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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961453
Clone id TST39A01NGRL0010_C17
Library
Length 677
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_C17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGGAAAAGAGGGCAAGGCTGGAGGAAGCTCATCACCAGCAGCAGAGCCTTGCGCGCTGCG
TGCGGTTAGTAGCTACTAGGCCTCATCGGCATCCCTTTCCGCCCATCAAGACGACCCACT
TGGCATTTGTCCCCGGGATCGCTGCAGGGCTTCAAGTTCACTTTCTTTCTGGTTTAACGC
GGTTTTCGTTGACCAGAGAGAGAGAGAGAGATAGAGAGATAGAGAGAGAGAGAGACTTTT
CTCATTTGAATGTTTCAATTTGTTTATTTGCGGATTCTTCCATCCTTGCATGACGAAGAT
CACAGAGTTTTCCTTTGTGGATTGAGAAAGATTGTTCTCGCACTCTGAGAGAGAGAGAGA
GAGTGCCTGTGGAAATTCAACTACAAAGCCTTCTCTTCGGCAATGACCCCAGCAGGCCCA
TGATGCATGCATTTCGTCCCCAGCATATTCTCTTTTCATGGAGACTACATGCATGCTTTG
AGCAGCTCTACCTAGTGAACGCTATAAATGGGCAACACCTGCGTCACATCGGGTCTTTAC
ACTAACCGAGGCAGCTTCTTTGGAGGAGCTGACTCATCCATCTCTAGGTTCTGGCAATCA
GGTGATCAAGATTCACTCAAGCAGAAAGAGAGCTCCATTGCCATCACAGAGCAGAGAAAC
GGAGATCATAGGGAAAG
■■Homology search results ■■ -
sp_hit_id Q9UT43
Definition sp|Q9UT43|YFRD_SCHPO Putative phospholipid-transporting ATPase C821.13c OS=Schizosaccharomyces pombe
Align length 67
Score (bit) 30.4
E-value 9.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961453|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_C17, 5'
         (677 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UT43|YFRD_SCHPO Putative phospholipid-transporting ATPase C...    30   9.0  

>sp|Q9UT43|YFRD_SCHPO Putative phospholipid-transporting ATPase
            C821.13c OS=Schizosaccharomyces pombe GN=SPAC821.13c PE=1
            SV=2
          Length = 1562

 Score = 30.4 bits (67), Expect = 9.0
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +3

Query: 249  NVSICLF---ADSSILA*RRSQSFPLWIEKDCSRTLRERERVPVEIQLQSLLFGNDPSRP 419
            N  ICLF   ADS+I+  +R +   L   KD S T  E+ R  +EI    +      SRP
Sbjct: 858  NGRICLFCKGADSAII--KRLRLSNLAKRKDKSVTKAEQARKSIEIDKAIIRNSQSTSRP 915

Query: 420  MMHAFRP 440
             + A RP
Sbjct: 916  SLTASRP 922
tr_hit_id Q93YJ0
Definition tr|Q93YJ0|Q93YJ0_BRARO Reverse transcriptase (Fragment) OS=Brassica rapa subsp. oleifera
Align length 69
Score (bit) 35.8
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961453|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_C17, 5'
         (677 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q93YJ0|Q93YJ0_BRARO Reverse transcriptase (Fragment) OS=Brass...    36   2.6  
tr|Q473Q3|Q473Q3_RALEJ Glutathione S-transferase, N-terminal:Glu...    35   4.4  
tr|B4SMV6|B4SMV6_STRM5 Glutathione S-transferase domain OS=Steno...    35   4.4  
tr|B2JDK7|B2JDK7_BURP8 Glutathione S-transferase domain OS=Burkh...    35   4.4  
tr|Q0KCP0|Q0KCP0_RALEH Glutathione S-transferase OS=Ralstonia eu...    35   5.7  
tr|B3R408|B3R408_CUPTR Putative glutathione S-transferase enzyme...    35   5.7  
tr|Q8W451|Q8W451_BRAOL Reverse transcriptase (Fragment) OS=Brass...    34   7.4  
tr|Q1JT79|Q1JT79_TOXGO Putative uncharacterized protein OS=Toxop...    34   9.7  

>tr|Q93YJ0|Q93YJ0_BRARO Reverse transcriptase (Fragment) OS=Brassica
           rapa subsp. oleifera GN=RT PE=4 SV=1
          Length = 88

 Score = 35.8 bits (81), Expect = 2.6
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +1

Query: 262 VYLRILPSLHDEDHRVFLCGLRKIVLAL*ERERECLWKFNYKAFSSAMTPAGP*CMHFVP 441
           VY++  P L D++    LC LRK +  L  R+    W   +  FS+ +   G  C H  P
Sbjct: 12  VYMKQPPGLEDKEKPHHLCKLRKAIYGL--RQSPRAW---FDKFSTFLLKFGFKCTHGDP 66

Query: 442 SIFSF-HGD 465
           S+F + HGD
Sbjct: 67  SLFVYLHGD 75


>tr|Q473Q3|Q473Q3_RALEJ Glutathione S-transferase,
           N-terminal:Glutathione S-transferase, C-terminal
           OS=Ralstonia eutropha (strain JMP134) GN=Reut_A1001 PE=4
           SV=1
          Length = 230

 Score = 35.0 bits (79), Expect = 4.4
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 503 YKWATPASHRVFTLTEAASLEELTHP-SLGSGNQ 601
           Y WATP  H+V  + E   LE   HP ++G+G+Q
Sbjct: 5   YSWATPNGHKVHIMLEECGLEYKVHPINIGAGDQ 38


>tr|B4SMV6|B4SMV6_STRM5 Glutathione S-transferase domain
           OS=Stenotrophomonas maltophilia (strain R551-3)
           GN=Smal_3866 PE=4 SV=1
          Length = 229

 Score = 35.0 bits (79), Expect = 4.4
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 503 YKWATPASHRVFTLTEAASLEELTHP-SLGSGNQ 601
           Y W TP  H+V  L E A LE   HP ++GSG+Q
Sbjct: 5   YYWPTPNGHKVTLLLEEAGLEYRIHPVNIGSGDQ 38


>tr|B2JDK7|B2JDK7_BURP8 Glutathione S-transferase domain
           OS=Burkholderia phymatum (strain DSM 17167 / STM815)
           GN=Bphy_1988 PE=4 SV=1
          Length = 233

 Score = 35.0 bits (79), Expect = 4.4
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 503 YKWATPASHRVFTLTEAASLEELTHP-SLGSGNQ 601
           Y WATP  H++  + E   LE   HP ++G+G+Q
Sbjct: 5   YSWATPNGHKIHIMLEETGLEYTAHPINIGAGDQ 38


>tr|Q0KCP0|Q0KCP0_RALEH Glutathione S-transferase OS=Ralstonia
           eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier
           337) GN=H16_A1090 PE=4 SV=1
          Length = 230

 Score = 34.7 bits (78), Expect = 5.7
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 503 YKWATPASHRVFTLTEAASLEELTHP-SLGSGNQ 601
           Y WATP  H+V  + E   LE   HP ++G+G+Q
Sbjct: 5   YTWATPNGHKVHIMLEECGLEYKVHPINIGAGDQ 38


>tr|B3R408|B3R408_CUPTR Putative glutathione S-transferase enzyme
           with thioredoxin-like domain OS=Cupriavidus taiwanensis
           (strain R1 / LMG 19424) GN=RALTA_A1075 PE=4 SV=1
          Length = 230

 Score = 34.7 bits (78), Expect = 5.7
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 503 YKWATPASHRVFTLTEAASLEELTHP-SLGSGNQ 601
           Y WATP  H+V  + E   LE   HP ++G+G+Q
Sbjct: 5   YTWATPNGHKVHIMLEECGLEYKVHPINIGAGDQ 38


>tr|Q8W451|Q8W451_BRAOL Reverse transcriptase (Fragment) OS=Brassica
           oleracea var. ramosa GN=RT PE=4 SV=1
          Length = 87

 Score = 34.3 bits (77), Expect = 7.4
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +1

Query: 262 VYLRILPSLHDEDHRVFLCGLRKIVLAL*ERERECLWKFNYKAFSSAMTPAGP*CMHFVP 441
           VY+R  P   D++H  ++C L K++  L +  R   W   +  FSS +   G  C    P
Sbjct: 12  VYMRQPPGFEDKEHPQYVCNLHKVIYGLKQTPR--AW---FDKFSSFLIEFGFICNSSHP 66

Query: 442 SIFSF 456
           S+F +
Sbjct: 67  SLFVY 71


>tr|Q1JT79|Q1JT79_TOXGO Putative uncharacterized protein OS=Toxoplasma
            gondii RH GN=TgIa.1430 PE=3 SV=1
          Length = 1342

 Score = 33.9 bits (76), Expect = 9.7
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 332  LFSHSERERESACGNSTTKPSLRQ*PQQAHDACISSP 442
            +  HSE ER+   G ST    L Q PQQ     +SSP
Sbjct: 931  IHEHSEEERQEETGTSTPADKLSQPPQQERSGSLSSP 967