DK961333 |
Clone id |
TST39A01NGRL0009_N06 |
Library |
TST39 |
Length |
794 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_N06. 5' end sequence. |
Accession |
DK961333 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1052Contig1 |
Sequence |
GTGGAAGTGGGCGACGGAGGAGAAGGTGAAGAAGAGGAAGCATGGAGAGCAGCGAAGCTG TTCATGGCCAAGGGGCCGTCGGCGACGCTCCAGTTTCTCAAGGACGAACCGAAGGCCCTG CTATATGCTCTGGACGCGCAGGCCATGGAGGGTCCCTTCCTTTCGCACGAGATTGCTGCG CAGGCCCCTGCCCTGCTGGATCCTGCCCTCGTCCGCAAGCAGGAGGCCTGGAAAGCTTTG GGCTCCATGAGCAAGACACAGGCGAAGCGTGCCTTTGTGCAGCTTCTCTCGTTCCTGCTC CCTCATTGGAAAGATTGGCACCCCCCACTCATTGAAACCCACAAGGATGAAGCTTCACGT ATCTTGTCTGCATTCATGAAGAAGACAGGCCTTAAGCTCCGCTCTTCTCTTTGATCGCTG CAGCAGCTCGGCTCTCTTTGGTTGACACAATTTGCAGGTTTTGTGTCCACTGGTTTTTCC TTTTGGTATAGTCTTGCCTGCTCCTTTGCCTACTCTAATGTTCTTTGGCATCTGAATATC AATGGCACATGTGTAATCGTGCCCTGTACATGAGATACAGGAAGAGATGTCTGTGCATAT GGTCCAACCTGACATCTATACAAGATGTATGTGCAGATGATATCTGTATCGGGAGGCAGA TTGAATTGTATAGTTTAAATTGTGTCATAAATTTGATTACTTATCTTGCGATGTCTTCCA TTTATGTTGTAAAAAATGGTTGGCCCTATTAATCCTTTTGGGTTTTTTAAAAAAAAAAAA AAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O75521 |
Definition |
sp|O75521|PECI_HUMAN Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Homo sapiens |
Align length |
67 |
Score (bit) |
37.4 |
E-value |
0.093 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NTM9 |
Definition |
tr|A9NTM9|A9NTM9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
116 |
Score (bit) |
99.0 |
E-value |
3.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961333|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_N06, 5' (768 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NTM9|A9NTM9_PICSI Putative uncharacterized protein OS=Picea... 99 3e-19 tr|A9SNQ3|A9SNQ3_PHYPA Predicted protein OS=Physcomitrella paten... 87 2e-15 tr|B4R3Q9|B4R3Q9_DROSI GD15501 OS=Drosophila simulans GN=GD15501... 45 0.005 tr|B4I6G2|B4I6G2_DROSE GM22630 OS=Drosophila sechellia GN=GM2263... 45 0.005 tr|Q8IK25|Q8IK25_PLAF7 Acyl CoA binding protein, putative OS=Pla... 40 0.13 tr|Q4QQP5|Q4QQP5_XENLA MGC132021 protein (Fragment) OS=Xenopus l... 39 0.30 tr|Q3KPR0|Q3KPR0_XENLA MGC132021 protein OS=Xenopus laevis GN=MG... 39 0.30 tr|B5DEU3|B5DEU3_XENTR Putative uncharacterized protein OS=Xenop... 39 0.30 tr|Q9VRG6|Q9VRG6_DROME CG33713, isoform A OS=Drosophila melanoga... 39 0.30 tr|Q4UG27|Q4UG27_THEAN Acyl-coa-binding protein, putative OS=The... 39 0.39 tr|Q3ZC57|Q3ZC57_BOVIN Peroxisomal D3,D2-enoyl-CoA isomerase OS=... 38 0.66 tr|B3NYC8|B3NYC8_DROER GG17546 OS=Drosophila erecta GN=GG17546 P... 38 0.66 tr|A7SZV6|A7SZV6_NEMVE Predicted protein OS=Nematostella vectens... 38 0.66 tr|Q6CYA7|Q6CYA7_KLULA KLLA0A01870p OS=Kluyveromyces lactis GN=K... 38 0.66 tr|Q29I62|Q29I62_DROPS GA17261 OS=Drosophila pseudoobscura pseud... 38 0.87 tr|B4PZ24|B4PZ24_DROYA GE15306 OS=Drosophila yakuba GN=GE15306 P... 38 0.87 tr|A7SKC0|A7SKC0_NEMVE Predicted protein OS=Nematostella vectens... 38 0.87 tr|A7AV23|A7AV23_BABBO Acyl CoA binding protein OS=Babesia bovis... 38 0.87 tr|Q4N9P7|Q4N9P7_THEPA Acyl CoA binding protein, putative OS=The... 37 1.1 tr|Q9NYD2|Q9NYD2_HUMAN Hepatocellular carcinoma-associated antig... 37 1.1 tr|Q7L124|Q7L124_HUMAN PECI protein OS=Homo sapiens GN=PECI PE=2... 37 1.1 tr|Q6IBN4|Q6IBN4_HUMAN PECI protein OS=Homo sapiens GN=PECI PE=2... 37 1.1 tr|Q59E94|Q59E94_HUMAN Peroxisomal D3,D2-enoyl-CoA isomerase iso... 37 1.1 tr|Q53HG3|Q53HG3_HUMAN Peroxisomal D3,D2-enoyl-CoA isomerase iso... 37 1.1 tr|Q53GC8|Q53GC8_HUMAN Peroxisomal D3,D2-enoyl-CoA isomerase iso... 37 1.1 tr|B4DLL3|B4DLL3_HUMAN cDNA FLJ56683, highly similar to Peroxiso... 37 1.1 tr|Q6BY30|Q6BY30_DEBHA DEHA2A12892p OS=Debaryomyces hansenii GN=... 37 1.1 tr|A8I9X5|A8I9X5_CHLRE Predicted protein OS=Chlamydomonas reinha... 37 1.5 tr|B4N1I0|B4N1I0_DROWI GK16311 OS=Drosophila willistoni GN=GK163... 37 1.5 tr|Q7RP05|Q7RP05_PLAYO Acyl CoA binding protein, putative OS=Pla... 37 1.9
>tr|A9NTM9|A9NTM9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 163
Score = 99.0 bits (245), Expect = 3e-19 Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 5/116 (4%) Frame = +1
Query: 43 WRAAKLFMAKGPSATLQFLKDEPKALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQ 222 W A LF+AKGPSATLQFL ++ KALLYA AQA++GP S + KQ Sbjct: 41 WGTAMLFLAKGPSATLQFLPEKSKALLYAYKAQALDGPCPSGQDGSLAIDHALRV---KQ 97
Query: 223 EAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLI-----ETHKDEASRILSAF 375 EAWKALG M + QAKR F+ LL+ +LP WK+W+ E + DE+++IL F Sbjct: 98 EAWKALGDMPRAQAKREFIDLLTEVLPEWKNWYNSYAAKVQKEENVDESAKILREF 153
>tr|A9SNQ3|A9SNQ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165853 PE=4 SV=1 Length = 140
Score = 86.7 bits (213), Expect = 2e-15 Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 6/117 (5%) Frame = +1
Query: 43 WRAAKLFMAKGPSATLQFLKDEPKALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQ 222 WRAA F+AKGPSATLQ+L+ + ++ L+AL AQA++G + +Q Sbjct: 10 WRAASYFLAKGPSATLQYLQKDVRSNLFALKAQALDGDCPPGQDGSMAMDPSLRI---RQ 66
Query: 223 EAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLI------ETHKDEASRILSAF 375 EAW AL MS+ QAKR FV LL+ +LP WK W E H+ EA +++ AF Sbjct: 67 EAWNALKGMSREQAKRNFVDLLTEVLPEWKKWSADYASKTNSGEEHESEADKLVKAF 123
>tr|B4R3Q9|B4R3Q9_DROSI GD15501 OS=Drosophila simulans GN=GD15501 PE=4 SV=1 Length = 243
Score = 45.1 bits (105), Expect = 0.005 Identities = 19/47 (40%), Positives = 31/47 (65%) Frame = +1
Query: 217 KQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIETHKDEAS 357 K +AW+ LG+MS++ A++A+VQ L L P+W+ W P H E++ Sbjct: 62 KWQAWRNLGTMSQSAARQAYVQKLQELQPNWRSWRNPGWVVHSIESA 108
>tr|B4I6G2|B4I6G2_DROSE GM22630 OS=Drosophila sechellia GN=GM22630 PE=4 SV=1 Length = 243
Score = 45.1 bits (105), Expect = 0.005 Identities = 19/47 (40%), Positives = 31/47 (65%) Frame = +1
Query: 217 KQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIETHKDEAS 357 K +AW+ LG+MS++ A++A+VQ L L P+W+ W P H E++ Sbjct: 62 KWQAWRNLGTMSQSAARQAYVQKLQELQPNWRSWRNPGWVVHSIESA 108
>tr|Q8IK25|Q8IK25_PLAF7 Acyl CoA binding protein, putative OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0015 PE=4 SV=1 Length = 90
Score = 40.4 bits (93), Expect = 0.13 Identities = 14/34 (41%), Positives = 27/34 (79%) Frame = +1
Query: 214 RKQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKD 315 +K EAWK++ ++++ AK+ +V+L+S L P+W+D Sbjct: 55 KKYEAWKSVENLNREDAKKRYVELVSALFPYWQD 88
>tr|Q4QQP5|Q4QQP5_XENLA MGC132021 protein (Fragment) OS=Xenopus laevis GN=MGC132021 PE=2 SV=1 Length = 349
Score = 39.3 bits (90), Expect = 0.30 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Frame = +1
Query: 82 ATLQFLKDEP----KALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSM 249 + L+ LK++P K LYAL QA +GP K +AW +LGS+ Sbjct: 4 SNLKLLKNDPGNEVKLKLYALFKQATQGP-----CNVSKPGMLDFVNKVKWDAWNSLGSL 58
Query: 250 SKTQAKRAFVQLLSFLL 300 SK A++++V+L+S L+ Sbjct: 59 SKDDARQSYVELVSSLV 75
>tr|Q3KPR0|Q3KPR0_XENLA MGC132021 protein OS=Xenopus laevis GN=MGC132021 PE=2 SV=1 Length = 358
Score = 39.3 bits (90), Expect = 0.30 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Frame = +1
Query: 82 ATLQFLKDEP----KALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSM 249 + L+ LK++P K LYAL QA +GP K +AW +LGS+ Sbjct: 13 SNLKLLKNDPGNEVKLKLYALFKQATQGP-----CNVSKPGMLDFVNKVKWDAWNSLGSL 67
Query: 250 SKTQAKRAFVQLLSFLL 300 SK A++++V+L+S L+ Sbjct: 68 SKDDARQSYVELVSSLV 84
>tr|B5DEU3|B5DEU3_XENTR Putative uncharacterized protein OS=Xenopus tropicalis PE=2 SV=1 Length = 358
Score = 39.3 bits (90), Expect = 0.30 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Frame = +1
Query: 82 ATLQFLKDEP----KALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSM 249 + L+ LK++P K LYAL QA +GP K +AWK+LGS+ Sbjct: 13 SNLKLLKNDPGNEVKLKLYALFKQATQGP-----CNVPKPGMLDFVNKVKWDAWKSLGSL 67
Query: 250 SKTQAKRAFVQLLSFLL 300 K A++++V+L+S L+ Sbjct: 68 PKDDARQSYVELVSSLV 84
>tr|Q9VRG6|Q9VRG6_DROME CG33713, isoform A OS=Drosophila melanogaster GN=CG1704 PE=2 SV=2 Length = 243
Score = 39.3 bits (90), Expect = 0.30 Identities = 18/46 (39%), Positives = 29/46 (63%) Frame = +1
Query: 217 KQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIETHKDEA 354 K +AW+ LG+MS++ A++A+VQ L L P+W+ P H E+ Sbjct: 62 KWQAWRNLGTMSQSAARQAYVQKLQELQPNWRSRRNPGWVVHSIES 107
>tr|Q4UG27|Q4UG27_THEAN Acyl-coa-binding protein, putative OS=Theileria annulata GN=TA19910 PE=4 SV=1 Length = 89
Score = 38.9 bits (89), Expect = 0.39 Identities = 24/70 (34%), Positives = 33/70 (47%) Frame = +1
Query: 103 DEPKALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSMSKTQAKRAFVQ 282 DE K L Y QA G + K E+W + MSK +AKR++V+ Sbjct: 23 DEQKLLFYKYFKQATVG-----DCNTSKPGFMDFKGKAKWESWNSAKGMSKEEAKRSYVE 77
Query: 283 LLSFLLPHWK 312 LL+ L P+WK Sbjct: 78 LLTKLEPNWK 87
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