DK961457 |
Clone id |
TST39A01NGRL0010_C22 |
Library |
TST39 |
Length |
712 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_C22. 5' end sequence. |
Accession |
DK961457 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL567Contig1 |
Sequence |
AAAAAACTCACACGCCCGCGCGCCTCTCGCCGCTCTCGCTTCTCCCAGCTCCAGTTCTTA TGCTATCTATGGAGCATGCGGCAGCAGCAGCAGCGACGTCCGCCGCAGCTTCCCCTCCCG CCTTCTCCTTTGGTGAAACCAGAGTCTCTTGGCGGCCCTTCTCTCGTGACTCCTCCGCCA GTGCTTACCATTGCCGCACAAACACTTGCAAGATCAGTCTTCTCAGAACAAGAGAGCATA CGGAGAGGCATCATGCCGGAGTAGCGGCTTCTTATACCCCACAAGCTCTCAAAGGTGACA GCGTTTCTCAAACCGAGGACTACACGAAGTATTTTGACTTTGTTGTGATCGGCAGTGGCA TAGCAGGACTACGATATGCACTTGATGTGGCCAAATGTGGTACTGTTGCTATCATTACAA AGGCTGAACCTCATGAGACCAATACATCCTACGCCCAGGGCGGAGTAAGTGCTGTTTTGG ATCCGCTTGACTCTGTTGAAAATCACATTCGGGACACTATTGTTGCTGGAGCTTATTTGT GTGATGAGGAGGCAGTTGAGGTTGTCTGCAGGGAAGGACCAGAGAGGGTGAAAGAGCTTA TCGCTATGGGAGCATCATTTGATCAAGGAGAAGATGGTCGTTTGCATCTTGCACGTGAGG GTGGCCACTCCCATCATCGAATCGTCCATGCTGCAGATATGACGGGTAAAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9KPA4 |
Definition |
sp|Q9KPA4|NADB_VIBCH L-aspartate oxidase OS=Vibrio cholerae |
Align length |
129 |
Score (bit) |
129.0 |
E-value |
2.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961457|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_C22, 5' (712 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9KPA4|NADB_VIBCH L-aspartate oxidase OS=Vibrio cholerae GN=n... 129 2e-29 sp|Q8ZD80|NADB_YERPE L-aspartate oxidase OS=Yersinia pestis GN=n... 119 2e-26 sp|Q9X8N8|NADB_STRCO L-aspartate oxidase OS=Streptomyces coelico... 119 2e-26 sp|P10902|NADB_ECOLI L-aspartate oxidase OS=Escherichia coli (st... 116 1e-25 sp|Q8XA23|NADB_ECO57 L-aspartate oxidase OS=Escherichia coli O15... 116 1e-25 sp|Q8ZMX9|NADB_SALTY L-aspartate oxidase OS=Salmonella typhimuri... 115 2e-25 sp|Q8Z4K0|NADB_SALTI L-aspartate oxidase OS=Salmonella typhi GN=... 115 2e-25 sp|Q51363|NADB_PSEAE L-aspartate oxidase OS=Pseudomonas aerugino... 114 4e-25 sp|Q8XWM7|NADB1_RALSO L-aspartate oxidase 1 OS=Ralstonia solanac... 112 3e-24 sp|P65499|NADB_MYCTU L-aspartate oxidase OS=Mycobacterium tuberc... 108 3e-23 sp|P65500|NADB_MYCBO L-aspartate oxidase OS=Mycobacterium bovis ... 108 3e-23 sp|P74562|NADB_SYNY3 L-aspartate oxidase OS=Synechocystis sp. (s... 106 1e-22 sp|Q8XQG4|NADB2_RALSO L-aspartate oxidase 2 OS=Ralstonia solanac... 106 1e-22 sp|Q9K107|NADB_NEIMB L-aspartate oxidase OS=Neisseria meningitid... 104 4e-22 sp|Q9JSX4|NADB_NEIMA L-aspartate oxidase OS=Neisseria meningitid... 104 4e-22 sp|Q49617|NADB_MYCLE L-aspartate oxidase OS=Mycobacterium leprae... 101 5e-21 sp|Q8YXJ6|NADB_ANASP L-aspartate oxidase OS=Anabaena sp. (strain... 100 8e-21 sp|Q98AV8|NADB_RHILO L-aspartate oxidase OS=Rhizobium loti GN=na... 96 1e-19 sp|Q97K95|NADB_CLOAB L-aspartate oxidase OS=Clostridium acetobut... 96 1e-19 sp|Q92R32|NADB_RHIME L-aspartate oxidase OS=Rhizobium meliloti G... 94 6e-19 sp|Q8ZQU3|DHSA_SALTY Succinate dehydrogenase flavoprotein subuni... 89 2e-17 sp|P0AC41|DHSA_ECOLI Succinate dehydrogenase flavoprotein subuni... 89 2e-17 sp|P0AC42|DHSA_ECOL6 Succinate dehydrogenase flavoprotein subuni... 89 2e-17 sp|P0AC43|DHSA_ECO57 Succinate dehydrogenase flavoprotein subuni... 89 2e-17 sp|P64174|FRDA_MYCTU Fumarate reductase flavoprotein subunit OS=... 86 2e-16 sp|P64175|FRDA_MYCBO Fumarate reductase flavoprotein subunit OS=... 86 2e-16 sp|Q8Y5N4|NADB_LISMO L-aspartate oxidase OS=Listeria monocytogen... 85 4e-16 sp|Q87D19|NADB_XYLFT L-aspartate oxidase OS=Xylella fastidiosa (... 84 6e-16 sp|Q9A4C3|NADB_CAUCR L-aspartate oxidase OS=Caulobacter crescent... 84 6e-16 sp|Q929Z2|NADB_LISIN L-aspartate oxidase OS=Listeria innocua GN=... 84 8e-16
>sp|Q9KPA4|NADB_VIBCH L-aspartate oxidase OS=Vibrio cholerae GN=nadB PE=3 SV=2 Length = 535
Score = 129 bits (323), Expect = 2e-29 Identities = 66/129 (51%), Positives = 85/129 (65%), Gaps = 5/129 (3%) Frame = +3
Query: 336 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 515 D +VIGSG AGL AL VA+ G V +++K E T YAQGG++AV D DS+E+H++D Sbjct: 10 DVLVIGSGAAGLSLALQVAQYGKVIVLSKGPRSEGATFYAQGGIAAVFDESDSIESHVQD 69
Query: 516 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGEDG-----RLHLAREGGHSHHR 680 T++AGA +CDE+ V + E V+ LI G FD+ ED R HL REGGHSH R Sbjct: 70 TLIAGAGICDEQTVRFIAEHAKECVQWLIDGGVPFDKEEDSDNDHPRYHLTREGGHSHRR 129
Query: 681 IVHAADMTG 707 I+HAAD TG Sbjct: 130 ILHAADATG 138
>sp|Q8ZD80|NADB_YERPE L-aspartate oxidase OS=Yersinia pestis GN=nadB PE=3 SV=2 Length = 533
Score = 119 bits (297), Expect = 2e-26 Identities = 64/130 (49%), Positives = 83/130 (63%), Gaps = 5/130 (3%) Frame = +3
Query: 336 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 515 D ++IGSG AGL AL +A V +++K +E T YAQGG++AV D DS+ +H+ D Sbjct: 10 DVLIIGSGAAGLSLALRLAPHCKVTVLSKGPLNEGATFYAQGGIAAVFDETDSISSHVDD 69
Query: 516 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFD-----QGEDGRLHLAREGGHSHHR 680 T++AGA LCD+EAVE + V+ LI G FD GE+ R HL REGGHSH R Sbjct: 70 TLIAGAGLCDKEAVEFIASNARSCVQWLIDQGVLFDTETSANGEE-RYHLTREGGHSHRR 128
Query: 681 IVHAADMTGK 710 I+H AD TGK Sbjct: 129 ILHTADATGK 138
>sp|Q9X8N8|NADB_STRCO L-aspartate oxidase OS=Streptomyces coelicolor GN=nadB PE=3 SV=1 Length = 580
Score = 119 bits (297), Expect = 2e-26 Identities = 63/126 (50%), Positives = 82/126 (65%), Gaps = 2/126 (1%) Frame = +3
Query: 336 DFVVIGSGIAGLRYALDVAKCGT-VAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIR 512 D VV+GSG+AGL AL G ++TKA + +T +AQGGV+A L D+ E H+ Sbjct: 20 DVVVVGSGVAGLTAALRCESAGLRTVVVTKARLDDGSTRWAQGGVAAALGEGDTPEQHLD 79
Query: 513 DTIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGEDGRLHLAREGGHSHHRIVHA 692 DT+VAGA LCD++AV ++ EGP+ V+ LIA GA FD+ +G L L REGGH RI HA Sbjct: 80 DTLVAGAGLCDQDAVRILVTEGPDAVRRLIATGAHFDESTEGGLALTREGGHHRRRIAHA 139
Query: 693 -ADMTG 707 D TG Sbjct: 140 GGDATG 145
>sp|P10902|NADB_ECOLI L-aspartate oxidase OS=Escherichia coli (strain K12) GN=nadB PE=1 SV=4 Length = 540
Score = 116 bits (291), Expect = 1e-25 Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 5/130 (3%) Frame = +3
Query: 336 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 515 D ++IGSG AGL AL +A V +++K E +T YAQGG++AV D DS+++H+ D Sbjct: 10 DVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVED 69
Query: 516 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFD-----QGEDGRLHLAREGGHSHHR 680 T++AGA +CD AVE V V+ LI G FD GE+ HL REGGHSH R Sbjct: 70 TLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEES-YHLTREGGHSHRR 128
Query: 681 IVHAADMTGK 710 I+HAAD TG+ Sbjct: 129 ILHAADATGR 138
>sp|Q8XA23|NADB_ECO57 L-aspartate oxidase OS=Escherichia coli O157:H7 GN=nadB PE=3 SV=1 Length = 540
Score = 116 bits (291), Expect = 1e-25 Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 5/130 (3%) Frame = +3
Query: 336 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 515 D ++IGSG AGL AL +A V +++K E +T YAQGG++AV D DS+++H+ D Sbjct: 10 DVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVED 69
Query: 516 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFD-----QGEDGRLHLAREGGHSHHR 680 T++AGA +CD AVE V V+ LI G FD GE+ HL REGGHSH R Sbjct: 70 TLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEES-YHLTREGGHSHRR 128
Query: 681 IVHAADMTGK 710 I+HAAD TG+ Sbjct: 129 ILHAADATGR 138
>sp|Q8ZMX9|NADB_SALTY L-aspartate oxidase OS=Salmonella typhimurium GN=nadB PE=3 SV=1 Length = 540
Score = 115 bits (289), Expect = 2e-25 Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 5/130 (3%) Frame = +3
Query: 336 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 515 D ++IGSG AGL AL +A+ V +++K E +T YAQGG++AV D DS+ +H+ D Sbjct: 10 DVLIIGSGAAGLSLALRLAEKHKVIVLSKGPVSEGSTFYAQGGIAAVFDETDSIASHVED 69
Query: 516 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFD-----QGEDGRLHLAREGGHSHHR 680 T++AGA +CD AVE V V+ LI G FD G++ HL REGGHSH R Sbjct: 70 TLIAGAGICDRHAVEFVASNARTCVQWLIDQGVLFDTHVQPNGKES-YHLTREGGHSHRR 128
Query: 681 IVHAADMTGK 710 I+HAAD TGK Sbjct: 129 ILHAADATGK 138
>sp|Q8Z4K0|NADB_SALTI L-aspartate oxidase OS=Salmonella typhi GN=nadB PE=3 SV=1 Length = 540
Score = 115 bits (289), Expect = 2e-25 Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 5/130 (3%) Frame = +3
Query: 336 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 515 D ++IGSG AGL AL +A+ V +++K E +T YAQGG++AV D DS+ +H+ D Sbjct: 10 DVLIIGSGAAGLSLALRLAEKHKVIVLSKGPVSEGSTFYAQGGIAAVFDETDSIASHVED 69
Query: 516 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFD-----QGEDGRLHLAREGGHSHHR 680 T++AGA +CD AVE V V+ LI G FD G++ HL REGGHSH R Sbjct: 70 TLIAGAGICDRHAVEFVASNARTCVQWLIDQGVLFDTHVQPNGKES-YHLTREGGHSHRR 128
Query: 681 IVHAADMTGK 710 I+HAAD TGK Sbjct: 129 ILHAADATGK 138
>sp|Q51363|NADB_PSEAE L-aspartate oxidase OS=Pseudomonas aeruginosa GN=nadB PE=3 SV=1 Length = 538
Score = 114 bits (286), Expect = 4e-25 Identities = 61/131 (46%), Positives = 81/131 (61%), Gaps = 7/131 (5%) Frame = +3
Query: 336 DFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIRD 515 D +VIGSG AGL AL + + +A+++K E + +T +AQGGV+AVLD D+VE+H+ D Sbjct: 8 DVLVIGSGAAGLSLALTLPEHLRIAVLSKGELSQGSTYWAQGGVAAVLDDTDTVESHVED 67
Query: 516 TIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGEDG-------RLHLAREGGHSH 674 T+VAG LC E+AV E ++ LI G F + E HL REGGHSH Sbjct: 68 TLVAGGGLCREDAVRFTVEHSREAIQWLIEQGVPFTRDEQHNHEEGSFEYHLTREGGHSH 127
Query: 675 HRIVHAADMTG 707 RI+HAAD TG Sbjct: 128 RRIIHAADATG 138
>sp|Q8XWM7|NADB1_RALSO L-aspartate oxidase 1 OS=Ralstonia solanacearum GN=nadB1 PE=3 SV=1 Length = 533
Score = 112 bits (279), Expect = 3e-24 Identities = 59/127 (46%), Positives = 77/127 (60%), Gaps = 2/127 (1%) Frame = +3
Query: 333 FDFVVIGSGIAGLRYALDVAKCGTVAIITKAEPHETNTSYAQGGVSAVLDPLDSVENHIR 512 FD V+GSG+AGL AL +A V +I+K E + +AQGG++AVLD DS + H+ Sbjct: 3 FDVAVVGSGLAGLTVALHLADHRRVVVISKRTLPEGASDWAQGGIAAVLDSNDSHDEHVD 62
Query: 513 DTIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGEDGRL--HLAREGGHSHHRIV 686 DT++AGA LCDE A + G ++ LI G F + L HL REGGH H RI+ Sbjct: 63 DTLIAGAGLCDEAATRYIVENGRAAIEWLIGHGVPFTRDARAELGFHLTREGGHRHRRII 122
Query: 687 HAADMTG 707 HAAD TG Sbjct: 123 HAADATG 129
>sp|P65499|NADB_MYCTU L-aspartate oxidase OS=Mycobacterium tuberculosis GN=nadB PE=3 SV=1 Length = 527
Score = 108 bits (270), Expect = 3e-23 Identities = 63/128 (49%), Positives = 82/128 (64%), Gaps = 4/128 (3%) Frame = +3
Query: 336 DFVVIGSGIAGLRYALDVAKCG-TVAIITKA-EPHETNTSYAQGGVSAVL-DPLDSVENH 506 D VVIG+G+AGL AL + G +V +++KA + H T T YAQGG++ VL D DSV+ H Sbjct: 11 DVVVIGTGVAGLAAALAADRAGRSVVVLSKAAQTHVTATHYAQGGIAVVLPDNDDSVDAH 70
Query: 507 IRDTIVAGAYLCDEEAVEVVCREGPERVKELIAMGASFDQGEDGRLHLAREGGHSHHRIV 686 + DT+ AGA LCD +AV + +G V +L+ GA D+ GR L REGGHS RIV Sbjct: 71 VADTLAAGAGLCDPDAVYSIVADGYRAVTDLVGAGARLDESVPGRWALTREGGHSRRRIV 130
Query: 687 HA-ADMTG 707 HA D TG Sbjct: 131 HAGGDATG 138
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TS37 |
Definition |
tr|A9TS37|A9TS37_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
175 |
Score (bit) |
235.0 |
E-value |
2.0e-60 |
Report |
|