DK961413 |
Clone id |
TST39A01NGRL0010_A18 |
Library |
TST39 |
Length |
355 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_A18. 5' end sequence. |
Accession |
DK961413 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL297Contig1 |
Sequence |
CGAGGAATCACCTGCTAGACACAGCCTTGTTTATAGAGGGATGATCCCCATTCTTGGAGA GGGTTCGGCAAGAGCTACTGACACAGAAGCTACTGATGCAATCCTTGGTGTGGCTTTGAA GACTGCAATCTCTAAGAAGCTTTGCAAAGTTGGTGATGCAGTTGTTGCTATTCATCGAAT TGGCATTGCCTCCGTTATCAAGATTATGGAAGTGAAATGAGGTTTGTGATGACGATGTTT TGATGTTATCAGCAATCGTCTGGATTTTATCACCTGAATTTTCATTTTTGCAGGCCATCG GTCATTGATTAAGCATGATTATTGATTAAGCACGAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P22200 |
Definition |
sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum |
Align length |
72 |
Score (bit) |
105.0 |
E-value |
5.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961413|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_A18, 5' (334 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme OS=Solan... 105 5e-23 sp|Q42806|KPYC_SOYBN Pyruvate kinase, cytosolic isozyme OS=Glyci... 104 2e-22 sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme OS=Nicot... 90 4e-18 sp|O65595|KPYC_ARATH Probable pyruvate kinase, cytosolic isozyme... 78 2e-14 sp|P00548|KPYK_CHICK Pyruvate kinase muscle isozyme OS=Gallus ga... 30 4.9 sp|P11980|KPYM_RAT Pyruvate kinase isozymes M1/M2 OS=Rattus norv... 29 6.4 sp|Q5NVN0|KPYM_PONAB Pyruvate kinase isozyme M1 OS=Pongo abelii ... 29 6.4 sp|P14618|KPYM_HUMAN Pyruvate kinase isozymes M1/M2 OS=Homo sapi... 29 6.4 sp|Q875Z9|KPYK_SACCA Pyruvate kinase OS=Saccharomyces castellii ... 29 6.4 sp|P52480|KPYM_MOUSE Pyruvate kinase isozymes M1/M2 OS=Mus muscu... 29 8.4 sp|Q92122|KPYK_XENLA Pyruvate kinase muscle isozyme OS=Xenopus l... 29 8.4 sp|O44006|KPYK_EIMTE Pyruvate kinase OS=Eimeria tenella GN=PYK P... 29 8.4
>sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1 Length = 510
Score = 105 bits (263), Expect = 5e-23 Identities = 51/72 (70%), Positives = 64/72 (88%) Frame = +2
Query: 2 EESPARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAIHRI 181 +E+PARHSLVYRG+IP+LGEGSA+ATD+E+T+ IL ALK+A+++ LCK GDAVVA+HRI Sbjct: 439 DETPARHSLVYRGLIPLLGEGSAKATDSESTEVILEAALKSAVTRGLCKPGDAVVALHRI 498
Query: 182 GIASVIKIMEVK 217 G ASVIKI VK Sbjct: 499 GSASVIKICVVK 510
>sp|Q42806|KPYC_SOYBN Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1 Length = 511
Score = 104 bits (259), Expect = 2e-22 Identities = 51/72 (70%), Positives = 61/72 (84%) Frame = +2
Query: 2 EESPARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAIHRI 181 +E+PARHSL+YRG+IPILGEGSA+ATD E+T+ IL ALK+A + LCK GDAVVA+HRI Sbjct: 440 DETPARHSLIYRGLIPILGEGSAKATDAESTEVILEAALKSATERALCKPGDAVVALHRI 499
Query: 182 GIASVIKIMEVK 217 G ASVIKI VK Sbjct: 500 GAASVIKICIVK 511
>sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1 Length = 508
Score = 89.7 bits (221), Expect = 4e-18 Identities = 43/72 (59%), Positives = 58/72 (80%) Frame = +2
Query: 2 EESPARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAIHRI 181 +ESPARHSL++RG++P+L GSARA+ E+T+ L AL+ A +K LCK GD+VVA+HR+ Sbjct: 437 DESPARHSLIFRGLVPVLHAGSARASHEESTEEALDFALQHAKTKGLCKQGDSVVALHRV 496
Query: 182 GIASVIKIMEVK 217 G ASVIKI+ VK Sbjct: 497 GTASVIKIVTVK 508
>sp|O65595|KPYC_ARATH Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1 Length = 497
Score = 77.8 bits (190), Expect = 2e-14 Identities = 39/71 (54%), Positives = 52/71 (73%) Frame = +2
Query: 5 ESPARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAIHRIG 184 E+PARHSL+YRG++P+L GSARA+ E+T+ L A + K+LCK GD+VVA+ R G Sbjct: 427 EAPARHSLIYRGLVPVLYAGSARASIDESTEETLEFASEYGKKKQLCKTGDSVVALFRTG 486
Query: 185 IASVIKIMEVK 217 A VIKI+ VK Sbjct: 487 NAIVIKILTVK 497
>sp|P00548|KPYK_CHICK Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2 Length = 530
Score = 29.6 bits (65), Expect = 4.9 Identities = 14/56 (25%), Positives = 27/56 (48%) Frame = +2
Query: 5 ESPARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAI 172 + AR + +YRG+ P+L + A E D + + + ++ K GD V+ + Sbjct: 456 DQTARQAHLYRGVFPVLCKQPAHDAWAEDVDLRVNLGMNVGKARGFFKTGDLVIVL 511
>sp|P11980|KPYM_RAT Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3 Length = 531
Score = 29.3 bits (64), Expect = 6.4 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +2
Query: 14 ARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAI 172 AR + +YRG+ P+L + + E D + +A+ ++ K GD V+ + Sbjct: 460 ARQAHLYRGIFPVLCKDAVLDAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVL 512
>sp|Q5NVN0|KPYM_PONAB Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3 Length = 531
Score = 29.3 bits (64), Expect = 6.4 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = +2
Query: 14 ARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAI 172 AR + +YRG+ P+L + + E D + A+ ++ K GD V+ + Sbjct: 460 ARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVL 512
>sp|P14618|KPYM_HUMAN Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4 Length = 531
Score = 29.3 bits (64), Expect = 6.4 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = +2
Query: 14 ARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAI 172 AR + +YRG+ P+L + + E D + A+ ++ K GD V+ + Sbjct: 460 ARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVL 512
>sp|Q875Z9|KPYK_SACCA Pyruvate kinase OS=Saccharomyces castellii GN=PYK1 PE=3 SV=1 Length = 501
Score = 29.3 bits (64), Expect = 6.4 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2
Query: 14 ARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAI 172 AR S + RG+ P + E + A TE + L ++ AI + K GD V+I Sbjct: 431 ARFSHLSRGVFPFVYEADSVADWTEDVELRLKFGIEKAIEMGVMKKGDTYVSI 483
>sp|P52480|KPYM_MOUSE Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4 Length = 531
Score = 28.9 bits (63), Expect = 8.4 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +2
Query: 14 ARHSLVYRGMIPILGEGSARATDTEATDAILGVALKTAISKKLCKVGDAVVAI 172 AR + +YRG+ P+L + + E D + +A+ ++ K GD V+ + Sbjct: 460 ARQAHLYRGIFPVLCKDAVLNAWAEDVDLRVNLAMDVGKARGFFKKGDVVIVL 512
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LR82 |
Definition |
tr|B8LR82|B8LR82_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
72 |
Score (bit) |
109.0 |
E-value |
6.0e-23 |
Report |
|