DK961369 |
Clone id |
TST39A01NGRL0009_O20 |
Library |
TST39 |
Length |
626 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0009_O20. 5' end sequence. |
Accession |
DK961369 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL19Contig1 |
Sequence |
GTAGTGGTGCCTCGGTGTATTTGGTGTTGAGCTTCTGTGAAGGCGTCTTTGCACACGCCT CCTGCAGGAGCTTAGCCTAACTTCTCGTCCGTCGCTCTTCCGGCTCCAGCGAAAATGAGA GAGTGCATCTCCATCCACATTGGCCAGGCTGGGATTCAGGTCGGCAATGCCTGCTGGGAG CTTTACTGTCTCGAACATGGCATCCAGCCAGATGGTCAGATGCCAAGTGACAAGACTGTT GGTGGAGGAGATGATGCATTTAACACTTTTTTAGTGAGACAGGGGCTGGGAAGCATGTGC CAAGGGCCATCTTTGTGGACCTGGAGCCAACTGTGATTGATGAGGTGCGAACTGGCACCT ATAGGCAGCTTTTCCACCCAGAGCAGCTCATAAGTGGCAAGGAGGATGCTGCCAACAACT TTGCCCGTGGCCATTATACCATTGGTAAAGAGATTGTGGACCTCTGCCTTGATCGCATCC GCAAATTGGCAGACAATTGCACAGGCCTGCAAGGTTTTCTTGTCTTTAATGCTGTGGGAG GTGGCACAGGGTCTGGCTTAGGATCGTTGCTTCTTGAAAGGCTCTCAGTTGATTACGGTA AGAAGTCCAAGCTGGGTTTTACTGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P29510 |
Definition |
sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana |
Align length |
120 |
Score (bit) |
205.0 |
E-value |
6.0e-82 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961369|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_O20, 5' (626 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsi... 205 6e-82 sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA... 205 2e-81 sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thalia... 205 2e-81 sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare GN... 205 2e-81 sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum... 203 2e-81 sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum... 203 2e-81 sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA ... 205 3e-81 sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUB... 203 7e-81 sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp... 202 9e-81 sp|Q6VAG1|TBA1_GOSHI Tubulin alpha-1 chain OS=Gossypium hirsutum... 203 2e-80 sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain OS=Hordeum vulgare GN... 202 2e-80 sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 ... 205 2e-80 sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 ... 205 2e-80 sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain OS=Eleusine indica GN... 205 2e-80 sp|Q9ZRB7|TBA_WHEAT Tubulin alpha chain OS=Triticum aestivum GN=... 201 3e-80 sp|Q9ZRJ4|TBA_CHLVU Tubulin alpha chain OS=Chlorella vulgaris GN... 202 8e-80 sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain OS=Anemia phyllitidis... 202 1e-79 sp|P09205|TBA2_CHLRE Tubulin alpha-2 chain OS=Chlamydomonas rein... 199 8e-79 sp|P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain OS=Volvox car... 199 8e-79 sp|P09204|TBA1_CHLRE Tubulin alpha-1 chain OS=Chlamydomonas rein... 199 8e-79 sp|P41351|TBA_TETTH Tubulin alpha chain OS=Tetrahymena thermophi... 202 8e-79 sp|P10872|TBA_TETPY Tubulin alpha chain OS=Tetrahymena pyriformi... 202 8e-79 sp|P22275|TBA3_MAIZE Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 ... 202 2e-77 sp|P28287|TBA_OXYGR Tubulin alpha chain OS=Oxytricha granulifera... 196 2e-77 sp|P07304|TBA1_STYLE Tubulin alpha-1 chain OS=Stylonychia lemnae... 196 1e-76 sp|P20363|TBA3_ARATH Tubulin alpha-3/alpha-5 chain OS=Arabidopsi... 204 3e-76 sp|P28752|TBA1_ORYSJ Tubulin alpha-1 chain OS=Oryza sativa subsp... 202 8e-76 sp|P11237|TBA1_NAEGR Tubulin alpha-1/2/3 chain OS=Naegleria grub... 198 1e-75 sp|Q3ZCJ7|TBA1C_BOVIN Tubulin alpha-1C chain OS=Bos taurus GN=TU... 187 1e-75 sp|Q40832|TBA2_PELFA Tubulin alpha-2 chain OS=Pelvetia fastigiat... 186 1e-75
>sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1 Length = 450
Score = 205 bits (521), Expect(2) = 6e-82 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 6e-82 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1 Length = 450
Score = 205 bits (521), Expect(2) = 2e-81 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 118 bits (296), Expect(2) = 2e-81 Identities = 53/59 (89%), Positives = 53/59 (89%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
>sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1 Length = 450
Score = 205 bits (521), Expect(2) = 2e-81 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 118 bits (296), Expect(2) = 2e-81 Identities = 53/59 (89%), Positives = 53/59 (89%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
>sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1 Length = 451
Score = 205 bits (521), Expect(2) = 2e-81 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 118 bits (296), Expect(2) = 2e-81 Identities = 53/59 (89%), Positives = 53/59 (89%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
>sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1 Length = 450
Score = 203 bits (516), Expect(2) = 2e-81 Identities = 101/120 (84%), Positives = 102/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 2e-81 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1 Length = 450
Score = 203 bits (516), Expect(2) = 2e-81 Identities = 101/120 (84%), Positives = 102/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 2e-81 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 SV=1 Length = 451
Score = 205 bits (522), Expect(2) = 3e-81 Identities = 103/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 117 bits (293), Expect(2) = 3e-81 Identities = 51/59 (86%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECIS+HIGQAGIQ+GNACWELYCLEHGIQP+GQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAG 59
>sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1 Length = 452
Score = 203 bits (516), Expect(2) = 7e-81 Identities = 101/120 (84%), Positives = 102/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 118 bits (296), Expect(2) = 7e-81 Identities = 53/59 (89%), Positives = 53/59 (89%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
>sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1 Length = 451
Score = 202 bits (515), Expect(2) = 9e-81 Identities = 101/120 (84%), Positives = 102/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 118 bits (296), Expect(2) = 9e-81 Identities = 53/59 (89%), Positives = 53/59 (89%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
>sp|Q6VAG1|TBA1_GOSHI Tubulin alpha-1 chain OS=Gossypium hirsutum PE=2 SV=1 Length = 451
Score = 203 bits (517), Expect(2) = 2e-80 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVF+AV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 117 bits (292), Expect(2) = 2e-80 Identities = 53/59 (89%), Positives = 53/59 (89%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAF TF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFYTFFSETGAG 59
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84UZ5 |
Definition |
tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii |
Align length |
120 |
Score (bit) |
205.0 |
E-value |
6.0e-81 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961369|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0009_O20, 5' (626 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii G... 205 6e-81 tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 205 8e-81 tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii ... 205 8e-81 tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidop... 205 8e-81 tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1 205 8e-81 tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 P... 205 8e-81 tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Popul... 205 8e-81 tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila ... 205 8e-81 tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 205 1e-80 tr|A7QZH1|A7QZH1_VITVI Chromosome chr7 scaffold_275, whole genom... 205 1e-80 tr|Q1ZZV1|Q1ZZV1_BRACM Tubulin alpha-1 chain OS=Brassica rapa su... 205 2e-80 tr|A9P817|A9P817_POPTR Putative uncharacterized protein OS=Popul... 205 2e-80 tr|A4K4Y4|A4K4Y4_WHEAT Alpha tubulin-3B (Alpha tubulin-3A) (Alph... 205 2e-80 tr|Q84XV0|Q84XV0_POPTM Alpha tubulin OS=Populus tremuloides PE=2... 203 2e-80 tr|Q84TK6|Q84TK6_POPTM Alpha-tubulin 1 OS=Populus tremuloides PE... 203 2e-80 tr|A9PL16|A9PL16_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 203 2e-80 tr|A9PHZ8|A9PHZ8_POPTR Putative uncharacterized protein OS=Popul... 203 2e-80 tr|A5YRY1|A5YRY1_POPTM Alpha-tubulin 5 OS=Populus tremuloides PE... 203 2e-80 tr|Q3EA24|Q3EA24_ARATH Uncharacterized protein At4g14960.1 OS=Ar... 205 2e-80 tr|Q8VXD1|Q8VXD1_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub... 204 3e-80 tr|Q8VXC9|Q8VXC9_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub... 204 3e-80 tr|Q38JI1|Q38JI1_SOLTU Putative uncharacterized protein OS=Solan... 204 3e-80 tr|A9PL18|A9PL18_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU... 203 3e-80 tr|A5BZF5|A5BZF5_VITVI Putative uncharacterized protein (Chromos... 203 3e-80 tr|A7QH45|A7QH45_VITVI Chromosome chr3 scaffold_95, whole genome... 205 4e-80 tr|Q8VXD0|Q8VXD0_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub... 204 4e-80 tr|A9SEI4|A9SEI4_PHYPA Predicted protein OS=Physcomitrella paten... 204 4e-80 tr|A5YRY0|A5YRY0_POPTM Alpha-tubulin 3 OS=Populus tremuloides PE... 202 4e-80 tr|Q8H6L8|Q8H6L8_GOSHI Alpha-tubulin 4 (Fragment) OS=Gossypium h... 203 4e-80 tr|Q93XB1|Q93XB1_ROSHC Alpha tubulin subunit OS=Rosa hybrid cult... 205 5e-80
>tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii GN=TUA1 PE=2 SV=1 Length = 450
Score = 205 bits (522), Expect(2) = 6e-81 Identities = 103/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 6e-81 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA10 PE=2 SV=1 Length = 450
Score = 205 bits (522), Expect(2) = 8e-81 Identities = 103/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 119 bits (299), Expect(2) = 8e-81 Identities = 53/59 (89%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii var. menziesii GN=AT1 PE=3 SV=1 Length = 451
Score = 205 bits (521), Expect(2) = 8e-81 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 8e-81 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=At1g04820 PE=2 SV=1 Length = 450
Score = 205 bits (521), Expect(2) = 8e-81 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 8e-81 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1 Length = 450
Score = 205 bits (521), Expect(2) = 8e-81 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 8e-81 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 PE=2 SV=1 Length = 451
Score = 205 bits (521), Expect(2) = 8e-81 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 8e-81 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 451
Score = 205 bits (521), Expect(2) = 8e-81 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 8e-81 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila PE=2 SV=1 Length = 450
Score = 205 bits (521), Expect(2) = 8e-81 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 120 bits (300), Expect(2) = 8e-81 Identities = 54/59 (91%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA6 PE=2 SV=1 Length = 450
Score = 205 bits (521), Expect(2) = 1e-80 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 119 bits (299), Expect(2) = 1e-80 Identities = 53/59 (89%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECIS+HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTF G G Sbjct: 1 MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
>tr|A7QZH1|A7QZH1_VITVI Chromosome chr7 scaffold_275, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010650001 PE=3 SV=1 Length = 451
Score = 205 bits (521), Expect(2) = 1e-80 Identities = 102/120 (85%), Positives = 103/120 (85%) Frame = +3
Query: 267 FFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 446 FFSETGAGKHVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG Sbjct: 52 FFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIG 111
Query: 447 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTV 626 KEIVDLCLDRIRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTV Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Score = 119 bits (299), Expect(2) = 1e-80 Identities = 53/59 (89%), Positives = 54/59 (91%) Frame = +1
Query: 115 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFLVRQGLG 291 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKT+GGGDDAFNTF G G Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGAG 59
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