQGDRNLGYER 362
P+ + C + FP+++H++ ++ +A + GG G H G ++
Sbjct: 153 PYTCLECSQRFQFEFPYVAHLRFRCPKRLHSTDANPQDEQGGGLGTKDHGGGGGGKEQQQ 212

Query: 361 PKQKKEDQGCRVP 323
+Q+++ + +P
Sbjct: 213 QQQQQQQEAPLIP 225


>sp|Q0DK16|NIP13_ORYSJ Aquaporin NIP1-3 OS=Oryza sativa subsp.
japonica GN=NIP1-3 PE=3 SV=2
Length = 286

Score = 31.6 bits (70), Expect = 3.8
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -1

Query: 505 GGFPWISHIKGHVLVQVDGDEAGKEAHNGGFNGAPTHFQGDRNLG 371
G FPW + + QV G A A F GAP HF G G
Sbjct: 124 GRFPW-RRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAG 167


>sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo
sapiens GN=KRTAP10-4 PE=2 SV=1
Length = 401

Score = 26.6 bits (57), Expect(2) = 5.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3

Query: 177 CQPTCCITAPSC 212
C+P CC+ PSC
Sbjct: 369 CRPACCVPVPSC 380



Score = 23.1 bits (48), Expect(2) = 5.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3

Query: 174 SCQPTCCITA 203
SCQP CC T+
Sbjct: 344 SCQPACCTTS 353


>sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo
sapiens GN=KRTAP10-8 PE=2 SV=2
Length = 259

Score = 26.6 bits (57), Expect(2) = 5.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3

Query: 177 CQPTCCITAPSC 212
C+P CC+ PSC
Sbjct: 217 CRPACCVPVPSC 228



Score = 23.1 bits (48), Expect(2) = 5.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3

Query: 174 SCQPTCCITA 203
SCQP CC T+
Sbjct: 192 SCQPACCTTS 201


>sp|Q5ZL54|K0907_CHICK UPF0469 protein KIAA0907 homolog OS=Gallus
gallus GN=RCJMB04_7l9 PE=2 SV=1
Length = 619

Score = 30.8 bits (68), Expect = 6.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1

Query: 478 KGHVLVQVDGDEAGKEAHNGGFNGAPTHFQGDRNLGYERPKQKK 347
KG LV GD + +E +GG A T QG +LGY+ P ++
Sbjct: 565 KGFGLVAYAGDSSDEEEEHGGHKNASTFSQG-WSLGYQYPSSQQ 607


>sp|Q9Y3E5|PTH2_HUMAN Peptidyl-tRNA hydrolase 2, mitochondrial
OS=Homo sapiens GN=PTRH2 PE=1 SV=1
Length = 179

Score = 30.4 bits (67), Expect = 8.4
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3

Query: 504 PSIFSWQAMVACGIC*GFSVQPCWSPLKRSCSTILGYTDT--CASL*AESG 650
PS VACG+C G+S++ C+ L +S T +TDT AS+ +SG
Sbjct: 14 PSTLGLAVGVACGMCLGWSLRVCFGMLPKS-KTSKTHTDTESEASILGDSG 63


tr_hit_id A9TS26
Definition tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 198
Score (bit) 155.0
E-value 2.0e-36
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961310|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_M07, 5'
(652 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella paten... 155 2e-36
tr|B2EV50|B2EV50_9BACT CAAX prenyl protease-related protein OS=b... 49 2e-04
tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5 OS... 39 0.28
tr|B5EA75|B5EA75_GEOBB CAAX prenyl protease-related protein OS=G... 38 0.62
tr|A5G429|A5G429_GEOUR Abortive infection protein OS=Geobacter u... 36 2.3
tr|A1VI31|A1VI31_DESVV Abortive infection protein OS=Desulfovibr... 36 2.3
tr|Q314M1|Q314M1_DESDG CAAX amino terminal protease family prote... 35 3.1
tr|B7DDD1|B7DDD1_DESSA Phosphate ABC transporter, inner membrane... 35 3.1
tr|Q1K3X4|Q1K3X4_DESAC Abortive infection protein OS=Desulfuromo... 35 4.0
tr|A3U1Z9|A3U1Z9_9RHOB CAAX amino terminal protease family prote... 35 4.0
tr|A7RY52|A7RY52_NEMVE Predicted protein OS=Nematostella vectens... 35 5.2
tr|Q74BQ0|Q74BQ0_GEOSL CAAX amino terminal protease family prote... 35 5.2
tr|A3SQB3|A3SQB3_9RHOB CAAX amino terminal protease family prote... 35 5.2
tr|B6MMA8|B6MMA8_BRAFL Putative uncharacterized protein OS=Branc... 35 5.2
tr|Q01PN3|Q01PN3_SOLUE Abortive infection protein OS=Solibacter ... 34 6.8
tr|B2ARF5|B2ARF5_PODAN Predicted CDS Pa_4_7670 OS=Podospora anse... 34 6.8

>tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_171612 PE=4 SV=1
Length = 284

Score = 155 bits (393), Expect = 2e-36
Identities = 82/198 (41%), Positives = 111/198 (56%), Gaps = 29/198 (14%)
Frame = +2

Query: 146 LRAFPWLLTVLSANLLHY-----------------------------SSXXXXXXXXXXX 238
LR PW+LT++ ANLLHY SS
Sbjct: 9 LRITPWILTIICANLLHYRSLLDARNENRERVLAQRVTSKQQAKREASSKDAFEFMRKQA 68

Query: 239 XMDSPPPLSFTLMNSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPLEMGWGTIEA 418
L+F LM SP MR RYKIKLLRY+AT ++ L F+ FIPE+ + + ++E
Sbjct: 69 TTSKHELLTFDLMRSPIMRKARYKIKLLRYAATSVYILFFYRFIPELNEAYPVNFFSLEC 128

Query: 419 SIVGLLAGFITIYLNENMALNMRNPWKPAIDFQLASYGCMWDMLRLFGATLLVPFEEELF 598
IVG+L+G IT+YLNEN MR W+PA+DF G +WD++RL GA+L VP EEELF
Sbjct: 129 LIVGILSGLITVYLNENQDEAMRTLWRPAVDFGSGFLGDIWDVIRLVGASLAVPVEEELF 188

Query: 599 YHSWLYRYLCQLVSRERH 652
YHSW+YRY+ +L+ ++ +
Sbjct: 189 YHSWMYRYILKLLHKDEY 206


>tr|B2EV50|B2EV50_9BACT CAAX prenyl protease-related protein
OS=bacterium Ellin514 GN=CflavDRAFT_6127 PE=4 SV=1
Length = 209

Score = 49.3 bits (116), Expect = 2e-04
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Frame = +2

Query: 254 PPLSFTLMNSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPLEMGWG-TIEASIVG 430
P L F L+ + R + ++ T++ L W P + EM W + EA +VG
Sbjct: 6 PFLVFVLLTACQDRFGEASRYWIYFAKTIVGAWLVWMTWPIVK---EMRWAFSWEAVVVG 62

Query: 431 LLAGFITIYLNENMAL--NMRNPWKPAIDFQLASYGCMWDML--RLFGATLLVPFEEELF 598
+ I + L+ PW P + F S G W + R+ G+TL+VP EE+F
Sbjct: 63 VAVFAIWVGLDPYYPKLGKAGAPWNPNVSFVQGS-GLAWFFILTRIIGSTLVVPPIEEVF 121

Query: 599 YHSWLYRYL 625
Y S+LYRY+
Sbjct: 122 YRSFLYRYI 130


>tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5
OS=Hutchinsoniella macracantha GN=nad5 PE=3 SV=1
Length = 578

Score = 38.9 bits (89), Expect = 0.28
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +2

Query: 257 PLSFTLM-NSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPE---IAVPLEMGWGTIEASI 424
PLS T N +++ I LL AT + LL W P I +PL M T+ I
Sbjct: 408 PLSLTCSPNDKKNKMMTSPILLLTIMATTVGSLLTWFIFPNPEMICLPLPMKTATLFTII 467

Query: 425 VGLLAGFITIYLNENMALNMRNPWKPAIDFQLASYGCMWDMLRLFGATLLV 577
+G+L G I +N+ +N+ + D MW +++ +T+ +
Sbjct: 468 LGMLLGLILSNINQKSNMNLYKKFNKYKDLS----NTMW-FMKIISSTITI 513


>tr|B5EA75|B5EA75_GEOBB CAAX prenyl protease-related protein
OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
DSM 16622) GN=Gbem_1765 PE=4 SV=1
Length = 237

Score = 37.7 bits (86), Expect = 0.62
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2

Query: 401 WGTIEASIVGLLAGFITIYLNENMALNMRNPWKPAIDFQLAS--YGCMWDMLRLFGATLL 574
W T+ +++GLL I+++ + + + +P L + R+ GA L+
Sbjct: 84 WRTVSVALIGLLT--FAIWVSADWVVTLASPLSGFNPMLLPDEVVRVLMTAFRVVGAVLV 141

Query: 575 VPFEEELFYHSWLYRYL 625
VP EE+F+ S+L RYL
Sbjct: 142 VPIMEEVFWRSFLLRYL 158


>tr|A5G429|A5G429_GEOUR Abortive infection protein OS=Geobacter
uraniireducens (strain Rf4) GN=Gura_2368 PE=4 SV=1
Length = 237

Score = 35.8 bits (81), Expect = 2.3
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +2

Query: 419 SIVGLLAGFITIYLNENMALNM-----RNPWKPAIDFQLASYGCMWDMLRLFGATLLVPF 583
S++ +++G + L NM N + + P+I Q +R+ GA ++VP
Sbjct: 86 SVISIISGIVVFILWINMDWNFTSHPSQQGFNPSI-LQDDRMRTSMTFVRMTGAVIIVPI 144

Query: 584 EEELFYHSWLYRYL 625
EELF+ S+L RY+
Sbjct: 145 MEELFWRSFLIRYI 158


>tr|A1VI31|A1VI31_DESVV Abortive infection protein OS=Desulfovibrio
vulgaris subsp. vulgaris (strain DP4) GN=Dvul_3086 PE=4
SV=1
Length = 274

Score = 35.8 bits (81), Expect = 2.3
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2

Query: 548 LRLFGATLLVPFEEELFYHSWLYRYL 625
+R GATLLVP EELF+ S+L R+L
Sbjct: 170 IRFIGATLLVPLAEELFWRSFLLRHL 195


>tr|Q314M1|Q314M1_DESDG CAAX amino terminal protease family protein
OS=Desulfovibrio desulfuricans (strain G20) GN=Dde_0824
PE=4 SV=1
Length = 242

Score = 35.4 bits (80), Expect = 3.1
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2

Query: 548 LRLFGATLLVPFEEELFYHSWLYRYL 625
+RL GATL+VP EELF+ S+L RY+
Sbjct: 138 VRLAGATLVVPVMEELFWRSFLIRYI 163


>tr|B7DDD1|B7DDD1_DESSA Phosphate ABC transporter, inner membrane
subunit PstC OS=Desulfovibrio salexigens DSM 2638
GN=DesalDRAFT_0921 PE=3 SV=1
Length = 450

Score = 35.4 bits (80), Expect = 3.1
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2

Query: 386 PLEMGWGTIE--ASIVGLLAGFIT-IYLNENMALNMRNPWKPAIDFQLASYGCMWDMLRL 556
PL +G GT+ +S++ + G +T IYL E L +RN KPA++ A ++
Sbjct: 222 PLIVGSGTVTMLSSLIAIPLGVMTAIYLAEIAPLKVRNIVKPAVEMLAALPSV---VIGF 278

Query: 557 FGATLLVPFEEELF 598
FG ++ PF +E F
Sbjct: 279 FGMVVVAPFLQETF 292


>tr|Q1K3X4|Q1K3X4_DESAC Abortive infection protein OS=Desulfuromonas
acetoxidans DSM 684 GN=Dace_3195 PE=4 SV=1
Length = 241

Score = 35.0 bits (79), Expect = 4.0
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2

Query: 536 MWDMLRLFGATLLVPFEEELFYHSWLYRY 622
M + RLFGA L+VP EE+F+ S+L RY
Sbjct: 133 MMVIARLFGAVLVVPVMEEIFWRSFLIRY 161


>tr|A3U1Z9|A3U1Z9_9RHOB CAAX amino terminal protease family protein
OS=Oceanicola batsensis HTCC2597 GN=OB2597_00910 PE=4
SV=1
Length = 519

Score = 35.0 bits (79), Expect = 4.0
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Frame = +2

Query: 260 LSFTLMNSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPLEMGWGTIEASIVGLLA 439
L+ TL +P+M Y +++L +A ++ FL + P+ + G +++GL
Sbjct: 341 LASTLSQTPAMH---YPLRMLIVAAVVLPFLPVYRAFDWRLDPVALAGG----AVIGLYW 393

Query: 440 GFITIYLNENMALNMRNPWKPAIDFQLASYGCM-------WDMLRLFGATLLVPFEEELF 598
I P ++A YG + W +LR FG +LVP EELF
Sbjct: 394 VLI-----------------PVAPAEVAPYGTLTGGFLVLWFLLRGFGTIVLVPLVEELF 436

Query: 599 YHSWL 613
+ +L
Sbjct: 437 FRDYL 441