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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961424
Clone id TST39A01NGRL0010_B06
Library
Length 581
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_B06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TCCCCTTCAACTGACTCTTTCCCCCCCATACAAGGTATGTAGCGAAGCCATTGGAAACTT
GTAGCGTTCTCTCTCTCTCTCTCTCAAAGAGACTCTCTCTCTCTCTCGCACACACACACA
CACAGGCACACATACCCAAGGAAATGAGTAAAGAACGACGTTGGGAGAAGCAGATCGAGC
ATGACGAGCAGCTGCTACACAAGAATATAGAAAGAAAGGAGCAGCAGCAACGTCGACAAG
GACATTATTTCGCAGAGCTTCCGGCCATAAACATGACATATACACGCACCACCAGCTGCA
GGAACTCCATGTTGCAGGACTCAGCTTTCGCCCGTGATCAGCATACTCATGTCTCCAGCC
TCAAAGCCAGCAACCTTTTGCCCACTCTACGGAGATGGAGAGCGCAAAGCCTGAAGCAAA
CCGCCCTCAGTGGCGCGTCCATGGCGTCGCGCAGATCTGCTGCCCGCTCGCACTCCTGCT
TAAGTTTGGGGCTCACCTTAGCGCCATTGAGGTGCTTAAGCATGCAATTGCATTCTGATG
ATGAAGATGAAGGACAAAATGGAGCCAAACTTTTAACAGCG
■■Homology search results ■■ -
sp_hit_id Q86U86
Definition sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens
Align length 68
Score (bit) 36.6
E-value 0.093
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961424|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_B06, 5'
         (581 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1...    37   0.093
sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM...    36   0.16 
sp|Q6NS45|CCD66_MOUSE Coiled-coil domain-containing protein 66 O...    35   0.35 
sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1...    34   0.60 
sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120 OS=Arabidopsi...    33   1.3  
sp|A2RUB6|CCD66_HUMAN Coiled-coil domain-containing protein 66 O...    32   2.3  
sp|Q04791|SASB_ANAPL Fatty acyl-CoA hydrolase precursor, medium ...    32   3.0  
sp|Q5BGN2|YTH1_EMENI mRNA 3'-end-processing protein yth1 OS=Emer...    31   3.9  
sp|P51022|PNT1_DROME ETS-like protein pointed, isoform P1 OS=Dro...    31   3.9  
sp|Q6BSZ4|PACC_DEBHA pH-response transcription factor pacC/RIM10...    31   3.9  
sp|Q81BX6|Y3012_BACCR Putative adenine deaminase BC_3012 OS=Baci...    31   5.1  
sp|Q54EQ9|Y1586_DICDI Putative uncharacterized protein DDB_G0291...    31   5.1  
sp|Q8MY86|FGFR1_DUGJA Fibroblast growth factor receptor 1 OS=Dug...    30   6.7  
sp|O34909|YERA_BACSU Putative adenine deaminase yerA OS=Bacillus...    30   8.7  
sp|Q6HX62|Y3032_BACAN Putative adenine deaminase BA_3032/GBAA303...    30   8.7  
sp|Q9U3N5|SELT1_CAEEL Putative selT-like protein C35C5.3 OS=Caen...    30   8.7  
sp|P36080|RRP14_YEAST Ribosomal RNA-processing protein 14 OS=Sac...    30   8.7  
sp|O93829|PGTA_CANAL Geranylgeranyl transferase type-2 subunit a...    30   8.7  
sp|Q5RBD6|CCD66_PONAB Coiled-coil domain-containing protein 66 O...    30   8.7  
sp|Q9LYS6|CALS6_ARATH Putative callose synthase 6 OS=Arabidopsis...    30   8.7  
sp|Q55DE7|ATX2_DICDI Ataxin-2 homolog OS=Dictyostelium discoideu...    30   8.7  

>sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1
            SV=1
          Length = 1689

 Score = 36.6 bits (83), Expect = 0.093
 Identities = 19/68 (27%), Positives = 37/68 (54%)
 Frame = +3

Query: 108  AHTHTQAHIPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMTYTR 287
            A ++T  H+  ++ KER+ +   E +E  L +  E++E ++       A L  ++ TY++
Sbjct: 890  ALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQ 949

Query: 288  TTSCRNSM 311
              S +NSM
Sbjct: 950  DCSFKNSM 957


>sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM1
            PE=1 SV=1
          Length = 1633

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 18/68 (26%), Positives = 38/68 (55%)
 Frame = +3

Query: 108  AHTHTQAHIPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMTYTR 287
            A ++T  H+  ++ KE++ +   E +E  L +  E++E ++       A L +++ TY++
Sbjct: 888  ALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSSLHRTYSQ 947

Query: 288  TTSCRNSM 311
              S +NSM
Sbjct: 948  DCSFKNSM 955


>sp|Q6NS45|CCD66_MOUSE Coiled-coil domain-containing protein 66
           OS=Mus musculus GN=Ccdc66 PE=1 SV=3
          Length = 935

 Score = 34.7 bits (78), Expect = 0.35
 Identities = 21/92 (22%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
 Frame = +3

Query: 150 KERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMTYTRTTSCRNSMLQDSAF 329
           +ERR +KQ+EH + ++ +  E + +++  +     E   + +   R         ++   
Sbjct: 454 RERRRQKQLEHQKAIMAQVEENRRKKRLEEEQRKKEEQELELRLAREREEMQRQYEEDIL 513

Query: 330 ARDQHTHVSSLKASNLLPTLRRWR--AQSLKQ 419
            + Q   + +LK + L  T++R +  AQ LKQ
Sbjct: 514 KQRQREEIMTLKTNELFHTMQRAQELAQRLKQ 545


>sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1
            SV=3
          Length = 1634

 Score = 33.9 bits (76), Expect = 0.60
 Identities = 17/68 (25%), Positives = 36/68 (52%)
 Frame = +3

Query: 108  AHTHTQAHIPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMTYTR 287
            A ++T  H+  ++ KE++ +   E +E  L +  E++E ++         L  ++ TY++
Sbjct: 890  ALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGTTGLSGLHRTYSQ 949

Query: 288  TTSCRNSM 311
              S +NSM
Sbjct: 950  DCSFKNSM 957


>sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120 OS=Arabidopsis
           thaliana GN=BHLH120 PE=3 SV=1
          Length = 209

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
 Frame = +3

Query: 114 THTQAHIPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPA-INMTYTRT 290
           T  Q+H+P+E  + ++       +++LLH+NIER+ +Q+      FA L + + + Y + 
Sbjct: 10  TRHQSHMPQERDETKK-------EKKLLHRNIERQRRQE--MAILFASLRSQLPLKYIKA 60

Query: 291 TSCRNSMLQDS------AFARDQHTHVSSLKA 368
            S +             +F +D  T +  L A
Sbjct: 61  LSSQGKRAMSDHVNGAVSFIKDTQTRIKDLSA 92


>sp|A2RUB6|CCD66_HUMAN Coiled-coil domain-containing protein 66
           OS=Homo sapiens GN=CCDC66 PE=1 SV=4
          Length = 948

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +3

Query: 150 KERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMTYTRTTSCRNSMLQDSAF 329
           ++RR +KQ+EH + +  +  E++ ++Q  +     E     +   +         ++   
Sbjct: 457 RDRRRQKQLEHQKAITAQVEEKRRKKQLEEEQRKKEEQEEELRLAQEREEMQKQYEEDIL 516

Query: 330 ARDQHTHVSSLKASNLLPTLRRWR--AQSLKQ 419
            + Q   + +LK + L  T++R +  AQ LKQ
Sbjct: 517 KQKQKEEIMTLKTNELFQTMQRAQELAQRLKQ 548


>sp|Q04791|SASB_ANAPL Fatty acyl-CoA hydrolase precursor, medium
           chain OS=Anas platyrhynchos PE=1 SV=1
          Length = 557

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 240 LVDVAAAPFFLYSCVAAARHARSASPNVVLYSF 142
           L+D  A P F++S V  ARH R A   V  Y F
Sbjct: 409 LLDSIADPLFVFSAVEVARHHRDAGNPVYFYEF 441


>sp|Q5BGN2|YTH1_EMENI mRNA 3'-end-processing protein yth1
           OS=Emericella nidulans GN=yth1 PE=3 SV=1
          Length = 254

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +3

Query: 108 AHTHTQAHIPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQR 233
           AH     ++PK   +  + E+++EH+  L+ +  ER+ +++R
Sbjct: 190 AHPRWSENLPKPTIRVEKTEEELEHERNLIREEQERERERER 231


>sp|P51022|PNT1_DROME ETS-like protein pointed, isoform P1
           OS=Drosophila melanogaster GN=pnt PE=2 SV=1
          Length = 623

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
 Frame = +3

Query: 111 HTHTQAHIPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMT---- 278
           H+H   H  ++  ++++    ++H +Q   ++  + +QQQ+      A+LP   ++    
Sbjct: 97  HSH---HTMQQQLQQQQQSLLLQHPQQQQQQHSHQSQQQQQHGYGSSAQLPHHRLSGGST 153

Query: 279 -YTRTTSCRNSMLQDSAFARDQHTHVSSLKASNLLPTLRRWRAQSL 413
             T TTS  +S    S+ A  Q     S  A+NL+  L    A SL
Sbjct: 154 GSTTTTSSGSSSSGSSSSASSQGFANGSATANNLVGALSSSTAASL 199


>sp|Q6BSZ4|PACC_DEBHA pH-response transcription factor pacC/RIM101
           OS=Debaryomyces hansenii GN=RIM101 PE=3 SV=2
          Length = 617

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 117 HTQAHIPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHY 248
           H   H PK++ K  R  +Q EHD +  +++    EQ+Q RQ H+
Sbjct: 251 HADDH-PKKLKKAHR-RQQEEHDHEREYEHEHEHEQEQYRQSHF 292
tr_hit_id Q9NUX9
Definition tr|Q9NUX9|Q9NUX9_HUMAN cDNA FLJ11064 fis, clone PLACE1004824 OS=Homo sapiens
Align length 68
Score (bit) 36.6
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961424|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_B06, 5'
         (581 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9NUX9|Q9NUX9_HUMAN cDNA FLJ11064 fis, clone PLACE1004824 OS=...    37   1.0  
tr|B4LBK3|B4LBK3_DROVI GJ11337 OS=Drosophila virilis GN=GJ11337 ...    36   1.8  
tr|A7AW30|A7AW30_BABBO Adenosylhomocysteinase (S-adenosyl-L-homo...    35   2.3  
tr|Q54XM5|Q54XM5_DICDI Putative uncharacterized protein OS=Dicty...    35   4.0  
tr|A9VZY8|A9VZY8_METEP Integrase family protein OS=Methylobacter...    34   5.2  
tr|Q3EN20|Q3EN20_BACTI Adenine deaminase OS=Bacillus thuringiens...    34   5.2  
tr|B7ILN5|B7ILN5_BACCE Putative adenine deaminase OS=Bacillus ce...    34   5.2  
tr|Q54L33|Q54L33_DICDI Putative uncharacterized protein OS=Dicty...    34   5.2  
tr|Q0VPL1|Q0VPL1_ALCBS Putative uncharacterized protein OS=Alcan...    34   6.8  
tr|A6WCG2|A6WCG2_KINRD Sensor protein OS=Kineococcus radiotolera...    34   6.8  
tr|A8J795|A8J795_CHLRE Flagellar/basal body protein (Fragment) O...    34   6.8  
tr|A1D4Y0|A1D4Y0_NEOFI MRNA cleavage and polyadenylation specifi...    34   6.8  
tr|B4K0B9|B4K0B9_DROGR GH23565 OS=Drosophila grimshawi GN=GH2356...    33   8.8  
tr|A3EY12|A3EY12_MACHI Putative aryl hydrocarbon receptor nuclea...    33   8.8  
tr|B2ATH8|B2ATH8_PODAN Predicted CDS Pa_1_15910 OS=Podospora ans...    33   8.8  
tr|A7TQH3|A7TQH3_VANPO Putative uncharacterized protein OS=Vande...    33   8.8  

>tr|Q9NUX9|Q9NUX9_HUMAN cDNA FLJ11064 fis, clone PLACE1004824
           OS=Homo sapiens PE=2 SV=1
          Length = 289

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 19/68 (27%), Positives = 37/68 (54%)
 Frame = +3

Query: 108 AHTHTQAHIPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMTYTR 287
           A ++T  H+  ++ KER+ +   E +E  L +  E++E ++       A L  ++ TY++
Sbjct: 47  ALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQ 106

Query: 288 TTSCRNSM 311
             S +NSM
Sbjct: 107 DCSFKNSM 114


>tr|B4LBK3|B4LBK3_DROVI GJ11337 OS=Drosophila virilis GN=GJ11337
           PE=4 SV=1
          Length = 644

 Score = 35.8 bits (81), Expect = 1.8
 Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
 Frame = +3

Query: 144 MSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAEL----PAINMTYTRTTS 296
           + ++++ ++Q++H +Q+ H    ++ QQQ++Q H+FA++    P    TYT   S
Sbjct: 347 LQQQQQQQQQMQHMQQMQHMQQMQQMQQQQQQQHHFAQVQQQHPVAGPTYTHCCS 401


>tr|A7AW30|A7AW30_BABBO Adenosylhomocysteinase
           (S-adenosyl-L-homocysteinehydrolase) OS=Babesia bovis
           GN=BBOV_I001740 PE=3 SV=1
          Length = 491

 Score = 35.4 bits (80), Expect = 2.3
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 294 WWCVYMSCLWPEALRNNVLVDVAAAPFFL--YSCVAAARHARSAS 166
           WWCVY S  WP A    ++VD   + + +  Y      RHA+  S
Sbjct: 121 WWCVYQSLRWPNADGPQLIVDDGCSAYTMIKYGLDLERRHAKDGS 165


>tr|Q54XM5|Q54XM5_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0206235 PE=4 SV=1
          Length = 918

 Score = 34.7 bits (78), Expect = 4.0
 Identities = 22/91 (24%), Positives = 45/91 (49%)
 Frame = +3

Query: 123 QAHIPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMTYTRTTSCR 302
           Q HI +++ ++++ ++ ++  +Q   +  ++++QQQ++Q H     PA   T T TTS  
Sbjct: 96  QQHINQQLLQQQQ-QQLLQQQQQQQQQQQQQQQQQQQQQQHTTTTTPATTTTTTTTTSSS 154

Query: 303 NSMLQDSAFARDQHTHVSSLKASNLLPTLRR 395
           +S               SS   + + PT+ R
Sbjct: 155 SSS--------------SSTSTNKICPTISR 171


>tr|A9VZY8|A9VZY8_METEP Integrase family protein OS=Methylobacterium
           extorquens (strain PA1) GN=Mext_0473 PE=4 SV=1
          Length = 377

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 19/49 (38%), Positives = 29/49 (59%)
 Frame = +3

Query: 141 EMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMTYTR 287
           E  KE RWE Q++ ++ LLH N E +EQ  +R+     ++P I + Y R
Sbjct: 208 EAVKELRWE-QVDFEDGLLHLNPEEREQTSKRRP--VVKMPPILIAYLR 253


>tr|Q3EN20|Q3EN20_BACTI Adenine deaminase OS=Bacillus thuringiensis
           serovar israelensis ATCC 35646 GN=RBTH_08284 PE=4 SV=1
          Length = 589

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +3

Query: 162 WEKQIEHDEQLLHKNIERKEQQQRRQGHY--FAELPAINMTYTRTTSCRNSMLQDSAFAR 335
           W K +  D+++LH   E K   ++ +GH+   +E     +    T     +M    AFAR
Sbjct: 188 WPKLLHGDDEMLHWVQETKRLHKKVEGHFPGASETTLAKLKLLGTDCDHEAMTGQEAFAR 247

Query: 336 DQHTHVSSLKASNLLPTL 389
               +  SL+ S++ P L
Sbjct: 248 LMQGYTVSLRNSSIRPDL 265


>tr|B7ILN5|B7ILN5_BACCE Putative adenine deaminase OS=Bacillus
           cereus G9842 GN=BCG9842_B2218 PE=4 SV=1
          Length = 584

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +3

Query: 162 WEKQIEHDEQLLHKNIERKEQQQRRQGHY--FAELPAINMTYTRTTSCRNSMLQDSAFAR 335
           W K +  D+++LH   E K   ++ +GH+   +E     +    T     +M    AFAR
Sbjct: 183 WPKLLHGDDEMLHWVQETKRLHKKVEGHFPGASETTLAKLKLLGTDCDHEAMTGQEAFAR 242

Query: 336 DQHTHVSSLKASNLLPTL 389
               +  SL+ S++ P L
Sbjct: 243 LMQGYTVSLRNSSIRPDL 260


>tr|Q54L33|Q54L33_DICDI Putative uncharacterized protein
            OS=Dictyostelium discoideum GN=DDB_0187197 PE=4 SV=1
          Length = 5222

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 22/112 (19%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
 Frame = +3

Query: 21   PPHTRYVAKPLETCXXXXXXXXXXXXXXXAHTHTQAHIPKEMSKERRWEKQIEHDEQLLH 200
            P H++++ K +E C               ++ + Q H+ ++   +++ E Q + +++  +
Sbjct: 4247 PIHSQFLQKLIELCIQTHIIL--------SNANLQLHLQQQQEIQQQLEIQKQKEKEKEN 4298

Query: 201  KNIERKEQQQRRQGHYFAELPAINM-----------TYTRTTSCRNSMLQDS 323
            + +E+++QQQ++Q      LP  N+           T T TT+   + + D+
Sbjct: 4299 QQLEQEQQQQQQQPIIDGNLPTTNLNNDDSIITTITTTTTTTTTTTTTINDN 4350


>tr|Q0VPL1|Q0VPL1_ALCBS Putative uncharacterized protein
           OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 /
           DSM 11573) GN=ABO_1439 PE=4 SV=1
          Length = 205

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = +3

Query: 132 IPKEMSKERRWEKQIEHDEQLLHKNIERKEQQQRRQGHYFAELPAINMTYTR--TTSCRN 305
           + +   KER  EKQI   E+ L K  E   QQ +RQ  YFA+L  +   Y    TT+ + 
Sbjct: 20  LAERFDKER--EKQIAQLEKQLEKVRESLNQQLKRQREYFAKLEKLQAEYREKATTTIKR 77

Query: 306 SMLQDSAFARDQHTHVSSLKA 368
            + +    A D    V   +A
Sbjct: 78  QLDRARKTADDTRKQVDDSEA 98


>tr|A6WCG2|A6WCG2_KINRD Sensor protein OS=Kineococcus radiotolerans
           (strain ATCC BAA-149 / DSM 14245 / SRS30216)
           GN=Krad_3037 PE=3 SV=1
          Length = 509

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = -1

Query: 422 GLLQALRSPSP*SGQKVAGFEAGDMSMLITGES*VLQHGVPAAGGACICHVYGRKLCEI 246
           G + A R P P  G   A F  GD   L+TG+S VL      AG  C+  + G +  E+
Sbjct: 88  GTVPAFRGPGPTDGTLYARFAGGD---LLTGQSGVLDEPRSTAGNPCVRPLTGAQAREL 143