DK961333
Clone id TST39A01NGRL0009_N06
Library
Length 794
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_N06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTGGAAGTGGGCGACGGAGGAGAAGGTGAAGAAGAGGAAGCATGGAGAGCAGCGAAGCTG
TTCATGGCCAAGGGGCCGTCGGCGACGCTCCAGTTTCTCAAGGACGAACCGAAGGCCCTG
CTATATGCTCTGGACGCGCAGGCCATGGAGGGTCCCTTCCTTTCGCACGAGATTGCTGCG
CAGGCCCCTGCCCTGCTGGATCCTGCCCTCGTCCGCAAGCAGGAGGCCTGGAAAGCTTTG
GGCTCCATGAGCAAGACACAGGCGAAGCGTGCCTTTGTGCAGCTTCTCTCGTTCCTGCTC
CCTCATTGGAAAGATTGGCACCCCCCACTCATTGAAACCCACAAGGATGAAGCTTCACGT
ATCTTGTCTGCATTCATGAAGAAGACAGGCCTTAAGCTCCGCTCTTCTCTTTGATCGCTG
CAGCAGCTCGGCTCTCTTTGGTTGACACAATTTGCAGGTTTTGTGTCCACTGGTTTTTCC
TTTTGGTATAGTCTTGCCTGCTCCTTTGCCTACTCTAATGTTCTTTGGCATCTGAATATC
AATGGCACATGTGTAATCGTGCCCTGTACATGAGATACAGGAAGAGATGTCTGTGCATAT
GGTCCAACCTGACATCTATACAAGATGTATGTGCAGATGATATCTGTATCGGGAGGCAGA
TTGAATTGTATAGTTTAAATTGTGTCATAAATTTGATTACTTATCTTGCGATGTCTTCCA
TTTATGTTGTAAAAAATGGTTGGCCCTATTAATCCTTTTGGGTTTTTTAAAAAAAAAAAA
AAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O75521
Definition sp|O75521|PECI_HUMAN Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Homo sapiens
Align length 67
Score (bit) 37.4
E-value 0.093
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961333|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_N06, 5'
(768 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O75521|PECI_HUMAN Peroxisomal 3,2-trans-enoyl-CoA isomerase O... 37 0.093
sp|Q66JD7|ACBD6_XENTR Acyl-CoA-binding domain-containing protein... 35 0.60
sp|A2VDR2|ACBD6_BOVIN Acyl-CoA-binding domain-containing protein... 35 0.60
sp|Q4V869|ACBD6_XENLA Acyl-CoA-binding domain-containing protein... 34 0.78
sp|Q9BR61|ACBD6_HUMAN Acyl-CoA-binding domain-containing protein... 34 0.78
sp|Q5RJK8|ACBD6_RAT Acyl-CoA-binding domain-containing protein 6... 33 1.7
sp|Q9D061|ACBD6_MOUSE Acyl-CoA-binding domain-containing protein... 33 1.7
sp|Q9WUR2|PECI_MOUSE Peroxisomal 3,2-trans-enoyl-CoA isomerase O... 32 3.0
sp|Q1PDC9|VP35_MABVR Polymerase cofactor VP35 OS=Lake Victoria m... 32 3.9
sp|Q6UY68|VP35_MABVO Polymerase cofactor VP35 OS=Lake Victoria m... 32 3.9
sp|P35259|VP35_MABVM Polymerase cofactor VP35 OS=Lake Victoria m... 32 3.9
sp|Q1PD52|VP35_MABVA Polymerase cofactor VP35 OS=Lake Victoria m... 32 3.9
sp|O54898|CAC1G_RAT Voltage-dependent T-type calcium channel sub... 32 5.1
sp|O43497|CAC1G_HUMAN Voltage-dependent T-type calcium channel s... 32 5.1
sp|Q03039|VP35_MABVP Polymerase cofactor VP35 OS=Lake Victoria m... 31 6.6
sp|Q9EQ60|CAC1H_RAT Voltage-dependent T-type calcium channel sub... 31 6.6
sp|O88427|CAC1H_MOUSE Voltage-dependent T-type calcium channel s... 31 6.6
sp|O95180|CAC1H_HUMAN Voltage-dependent T-type calcium channel s... 31 6.6

>sp|O75521|PECI_HUMAN Peroxisomal 3,2-trans-enoyl-CoA isomerase
OS=Homo sapiens GN=PECI PE=1 SV=3
Length = 359

Score = 37.4 bits (85), Expect = 0.093
Identities = 25/67 (37%), Positives = 32/67 (47%)
Frame = +1

Query: 103 DEPKALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSMSKTQAKRAFVQ 282
+E K LYAL QA EGP K +AW ALGS+ K A++ +V
Sbjct: 24 NEVKLKLYALYKQATEGP-----CNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVD 78

Query: 283 LLSFLLP 303
L+S L P
Sbjct: 79 LVSSLSP 85


>sp|Q66JD7|ACBD6_XENTR Acyl-CoA-binding domain-containing protein 6
OS=Xenopus tropicalis GN=acbd6 PE=2 SV=1
Length = 286

Score = 34.7 bits (78), Expect = 0.60
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1

Query: 214 RKQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHP-PLIETHKD 348
+K EAWKALG S QA +++ + L P DW P L E HK+
Sbjct: 84 KKWEAWKALGDYSCQQAMNEYIETVKKLDP---DWSPQALEEPHKE 126


>sp|A2VDR2|ACBD6_BOVIN Acyl-CoA-binding domain-containing protein 6
OS=Bos taurus GN=ACBD6 PE=2 SV=1
Length = 282

Score = 34.7 bits (78), Expect = 0.60
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1

Query: 214 RKQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHP 324
+K EAWKALG S +QA + ++ ++ L P W P
Sbjct: 94 QKWEAWKALGDSSPSQAMQEYIAVVKKLDPSWNPQSP 130


>sp|Q4V869|ACBD6_XENLA Acyl-CoA-binding domain-containing protein 6
OS=Xenopus laevis GN=acbd6 PE=2 SV=1
Length = 286

Score = 34.3 bits (77), Expect = 0.78
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1

Query: 214 RKQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIE 336
+K EAWKALG S QA +++ + L P DW P +E
Sbjct: 84 KKWEAWKALGDYSHQQAMTEYIETVKKLDP---DWSPQALE 121


>sp|Q9BR61|ACBD6_HUMAN Acyl-CoA-binding domain-containing protein 6
OS=Homo sapiens GN=ACBD6 PE=1 SV=1
Length = 282

Score = 34.3 bits (77), Expect = 0.78
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1

Query: 214 RKQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIETHKDEAS 357
+K EAWKALG S +QA + ++ ++ L P W+P + E EA+
Sbjct: 94 QKWEAWKALGDSSPSQAMQEYIAVVKKLDP---GWNPQIPEKKGKEAN 138


>sp|Q5RJK8|ACBD6_RAT Acyl-CoA-binding domain-containing protein 6
OS=Rattus norvegicus GN=Acbd6 PE=2 SV=1
Length = 282

Score = 33.1 bits (74), Expect = 1.7
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1

Query: 214 RKQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIETHKDEAS 357
+K EAWKALG S +QA + ++ + L P W+P + E E S
Sbjct: 94 QKWEAWKALGDSSPSQAMQEYIAAVKKLDP---GWNPQVSEKKGKEGS 138


>sp|Q9D061|ACBD6_MOUSE Acyl-CoA-binding domain-containing protein 6
OS=Mus musculus GN=Acbd6 PE=1 SV=2
Length = 282

Score = 33.1 bits (74), Expect = 1.7
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1

Query: 214 RKQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIETHKDEAS 357
+K EAWKALG S +QA + ++ + L P W+P + E E S
Sbjct: 94 QKWEAWKALGDSSPSQAMQEYIAAVKKLDP---GWNPQVSEKKGKEGS 138


>sp|Q9WUR2|PECI_MOUSE Peroxisomal 3,2-trans-enoyl-CoA isomerase
OS=Mus musculus GN=Peci PE=1 SV=1
Length = 358

Score = 32.3 bits (72), Expect = 3.0
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = +1

Query: 103 DEPKALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSMSKTQAKRAFVQ 282
+E K LYAL QA EG K +AW ALGS+ K A++ +V
Sbjct: 24 NEVKLRLYALYKQATEGT-----CNMPKPGMLDFVNKAKWDAWNALGSLPKETARQNYVD 78

Query: 283 LLSFL 297
L+S L
Sbjct: 79 LVSSL 83


>sp|Q1PDC9|VP35_MABVR Polymerase cofactor VP35 OS=Lake Victoria
marburgvirus (strain Ravn-87) GN=VP35 PE=3 SV=1
Length = 329

Score = 32.0 bits (71), Expect = 3.9
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1

Query: 102 LEKLERRRRPLGHEQLRCSPCFL 34
LEKL +RR+P G L+CSPC +
Sbjct: 30 LEKLYKRRKPKGTVGLQCSPCLI 52


>sp|Q6UY68|VP35_MABVO Polymerase cofactor VP35 OS=Lake Victoria
marburgvirus (strain Ozolin-75) GN=VP35 PE=3 SV=1
Length = 329

Score = 32.0 bits (71), Expect = 3.9
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1

Query: 102 LEKLERRRRPLGHEQLRCSPCFL 34
LEKL +RR+P G L+CSPC +
Sbjct: 30 LEKLYKRRKPKGTVGLQCSPCLM 52


tr_hit_id A9NTM9
Definition tr|A9NTM9|A9NTM9_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 116
Score (bit) 99.0
E-value 3.0e-19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961333|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0009_N06, 5'
(768 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NTM9|A9NTM9_PICSI Putative uncharacterized protein OS=Picea... 99 3e-19
tr|A9SNQ3|A9SNQ3_PHYPA Predicted protein OS=Physcomitrella paten... 87 2e-15
tr|B4R3Q9|B4R3Q9_DROSI GD15501 OS=Drosophila simulans GN=GD15501... 45 0.005
tr|B4I6G2|B4I6G2_DROSE GM22630 OS=Drosophila sechellia GN=GM2263... 45 0.005
tr|Q8IK25|Q8IK25_PLAF7 Acyl CoA binding protein, putative OS=Pla... 40 0.13
tr|Q4QQP5|Q4QQP5_XENLA MGC132021 protein (Fragment) OS=Xenopus l... 39 0.30
tr|Q3KPR0|Q3KPR0_XENLA MGC132021 protein OS=Xenopus laevis GN=MG... 39 0.30
tr|B5DEU3|B5DEU3_XENTR Putative uncharacterized protein OS=Xenop... 39 0.30
tr|Q9VRG6|Q9VRG6_DROME CG33713, isoform A OS=Drosophila melanoga... 39 0.30
tr|Q4UG27|Q4UG27_THEAN Acyl-coa-binding protein, putative OS=The... 39 0.39
tr|Q3ZC57|Q3ZC57_BOVIN Peroxisomal D3,D2-enoyl-CoA isomerase OS=... 38 0.66
tr|B3NYC8|B3NYC8_DROER GG17546 OS=Drosophila erecta GN=GG17546 P... 38 0.66
tr|A7SZV6|A7SZV6_NEMVE Predicted protein OS=Nematostella vectens... 38 0.66
tr|Q6CYA7|Q6CYA7_KLULA KLLA0A01870p OS=Kluyveromyces lactis GN=K... 38 0.66
tr|Q29I62|Q29I62_DROPS GA17261 OS=Drosophila pseudoobscura pseud... 38 0.87
tr|B4PZ24|B4PZ24_DROYA GE15306 OS=Drosophila yakuba GN=GE15306 P... 38 0.87
tr|A7SKC0|A7SKC0_NEMVE Predicted protein OS=Nematostella vectens... 38 0.87
tr|A7AV23|A7AV23_BABBO Acyl CoA binding protein OS=Babesia bovis... 38 0.87
tr|Q4N9P7|Q4N9P7_THEPA Acyl CoA binding protein, putative OS=The... 37 1.1
tr|Q9NYD2|Q9NYD2_HUMAN Hepatocellular carcinoma-associated antig... 37 1.1
tr|Q7L124|Q7L124_HUMAN PECI protein OS=Homo sapiens GN=PECI PE=2... 37 1.1
tr|Q6IBN4|Q6IBN4_HUMAN PECI protein OS=Homo sapiens GN=PECI PE=2... 37 1.1
tr|Q59E94|Q59E94_HUMAN Peroxisomal D3,D2-enoyl-CoA isomerase iso... 37 1.1
tr|Q53HG3|Q53HG3_HUMAN Peroxisomal D3,D2-enoyl-CoA isomerase iso... 37 1.1
tr|Q53GC8|Q53GC8_HUMAN Peroxisomal D3,D2-enoyl-CoA isomerase iso... 37 1.1
tr|B4DLL3|B4DLL3_HUMAN cDNA FLJ56683, highly similar to Peroxiso... 37 1.1
tr|Q6BY30|Q6BY30_DEBHA DEHA2A12892p OS=Debaryomyces hansenii GN=... 37 1.1
tr|A8I9X5|A8I9X5_CHLRE Predicted protein OS=Chlamydomonas reinha... 37 1.5
tr|B4N1I0|B4N1I0_DROWI GK16311 OS=Drosophila willistoni GN=GK163... 37 1.5
tr|Q7RP05|Q7RP05_PLAYO Acyl CoA binding protein, putative OS=Pla... 37 1.9

>tr|A9NTM9|A9NTM9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 163

Score = 99.0 bits (245), Expect = 3e-19
Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Frame = +1

Query: 43 WRAAKLFMAKGPSATLQFLKDEPKALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQ 222
W A LF+AKGPSATLQFL ++ KALLYA AQA++GP S + KQ
Sbjct: 41 WGTAMLFLAKGPSATLQFLPEKSKALLYAYKAQALDGPCPSGQDGSLAIDHALRV---KQ 97

Query: 223 EAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLI-----ETHKDEASRILSAF 375
EAWKALG M + QAKR F+ LL+ +LP WK+W+ E + DE+++IL F
Sbjct: 98 EAWKALGDMPRAQAKREFIDLLTEVLPEWKNWYNSYAAKVQKEENVDESAKILREF 153


>tr|A9SNQ3|A9SNQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_165853 PE=4 SV=1
Length = 140

Score = 86.7 bits (213), Expect = 2e-15
Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Frame = +1

Query: 43 WRAAKLFMAKGPSATLQFLKDEPKALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQ 222
WRAA F+AKGPSATLQ+L+ + ++ L+AL AQA++G + +Q
Sbjct: 10 WRAASYFLAKGPSATLQYLQKDVRSNLFALKAQALDGDCPPGQDGSMAMDPSLRI---RQ 66

Query: 223 EAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLI------ETHKDEASRILSAF 375
EAW AL MS+ QAKR FV LL+ +LP WK W E H+ EA +++ AF
Sbjct: 67 EAWNALKGMSREQAKRNFVDLLTEVLPEWKKWSADYASKTNSGEEHESEADKLVKAF 123


>tr|B4R3Q9|B4R3Q9_DROSI GD15501 OS=Drosophila simulans GN=GD15501
PE=4 SV=1
Length = 243

Score = 45.1 bits (105), Expect = 0.005
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1

Query: 217 KQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIETHKDEAS 357
K +AW+ LG+MS++ A++A+VQ L L P+W+ W P H E++
Sbjct: 62 KWQAWRNLGTMSQSAARQAYVQKLQELQPNWRSWRNPGWVVHSIESA 108


>tr|B4I6G2|B4I6G2_DROSE GM22630 OS=Drosophila sechellia GN=GM22630
PE=4 SV=1
Length = 243

Score = 45.1 bits (105), Expect = 0.005
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1

Query: 217 KQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIETHKDEAS 357
K +AW+ LG+MS++ A++A+VQ L L P+W+ W P H E++
Sbjct: 62 KWQAWRNLGTMSQSAARQAYVQKLQELQPNWRSWRNPGWVVHSIESA 108


>tr|Q8IK25|Q8IK25_PLAF7 Acyl CoA binding protein, putative
OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0015 PE=4
SV=1
Length = 90

Score = 40.4 bits (93), Expect = 0.13
Identities = 14/34 (41%), Positives = 27/34 (79%)
Frame = +1

Query: 214 RKQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKD 315
+K EAWK++ ++++ AK+ +V+L+S L P+W+D
Sbjct: 55 KKYEAWKSVENLNREDAKKRYVELVSALFPYWQD 88


>tr|Q4QQP5|Q4QQP5_XENLA MGC132021 protein (Fragment) OS=Xenopus
laevis GN=MGC132021 PE=2 SV=1
Length = 349

Score = 39.3 bits (90), Expect = 0.30
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +1

Query: 82 ATLQFLKDEP----KALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSM 249
+ L+ LK++P K LYAL QA +GP K +AW +LGS+
Sbjct: 4 SNLKLLKNDPGNEVKLKLYALFKQATQGP-----CNVSKPGMLDFVNKVKWDAWNSLGSL 58

Query: 250 SKTQAKRAFVQLLSFLL 300
SK A++++V+L+S L+
Sbjct: 59 SKDDARQSYVELVSSLV 75


>tr|Q3KPR0|Q3KPR0_XENLA MGC132021 protein OS=Xenopus laevis
GN=MGC132021 PE=2 SV=1
Length = 358

Score = 39.3 bits (90), Expect = 0.30
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +1

Query: 82 ATLQFLKDEP----KALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSM 249
+ L+ LK++P K LYAL QA +GP K +AW +LGS+
Sbjct: 13 SNLKLLKNDPGNEVKLKLYALFKQATQGP-----CNVSKPGMLDFVNKVKWDAWNSLGSL 67

Query: 250 SKTQAKRAFVQLLSFLL 300
SK A++++V+L+S L+
Sbjct: 68 SKDDARQSYVELVSSLV 84


>tr|B5DEU3|B5DEU3_XENTR Putative uncharacterized protein OS=Xenopus
tropicalis PE=2 SV=1
Length = 358

Score = 39.3 bits (90), Expect = 0.30
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +1

Query: 82 ATLQFLKDEP----KALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSM 249
+ L+ LK++P K LYAL QA +GP K +AWK+LGS+
Sbjct: 13 SNLKLLKNDPGNEVKLKLYALFKQATQGP-----CNVPKPGMLDFVNKVKWDAWKSLGSL 67

Query: 250 SKTQAKRAFVQLLSFLL 300
K A++++V+L+S L+
Sbjct: 68 PKDDARQSYVELVSSLV 84


>tr|Q9VRG6|Q9VRG6_DROME CG33713, isoform A OS=Drosophila
melanogaster GN=CG1704 PE=2 SV=2
Length = 243

Score = 39.3 bits (90), Expect = 0.30
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1

Query: 217 KQEAWKALGSMSKTQAKRAFVQLLSFLLPHWKDWHPPLIETHKDEA 354
K +AW+ LG+MS++ A++A+VQ L L P+W+ P H E+
Sbjct: 62 KWQAWRNLGTMSQSAARQAYVQKLQELQPNWRSRRNPGWVVHSIES 107


>tr|Q4UG27|Q4UG27_THEAN Acyl-coa-binding protein, putative
OS=Theileria annulata GN=TA19910 PE=4 SV=1
Length = 89

Score = 38.9 bits (89), Expect = 0.39
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = +1

Query: 103 DEPKALLYALDAQAMEGPFLSHEIXXXXXXXXXXXXVRKQEAWKALGSMSKTQAKRAFVQ 282
DE K L Y QA G + K E+W + MSK +AKR++V+
Sbjct: 23 DEQKLLFYKYFKQATVG-----DCNTSKPGFMDFKGKAKWESWNSAKGMSKEEAKRSYVE 77

Query: 283 LLSFLLPHWK 312
LL+ L P+WK
Sbjct: 78 LLTKLEPNWK 87