DK961451
Clone id TST39A01NGRL0010_C15
Library
Length 368
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_C15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGCCGCACAACTTTGTACAAGAAAGTTGGGTTTTTTTTGCTGCTCTATTTAGTTGTAAGA
GGATTTTATATGAGGATTTGCAAGATGAATTTTGATGTCCAGGTGACGGTCGCTCTTTTT
ATAACCCCGGTCAATGCGAAGGCTCTCCATTATTACCCAAAAAAAAAAAACAAATAACAA
AAAACGAAAAAAAACAAAAAAACAGTCAAATCAAATAAAGAGAATCCCCCCCCCTCTTTG
TTCAAAGGTGGAATTTAAAAAAAAAATTTCTTATAATTTTGTGGGAGCAAAAAGGCCAAT
TTCCCCAAAAAAAAAATCATTTTTTGGCCCCCGGCCAACCCCCCTTTTTGGGGGGGAAAA
AAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q10580
Definition sp|Q10580|SWAP_CAEEL Protein SWAP OS=Caenorhabditis elegans
Align length 21
Score (bit) 29.6
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961451|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_C15, 5'
(318 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q10580|SWAP_CAEEL Protein SWAP OS=Caenorhabditis elegans GN=s... 30 4.8

>sp|Q10580|SWAP_CAEEL Protein SWAP OS=Caenorhabditis elegans
GN=swp-1 PE=2 SV=1
Length = 749

Score = 29.6 bits (65), Expect = 4.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3

Query: 246 GAKRPISPKKKSFFGPRPTPL 308
GAKRP++P+K GPR P+
Sbjct: 277 GAKRPVTPEKPGAIGPRKKPV 297


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961451|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_C15, 5'
(318 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******