DK961451 [AcEST]

DK961451
Clone id	TST39A01NGRL0010_C15
Library	TST39
Length	368
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_C15. 5' end sequence.
Accession	DK961451
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL25Contig2
Sequence	GGCCGCACAACTTTGTACAAGAAAGTTGGGTTTTTTTTGCTGCTCTATTTAGTTGTAAGA GGATTTTATATGAGGATTTGCAAGATGAATTTTGATGTCCAGGTGACGGTCGCTCTTTTT ATAACCCCGGTCAATGCGAAGGCTCTCCATTATTACCCAAAAAAAAAAAACAAATAACAA AAAACGAAAAAAAACAAAAAAACAGTCAAATCAAATAAAGAGAATCCCCCCCCCTCTTTG TTCAAAGGTGGAATTTAAAAAAAAAATTTCTTATAATTTTGTGGGAGCAAAAAGGCCAAT TTCCCCAAAAAAAAAATCATTTTTTGGCCCCCGGCCAACCCCCCTTTTTGGGGGGGAAAA AAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q10580
Definition	sp\|Q10580\|SWAP_CAEEL Protein SWAP OS=Caenorhabditis elegans
Align length	21
Score (bit)	29.6
E-value	4.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK961451\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_C15, 5' (318 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q10580\|SWAP_CAEEL Protein SWAP OS=Caenorhabditis elegans GN=s... 30 4.8 >sp\|Q10580\|SWAP_CAEEL Protein SWAP OS=Caenorhabditis elegans GN=swp-1 PE=2 SV=1 Length = 749 Score = 29.6 bits (65), Expect = 4.8 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +3 Query: 246 GAKRPISPKKKSFFGPRPTPL 308 GAKRP++P+K GPR P+ Sbjct: 277 GAKRPVTPEKPGAIGPRKKPV 297
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK961451\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_C15, 5' (318 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****