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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961461
Clone id TST39A01NGRL0010_D02
Library
Length 603
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_D02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGGCTTTGCCGCCGCCTCCTCCTCCTCTTCCTCTGCTCCCTCTCTCTCTCTCTCTCACA
CACACACACACACACACACACTCTCACACACAATAGCTAGTTCTCCTCCTCCTCCTCCTC
CTCTCACCCCCCTCACAGGATAGCCACTCTTCTTCTTTTTCCTCCCATACAATACTCAAT
ACACAGCGCTCTCTCATGTATCACCTCAAGCTTCATCAAATTGTCCGTTTACGTGAAGCG
CTTCAAAAATGGAGAAAACTGGCTCACAAGCGGAAGAGCTTCTCGTCTAGCTCAAGCCGG
CGCGGTGCAACATCCTCCATTCGTGTACCGTCTGGGCATCTTGCAGTGTATGGGGGACAG
GAGCGAGATTTTTTTTTTCCCCCCCCCCCCGCTTCTTTCTCATCCACTCTAAAAAAAAAA
AGGGGAGGAAGACAGAAGAAGAGGTCGGATTTCATTACGAAGGTGGGCTCACCATCCCTT
GCGAAGTCTCTGCATTCGAACGCTTGCTCCACCTTATGCAAGGTAAACATGTTGCACATA
GCATGCCTATGTTGATGATGAGGGTTTTTCATGGACACCAGCACTTTGATCTGTCAAGGG
AGG
■■Homology search results ■■ -
sp_hit_id P33083
Definition sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max
Align length 27
Score (bit) 32.0
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961461|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_D02, 5'
         (586 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=...    32   2.3  
sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max P...    31   4.0  
sp|Q6S545|A26C3_HUMAN ANKRD26-like family C member 3 OS=Homo sap...    31   5.2  

>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2
           SV=1
          Length = 90

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 412 KTEEEVGFHY-EGGLTIPCEVSAFERL 489
           + EEE G+H+  GGLTIPC    F+ +
Sbjct: 59  QAEEEFGYHHPNGGLTIPCSEDVFQHI 85


>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2
           SV=1
          Length = 82

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 412 KTEEEVGF-HYEGGLTIPCEVSAFERL 489
           + EEE G+ H  GGLTIPC    F+R+
Sbjct: 51  QAEEEFGYDHPMGGLTIPCSEEVFQRI 77


>sp|Q6S545|A26C3_HUMAN ANKRD26-like family C member 3 OS=Homo
           sapiens GN=A26C3 PE=2 SV=3
          Length = 545

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 551 KTLIINIGMLCATCLPCIRWSKRSNAETS 465
           KTL   +G  C  C PC R S +SN  TS
Sbjct: 92  KTLRSKMGKWCCHCFPCCRGSGKSNVGTS 120
tr_hit_id Q9M712
Definition tr|Q9M712|Q9M712_MAIZE Putative uncharacterized protein saur1 OS=Zea mays
Align length 32
Score (bit) 42.0
E-value 3.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961461|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_D02, 5'
         (586 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9M712|Q9M712_MAIZE Putative uncharacterized protein saur1 OS...    42   3e-06
tr|Q0D9S2|Q0D9S2_ORYSJ Os06g0701900 protein OS=Oryza sativa subs...    40   2e-05
tr|Q5Z8X4|Q5Z8X4_ORYSJ Auxin-induced protein-like OS=Oryza sativ...    40   2e-05
tr|A2YGQ1|A2YGQ1_ORYSI Putative uncharacterized protein OS=Oryza...    40   2e-05
tr|A5C9E6|A5C9E6_VITVI Putative uncharacterized protein OS=Vitis...    38   7e-05
tr|Q6YXW3|Q6YXW3_ORYSJ Auxin-induced protein-like OS=Oryza sativ...    43   3e-04
tr|A3A326|A3A326_ORYSJ Putative uncharacterized protein OS=Oryza...    43   4e-04
tr|B8LN65|B8LN65_PICSI Putative uncharacterized protein OS=Picea...    42   5e-04
tr|A2X0T7|A2X0T7_ORYSI Putative uncharacterized protein OS=Oryza...    42   5e-04
tr|A7QV31|A7QV31_VITVI Chromosome undetermined scaffold_184, who...    35   7e-04
tr|Q9LEU2|Q9LEU2_ARATH Putative uncharacterized protein T30N20_2...    34   0.001
tr|Q9LR01|Q9LR01_ARATH F10A5.20 OS=Arabidopsis thaliana PE=4 SV=1      32   0.002
tr|A7PYC4|A7PYC4_VITVI Chromosome chr15 scaffold_37, whole genom...    39   0.002
tr|A7PDR4|A7PDR4_VITVI Chromosome chr11 scaffold_13, whole genom...    42   0.002
tr|A5ASD7|A5ASD7_VITVI Putative uncharacterized protein OS=Vitis...    35   0.005
tr|Q8LBA1|Q8LBA1_ARATH Auxin-induced protein, putative OS=Arabid...    32   0.005
tr|A7NSY1|A7NSY1_VITVI Chromosome chr18 scaffold_1, whole genome...    35   0.005
tr|Q0E405|Q0E405_ORYSJ Os02g0143400 protein OS=Oryza sativa subs...    39   0.005
tr|Q8H6T6|Q8H6T6_PHAVU Auxin-regulated protein OS=Phaseolus vulg...    40   0.006
tr|Q9FXI2|Q9FXI2_ARATH F6F9.11 protein OS=Arabidopsis thaliana G...    33   0.006
tr|A0MF00|A0MF00_ARATH Putative uncharacterized protein (Fragmen...    39   0.008
tr|Q9M249|Q9M249_ARATH Putative uncharacterized protein F7M19_13...    39   0.008
tr|A5BVS9|A5BVS9_VITVI Putative uncharacterized protein OS=Vitis...    35   0.010
tr|O22150|O22150_ARATH Putative auxin-regulated protein OS=Arabi...    38   0.010
tr|A7Q496|A7Q496_VITVI Chromosome chr9 scaffold_49, whole genome...    43   0.011
tr|A7P420|A7P420_VITVI Chromosome chr1 scaffold_5, whole genome ...    43   0.011
tr|A5C9E4|A5C9E4_VITVI Putative uncharacterized protein OS=Vitis...    43   0.011
tr|Q2V359|Q2V359_ARATH Uncharacterized protein At5g20810.2 OS=Ar...    40   0.013
tr|Q8GWV6|Q8GWV6_ARATH Putative uncharacterized protein At5g2081...    40   0.013
tr|A9P7Y9|A9P7Y9_POPTR Putative uncharacterized protein OS=Popul...    33   0.013

>tr|Q9M712|Q9M712_MAIZE Putative uncharacterized protein saur1
           OS=Zea mays GN=saur1 PE=2 SV=1
          Length = 147

 Score = 42.0 bits (97), Expect(2) = 3e-06
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +1

Query: 409 RKTEEEVGFHYEGGLTIPCEVSAFERLLHLMQ 504
           R+ EEE GF +EG L IPC+V +F+ +L L+Q
Sbjct: 87  REAEEEFGFRHEGALRIPCDVDSFQGILRLVQ 118



 Score = 32.0 bits (71), Expect(2) = 3e-06
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +2

Query: 191 KLHQIVRLREALQKWRKLAHKXXXXXXXXXXXXXXXXXXVPSGHLAVYGGQE 346
           K+  IVRL++ L+KW+KLA                    VP G  AVY G+E
Sbjct: 21  KIRDIVRLQQLLKKWKKLA------TVTPSAASSGGRSSVPRGSFAVYVGEE 66


>tr|Q0D9S2|Q0D9S2_ORYSJ Os06g0701900 protein OS=Oryza sativa subsp.
           japonica GN=Os06g0701900 PE=4 SV=1
          Length = 312

 Score = 40.0 bits (92), Expect(2) = 2e-05
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +1

Query: 409 RKTEEEVGFHYEGGLTIPCEVSAFERLLHLM 501
           R  EEE GF ++G L IPC+V+AFE  L L+
Sbjct: 254 RDAEEEFGFRHQGALRIPCDVAAFEATLRLV 284



 Score = 31.2 bits (69), Expect(2) = 2e-05
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 191 KLHQIVRLREALQKWRKLAHKXXXXXXXXXXXXXXXXXXVPSGHLAVYGGQE 346
           K+  IVRL++ L++W+KLA                    VP G  AVY G+E
Sbjct: 193 KIRDIVRLQQLLKRWKKLA-----------TMAPGGRSGVPKGSFAVYVGEE 233


>tr|Q5Z8X4|Q5Z8X4_ORYSJ Auxin-induced protein-like OS=Oryza sativa
           subsp. japonica GN=P0596H10.21 PE=4 SV=1
          Length = 134

 Score = 40.0 bits (92), Expect(2) = 2e-05
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +1

Query: 409 RKTEEEVGFHYEGGLTIPCEVSAFERLLHLM 501
           R  EEE GF ++G L IPC+V+AFE  L L+
Sbjct: 76  RDAEEEFGFRHQGALRIPCDVAAFEATLRLV 106



 Score = 31.2 bits (69), Expect(2) = 2e-05
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 191 KLHQIVRLREALQKWRKLAHKXXXXXXXXXXXXXXXXXXVPSGHLAVYGGQE 346
           K+  IVRL++ L++W+KLA                    VP G  AVY G+E
Sbjct: 15  KIRDIVRLQQLLKRWKKLA-----------TMAPGGRSGVPKGSFAVYVGEE 55


>tr|A2YGQ1|A2YGQ1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_24361 PE=4 SV=1
          Length = 134

 Score = 40.0 bits (92), Expect(2) = 2e-05
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +1

Query: 409 RKTEEEVGFHYEGGLTIPCEVSAFERLLHLM 501
           R  EEE GF ++G L IPC+V+AFE  L L+
Sbjct: 76  RDAEEEFGFRHQGALRIPCDVAAFEATLRLV 106



 Score = 31.2 bits (69), Expect(2) = 2e-05
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 191 KLHQIVRLREALQKWRKLAHKXXXXXXXXXXXXXXXXXXVPSGHLAVYGGQE 346
           K+  IVRL++ L++W+KLA                    VP G  AVY G+E
Sbjct: 15  KIRDIVRLQQLLKRWKKLA-----------TMAPGGRSGVPKGSFAVYVGEE 55


>tr|A5C9E6|A5C9E6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_011169 PE=4 SV=1
          Length = 170

 Score = 38.1 bits (87), Expect(2) = 7e-05
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +1

Query: 409 RKTEEEVGFHYEGGLTIPCEVSAFERLLHLMQ 504
           ++ EEE GF + GG+ +PCEV  F ++L  ++
Sbjct: 88  KRAEEEHGFKFSGGIVVPCEVGFFRKVLEFLE 119



 Score = 31.2 bits (69), Expect(2) = 7e-05
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
 Frame = +2

Query: 188 LKLHQIVRLREALQKWRKLAHKXXXXXXXXXXXXXXXXXX----------VPSGHLAVYG 337
           LK++QIVRL++ ++KW+ ++ K                             PSG LAVY 
Sbjct: 5   LKINQIVRLKQVMKKWKAMSMKLRHGPSPDATDTDTDSEIDTDRGASTPRTPSGFLAVYV 64

Query: 338 GQERD 352
             ER+
Sbjct: 65  ASERE 69


>tr|Q6YXW3|Q6YXW3_ORYSJ Auxin-induced protein-like OS=Oryza sativa
           subsp. japonica GN=OSJNBa0064G16.6 PE=4 SV=1
          Length = 154

 Score = 42.7 bits (99), Expect(2) = 3e-04
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +1

Query: 409 RKTEEEVGFHYEGGLTIPCEVSAFERLLHLMQGK 510
           RK EEE GF +EG L IPC+V  FE +L L+  K
Sbjct: 79  RKAEEEFGFQHEGALRIPCDVEVFEGILRLVGRK 112



 Score = 24.3 bits (51), Expect(2) = 3e-04
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +2

Query: 191 KLHQIVRLREALQKWRKLAHKXXXXXXXXXXXXXXXXXXVPSGHLAVYGGQE 346
           K+  IVRL + L++W++ A                    VP G  AV  G+E
Sbjct: 12  KIRDIVRLHQLLKRWKRAA-----LAPKAGKNNNGGGASVPKGFFAVCVGEE 58


>tr|A3A326|A3A326_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_005198 PE=4 SV=1
          Length = 130

 Score = 42.7 bits (99), Expect(2) = 4e-04
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +1

Query: 409 RKTEEEVGFHYEGGLTIPCEVSAFERLLHLMQGK 510
           RK EEE GF +EG L IPC+V  FE +L L+  K
Sbjct: 79  RKAEEEFGFQHEGALRIPCDVEVFEGILRLVGRK 112



 Score = 24.3 bits (51), Expect(2) = 4e-04
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +2

Query: 191 KLHQIVRLREALQKWRKLAHKXXXXXXXXXXXXXXXXXXVPSGHLAVYGGQE 346
           K+  IVRL + L++W++ A                    VP G  AV  G+E
Sbjct: 12  KIRDIVRLHQLLKRWKRAA-----LAPKAGKNNNGGGASVPKGFFAVCVGEE 58


>tr|B8LN65|B8LN65_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 139

 Score = 42.0 bits (97), Expect(2) = 5e-04
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +1

Query: 412 KTEEEVGFHYEGGLTIPCEVSAFERLLHL 498
           + EEE GF ++GGLTIPCEVS F ++L +
Sbjct: 103 RAEEEFGFDHQGGLTIPCEVSVFTQVLRV 131



 Score = 24.6 bits (52), Expect(2) = 5e-04
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 308 VPSGHLAVYGGQER 349
           VP G+LAVY G+ER
Sbjct: 69  VPEGYLAVYVGRER 82


>tr|A2X0T7|A2X0T7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05820 PE=4 SV=1
          Length = 130

 Score = 42.4 bits (98), Expect(2) = 5e-04
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = +1

Query: 409 RKTEEEVGFHYEGGLTIPCEVSAFERLLHLMQGK 510
           RK EEE GF +EG L IPC+V  FE +L L   K
Sbjct: 79  RKAEEEFGFQHEGALRIPCDVEVFEGILRLFGRK 112



 Score = 24.3 bits (51), Expect(2) = 5e-04
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +2

Query: 191 KLHQIVRLREALQKWRKLAHKXXXXXXXXXXXXXXXXXXVPSGHLAVYGGQE 346
           K+  IVRL + L++W++ A                    VP G  AV  G+E
Sbjct: 12  KIRDIVRLHQLLKRWKRAA-----LAPKPGKNNNGGGASVPKGFFAVCVGEE 58


>tr|A7QV31|A7QV31_VITVI Chromosome undetermined scaffold_184, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00007142001 PE=4 SV=1
          Length = 262

 Score = 35.4 bits (80), Expect(2) = 7e-04
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 412 KTEEEVGFHYEGGLTIPCEVSAFERLLHLMQ 504
           K EEE G    GGL +PCEV  F+ +L  ++
Sbjct: 187 KAEEEFGLRSSGGLVLPCEVGFFKEVLRFLE 217



 Score = 30.4 bits (67), Expect(2) = 7e-04
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
 Frame = +2

Query: 191 KLHQIVRLREALQKWRKLA-----HKXXXXXXXXXXXXXXXXXXVPSGHLAVYGGQER 349
           K+ QIVRL++ +Q+W+ ++                          PSG LAVY G +R
Sbjct: 109 KIRQIVRLKQVMQRWKTMSVSLRPRSIRSFSDSDSDCTSGSIRRTPSGFLAVYVGADR 166