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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961331
Clone id TST39A01NGRL0009_N04
Library
Length 780
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_N04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCAATCTCCATAGCCGCTT
CCTCGGCAGTTGTCGCTCCGAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTG
GTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCTGTTCGCCATCTCTCATG
GCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTC
TGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATCGCGAAGCAGGTGGACTTCATGGGCC
GAAAAGGGTGGACCCCTTGCATAGAGTTCGAGAAAATCGGGAGCGTGTACGGAGAGCACT
TCCACGGCAGCTGTTACAACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTG
GCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTG
AAGCCTTCATCCGCGTGCTGGGCTTTGACGCTGAGAGGCAGGTGCAGGTCTCCGGCTTCC
TTGTCCAGAAGCCCTCTGTCTAAACTTTCTAAAAGCAAGCCAATTTAGTTGGCATGAATT
GCCTGCTTCCCATTTCCCCATGGGCGCCCAAACAAGGTTTGCTCTTATTGAGCTTTTTGT
GTCCCAACCCAATTTTGGCATACTTAAAGGAAAAAAAACTTTCCCCGGTGGGTGGCTTTC
CCCTGGCCTTTTTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 156
Score (bit) 174.0
E-value 4.0e-43
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961331|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_N04, 5'
         (739 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   174   4e-43
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   172   2e-42
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   169   2e-41
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   168   3e-41
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   168   3e-41
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   167   7e-41
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   166   9e-41
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   166   1e-40
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   166   2e-40
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   165   2e-40
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   165   3e-40
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   165   3e-40
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   164   4e-40
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   164   4e-40
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   164   4e-40
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   164   4e-40
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   164   4e-40
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   164   4e-40
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   164   5e-40
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   164   5e-40
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   164   6e-40
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   163   8e-40
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   163   8e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   163   8e-40
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   163   8e-40
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   163   1e-39
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   163   1e-39
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   162   2e-39
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   162   2e-39

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  174 bits (441), Expect = 4e-43
 Identities = 86/156 (55%), Positives = 107/156 (68%), Gaps = 5/156 (3%)
 Frame = +3

Query: 102 LSKSFSGLKATTLF--APKSPNLFAI--SHGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 269
           L+  F+GLK+   F    K+ N F+   S+G RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 270 QIAKQVDFMGRKGWTPCIEFE-KIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVL 446
            ++K++D++ R  W PC+EFE + G VY EH H   Y DGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 447 REIAECAKEYPEAFIRVLGFDAERQVQVSGFLVQKP 554
           +E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  172 bits (435), Expect = 2e-42
 Identities = 80/150 (53%), Positives = 100/150 (66%), Gaps = 3/150 (2%)
 Frame = +3

Query: 114 FSGLKATT---LFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 284
           F GLK+T    +    S +L  +S+G R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 285 VDFMGRKGWTPCIEFEKIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLREIAEC 464
           VD++ R GW PC+EF K+G VY E+    CY DGRYW MWKLPMFGC DA  V +E+ E 
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEA 136

Query: 465 AKEYPEAFIRVLGFDAERQVQVSGFLVQKP 554
            K YP+AF RV+GFD  +Q Q   F+  KP
Sbjct: 137 IKSYPDAFHRVIGFDNIKQTQCVSFIAYKP 166


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  169 bits (427), Expect = 2e-41
 Identities = 83/152 (54%), Positives = 108/152 (71%), Gaps = 4/152 (2%)
 Frame = +3

Query: 114 FSGLKATTLF--APKSPNLFAI-SHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 284
           F+GLK+++ F    KS ++ +I S+G RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 285 VDFMGRKGWTPCIEFE-KIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLREIAE 461
           VD++ RK W PC+EFE + G VY E+     Y DGRYW MWKLPMFGC D++ VL+E+ E
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149

Query: 462 CAKEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
             K YP++FIR++GFD  RQVQ   F+  KP+
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  168 bits (425), Expect = 3e-41
 Identities = 83/157 (52%), Positives = 111/157 (70%), Gaps = 4/157 (2%)
 Frame = +3

Query: 102 LSKSFSGLKATTLF--APKSPNLFAI-SHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 272
           L+  F+GLK++  F    K+ ++ +I S+GSRV+ M VW P   KKFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 273 IAKQVDFMGRKGWTPCIEFE-KIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLR 449
           + K+V+++ RKGW PC+EFE + G V+ ++     Y DGRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 450 EIAECAKEYPEAFIRVLGFDAERQVQVSGFLVQKPSV 560
           E+AEC  EYPEAFIR++GFD  RQVQ   F+   P V
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  168 bits (425), Expect = 3e-41
 Identities = 85/152 (55%), Positives = 105/152 (69%), Gaps = 5/152 (3%)
 Frame = +3

Query: 114 FSGLKATTLF--APKSPNLFA--ISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 281
           F+ LK+T+ F    K+ N      S+G RV  M VW P   KKFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 282 QVDFMGRKGWTPCIEFE-KIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLREIA 458
           +VD++ RK   PC+EFE + G VY EH     Y DGRYW MWKLPMFGC D++ VL+E+ 
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147

Query: 459 ECAKEYPEAFIRVLGFDAERQVQVSGFLVQKP 554
           EC K YP AFIR++GFD +RQVQ+  F+  KP
Sbjct: 148 ECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  167 bits (422), Expect = 7e-41
 Identities = 82/151 (54%), Positives = 105/151 (69%), Gaps = 4/151 (2%)
 Frame = +3

Query: 114 FSGLKATTLF-APKSPNLFAI--SHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 284
           F+GLK+   F   K  N F+   S+G RV  M VW P   KK+ETLSYLPPL+  Q+AK+
Sbjct: 25  FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 285 VDFMGRKGWTPCIEFE-KIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLREIAE 461
           VD++ RK W PC+EFE + G VY E+     Y DGRYW MWKLPMFGC D+A V++E+AE
Sbjct: 85  VDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAE 144

Query: 462 CAKEYPEAFIRVLGFDAERQVQVSGFLVQKP 554
           C KEYP+A+IR++GFD  RQVQ   F+  +P
Sbjct: 145 CKKEYPQAWIRIIGFDNVRQVQCIMFIASRP 175


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  166 bits (421), Expect = 9e-41
 Identities = 80/152 (52%), Positives = 101/152 (66%), Gaps = 4/152 (2%)
 Frame = +3

Query: 114 FSGLKATTLFAPKSPN---LFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 284
           F+GLK+T  F     N       S+G RV  M VW   + K++ETLSYLPPL+++Q+A+Q
Sbjct: 27  FTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQ 86

Query: 285 VDFMGRKGWTPCIEFEKI-GSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLREIAE 461
           VD++    W PC+EFE   G VY EH +   Y DGRYW MWKLPMFGC D A VL E+ E
Sbjct: 87  VDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEE 146

Query: 462 CAKEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           C KEYP AFIR++GFD+ RQVQ   F+  KP+
Sbjct: 147 CKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPA 178


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  166 bits (420), Expect = 1e-40
 Identities = 82/157 (52%), Positives = 104/157 (66%), Gaps = 9/157 (5%)
 Frame = +3

Query: 111 SFSGLKATTLFAPKSPNLF---------AISHGSRVSAMLVWKPYDNKKFETLSYLPPLS 263
           +F+GLK+   F P S  +            S+GSRV  M VW PY NKKFETLSYLP L+
Sbjct: 31  AFTGLKSMAQF-PSSKTMSNAGAEWEQKTTSNGSRVRCMQVWPPYANKKFETLSYLPRLT 89

Query: 264 SEQIAKQVDFMGRKGWTPCIEFEKIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAV 443
            EQ+ K+V+++ +  W PC+EFE+ G +   + +   Y DGRYWVMWKLPMFGC +A+ V
Sbjct: 90  PEQLVKEVEYLLKNKWVPCLEFEEDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQV 149

Query: 444 LREIAECAKEYPEAFIRVLGFDAERQVQVSGFLVQKP 554
           L E+ ECAK YP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 150 LNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  166 bits (419), Expect = 2e-40
 Identities = 81/152 (53%), Positives = 103/152 (67%), Gaps = 5/152 (3%)
 Frame = +3

Query: 114 FSGLKATTLF-APKSPN---LFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 281
           F+GLK++  F A +  N       S+G RV+ M VW P   KKFETLSYLP L+  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 282 QVDFMGRKGWTPCIEFE-KIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLREIA 458
           +VD++ R  W PC+EFE + G VY EH +   Y DGRYW MWKLP+FGC D+A VL+E+ 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 459 ECAKEYPEAFIRVLGFDAERQVQVSGFLVQKP 554
           EC KEYP AFIR++GFD  RQVQ   F+  KP
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  165 bits (418), Expect = 2e-40
 Identities = 81/156 (51%), Positives = 104/156 (66%), Gaps = 8/156 (5%)
 Frame = +3

Query: 111 SFSGLKATTLFAP--KSPNLFA------ISHGSRVSAMLVWKPYDNKKFETLSYLPPLSS 266
           +F+GLK+T  F    K  N  A       S+G RV  M VW P+ N KFETLSYLP L+ 
Sbjct: 15  AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74

Query: 267 EQIAKQVDFMGRKGWTPCIEFEKIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVL 446
           EQ+ K+V+++ R  W PC+EF+  GS+  ++     Y DGRYWVMWKLPMFGC +A+ V+
Sbjct: 75  EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVI 134

Query: 447 REIAECAKEYPEAFIRVLGFDAERQVQVSGFLVQKP 554
            E+ ECAK YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 135 NEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 152
Score (bit) 266.0
E-value 1.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961331|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_N04, 5'
         (739 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   266   1e-69
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   189   2e-46
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   186   1e-45
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   186   2e-45
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   185   2e-45
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   185   2e-45
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   182   2e-44
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   177   6e-43
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   177   6e-43
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   176   1e-42
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   174   4e-42
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   174   4e-42
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   174   5e-42
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   173   9e-42
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   173   9e-42
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   172   2e-41
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   172   3e-41
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   171   4e-41
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   171   4e-41
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   170   8e-41
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car...   170   1e-40
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   169   1e-40
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   169   1e-40
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   169   2e-40
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c...   168   4e-40
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   167   5e-40
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   167   7e-40
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   167   9e-40
tr|O24574|O24574_MAIZE Ribulose bisphosphate carboxylase small c...   167   9e-40

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  266 bits (680), Expect = 1e-69
 Identities = 125/152 (82%), Positives = 139/152 (91%)
 Frame = +3

Query: 102 LSKSFSGLKATTLFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 281
           LSKSFSGLKA TLFAPK  N  AIS+GSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 282 QVDFMGRKGWTPCIEFEKIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLREIAE 461
           QV++M RKGWTPCIEF+ IGSVY EHFHGS Y DGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 462 CAKEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           CAKEYP AFIRVLGFDA+RQVQV+GFLV+KPS
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  189 bits (480), Expect = 2e-46
 Identities = 90/153 (58%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K FSGLK+TTLFA K+  L ++ +GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 288 DFMGRKGWTPCIEFEKIGSVYGEHFHG---SCYNDGRYWVMWKLPMFGCQDAAAVLREIA 458
           DFM ++   PCIEF+ +GSV   +F G   S Y DGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 459 ECAKEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           EC + +P  ++RVLGFD+++QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  186 bits (472), Expect = 1e-45
 Identities = 89/153 (58%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K FSGLK+TTL A K+  L ++ +GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 288 DFMGRKGWTPCIEFEKIGSVYGEHFHG---SCYNDGRYWVMWKLPMFGCQDAAAVLREIA 458
           DFM ++   PCIEF+ +GSV   +F G   S Y DGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 459 ECAKEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           EC + +P  ++RVLGFD+++QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/153 (56%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K+FSGLK  TLF+ K+  L A+ +GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 288 DFMGRKGWTPCIEFEKIGSVYGEHFHG---SCYNDGRYWVMWKLPMFGCQDAAAVLREIA 458
           D+M ++   PCIEF+ +GSV   +F G   S Y DGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 459 ECAKEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           EC  ++P  ++RVLGFD+++QVQ+ GFLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  185 bits (470), Expect = 2e-45
 Identities = 86/153 (56%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K+FSGLK+ TLF+ K+  L ++ +GSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 288 DFMGRKGWTPCIEFEKIGSVYGEHFHG---SCYNDGRYWVMWKLPMFGCQDAAAVLREIA 458
           D+M ++   PCIEF+ +GSV   +F G   S Y DGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 459 ECAKEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           EC  ++P  ++RVLGFD+++QVQ+ GFLV +P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  185 bits (470), Expect = 2e-45
 Identities = 87/153 (56%), Positives = 111/153 (72%), Gaps = 3/153 (1%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K+FSGLK+ TLF  KS  L ++ +GSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 288 DFMGRKGWTPCIEFEKIGSVYGEHFHG---SCYNDGRYWVMWKLPMFGCQDAAAVLREIA 458
           D+M ++   PCIEF+ +G+V   +F G   S Y DGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 459 ECAKEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           EC   YP  ++RVLGFD+++QVQ+ GFLV +P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  182 bits (463), Expect = 2e-44
 Identities = 84/153 (54%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K+FSGLK+ TLF+ ++  L ++ +GSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 288 DFMGRKGWTPCIEFEKIGSVYGEHFHG---SCYNDGRYWVMWKLPMFGCQDAAAVLREIA 458
           D+M ++   PCIEF+ +GSV   +F G   S Y DGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 459 ECAKEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           EC  ++P  ++RVLGFD+++QVQ+ GFLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  177 bits (449), Expect = 6e-43
 Identities = 84/150 (56%), Positives = 106/150 (70%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K+FSGLK++TLF+ K+ +L ++ +GSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 288 DFMGRKGWTPCIEFEKIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLREIAECA 467
           D+M ++   PC+EF+    V   +     Y DGRYW MWKLPMFGCQD A VLREI EC 
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151

Query: 468 KEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  177 bits (449), Expect = 6e-43
 Identities = 84/150 (56%), Positives = 107/150 (71%)
 Frame = +3

Query: 108 KSFSGLKATTLFAPKSPNLFAISHGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 287
           K+FSGLK+ TLF+ +S  L ++ +GSRV+ M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 288 DFMGRKGWTPCIEFEKIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVLREIAECA 467
           ++M ++   PC+EF+    V  E+     Y DGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 468 KEYPEAFIRVLGFDAERQVQVSGFLVQKPS 557
           K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/156 (55%), Positives = 108/156 (69%), Gaps = 5/156 (3%)
 Frame = +3

Query: 102 LSKSFSGLKATTLF--APKSPNLFAI--SHGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 269
           L+  F+GLK+   F    K+ N F+   S+G RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 270 QIAKQVDFMGRKGWTPCIEFE-KIGSVYGEHFHGSCYNDGRYWVMWKLPMFGCQDAAAVL 446
            ++K++D++ R  W PC+EFE + G VY EH H   Y DGRYW MWKLPMFGC D+A V+
Sbjct: 82  ALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141

Query: 447 REIAECAKEYPEAFIRVLGFDAERQVQVSGFLVQKP 554
           +E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177