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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961475
Clone id TST39A01NGRL0010_D18
Library
Length 353
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_D18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAAGCTTTGAAAAGTGTACAAGCTAGATCTAACTCCTTAGTTCCATACGAGCTGAAGGAA
GTAGTGACAGCACATGCTGAGGTCACTAATGAACATACCAAGTTCAACATCTTGTTCAAG
GTGCAGAGAGGATCAAAAGAAGAACAGTTCAAGGCTGAGGTTTTGCGGACAGTGGTAGGA
GCCTGGACACTCAAGGATCTCCAACAACATCACTGAAAACAAGCAACATAATTCTATATA
ATGTGTGGAAGCACCTGTCGTGCTTAAAACAAGGCTCGACATATGAAGAATGTGCATAAC
TTACCCTTCAAGCGGATTATAAAATTGCGCAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q0JNR2
Definition sp|Q0JNR2|CYT12_ORYSJ Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica
Align length 70
Score (bit) 83.2
E-value 4.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961475|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_D18, 5'
         (330 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0JNR2|CYT12_ORYSJ Cysteine proteinase inhibitor 12 OS=Oryza ...    83   4e-16
sp|Q8H0X6|CYT6_ARATH Cysteine proteinase inhibitor 6 OS=Arabidop...    80   3e-15
sp|Q8LC76|CYT7_ARATH Cysteine proteinase inhibitor 7 OS=Arabidop...    61   2e-09
sp|P45920|YQBD_BACSU Uncharacterized protein yqbD OS=Bacillus su...    33   0.45 
sp|P16589|ITRP_HALRO Trypsin inhibitor OS=Halocynthia roretzi PE...    32   1.3  
sp|O35544|EAA4_MOUSE Excitatory amino acid transporter 4 OS=Mus ...    32   1.3  
sp|Q8G3Y5|IF2_BIFLO Translation initiation factor IF-2 OS=Bifido...    30   2.9  
sp|A1A0A2|IF2_BIFAA Translation initiation factor IF-2 OS=Bifido...    30   2.9  
sp|Q5KIA9|SET1_CRYNE Histone-lysine N-methyltransferase, H3 lysi...    30   5.0  

>sp|Q0JNR2|CYT12_ORYSJ Cysteine proteinase inhibitor 12 OS=Oryza
           sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1
          Length = 250

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 40/70 (57%), Positives = 53/70 (75%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+KS+Q RSNSL PYEL E+V A AEV  +  KF+IL K++RG+KEE+FKAEV + + GA
Sbjct: 175 AVKSIQQRSNSLFPYELLEIVRAKAEVVEDFAKFDILMKLKRGNKEEKFKAEVHKNLEGA 234

Query: 184 WTLKDLQQHH 213
           + L  +QQ H
Sbjct: 235 FVLNQMQQEH 244


>sp|Q8H0X6|CYT6_ARATH Cysteine proteinase inhibitor 6 OS=Arabidopsis
           thaliana GN=CYS6 PE=1 SV=2
          Length = 234

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 40/71 (56%), Positives = 51/71 (71%)
 Frame = +1

Query: 1   EALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVG 180
           +A+K++Q RSNSL PYEL EVV A AEVT E  K+N+L K++RG KEE+FK EV +   G
Sbjct: 163 QAVKTIQQRSNSLFPYELLEVVHAKAEVTGEAAKYNMLLKLKRGEKEEKFKVEVHKNHEG 222

Query: 181 AWTLKDLQQHH 213
           A  L   +QHH
Sbjct: 223 ALHLNHAEQHH 233


>sp|Q8LC76|CYT7_ARATH Cysteine proteinase inhibitor 7 OS=Arabidopsis
           thaliana GN=CYS7 PE=2 SV=2
          Length = 232

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 27/61 (44%), Positives = 43/61 (70%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+KS+Q +SNSL PY+L +++ A A+V  E  KF +L K++RG+K E+F  EV++   G 
Sbjct: 171 AMKSLQQKSNSLFPYKLIDIILARAKVVEERVKFELLLKLERGNKLEKFMVEVMKDQTGK 230

Query: 184 W 186
           +
Sbjct: 231 Y 231


>sp|P45920|YQBD_BACSU Uncharacterized protein yqbD OS=Bacillus
           subtilis GN=yqbD PE=4 SV=1
          Length = 322

 Score = 33.1 bits (74), Expect = 0.45
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +3

Query: 126 ERIKRRTVQG*GFADSGRSLDTQGSPTTSLKTSNIILYNVWKHLSCLKQGSTYEE 290
           E+IK+  + G   A +  +++ Q  P +  KT    L+N+ K+    KQ  +YEE
Sbjct: 136 EQIKKGEITGYSMAGTAETIEKQEKPVSQEKTDEKGLFNLLKNFFVGKQQQSYEE 190


>sp|P16589|ITRP_HALRO Trypsin inhibitor OS=Halocynthia roretzi PE=1
           SV=1
          Length = 55

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 12/27 (44%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
 Frame = -2

Query: 152 LNCSSFDPLCTLNKML-NLVCSLVTSA 75
           ++C+ F+PLC  NKML +L+C+++  A
Sbjct: 3   MDCTEFNPLCRCNKMLGDLICAVIGDA 29


>sp|O35544|EAA4_MOUSE Excitatory amino acid transporter 4 OS=Mus
           musculus GN=Slc1a6 PE=2 SV=1
          Length = 561

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = +3

Query: 105 QHLVQGAERIKRRTVQG*GFADSGRSLDTQGSPTTSLKTSNIILYNVWKHLSCLKQGSTY 284
           Q   Q + R+  RT+      D+G  L    SPT+S++    IL NV + L  L++  ++
Sbjct: 194 QFKTQYSTRVVTRTIVR---TDNGSELGASMSPTSSVENETSILENVTRALGTLQEVISF 250

Query: 285 EE 290
           EE
Sbjct: 251 EE 252


>sp|Q8G3Y5|IF2_BIFLO Translation initiation factor IF-2
            OS=Bifidobacterium longum GN=infB PE=3 SV=1
          Length = 954

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = +1

Query: 4    ALKSVQARSNSLVPYELKEVVTAHAEVTN--EHTKFNIL--FKVQRGSKEEQFKAEVLRT 171
            A++ ++A    ++  E +EVVT+H+E+      +KF  +    VQ G  +   K  +LR 
Sbjct: 839  AIEDIEASLKGMLKPEYEEVVTSHSEIREIFRSSKFGNIAGVMVQDGEVKRGTKCRILRN 898

Query: 172  VVGAWTLKDLQ 204
              G  T+ DL+
Sbjct: 899  --GVATVNDLE 907


>sp|A1A0A2|IF2_BIFAA Translation initiation factor IF-2
            OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM
            20083) GN=infB PE=3 SV=1
          Length = 931

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
 Frame = +1

Query: 1    EALKSVQARSNSLVPYELKEVVTAHAEVTN--EHTKFNIL--FKVQRGSKEEQFKAEVLR 168
            +A++ ++A    ++  E +EVVT+H+E+      +KF  +    VQ G  +   K  +LR
Sbjct: 815  KAIEDIEASLKGMLKPEYEEVVTSHSEIREIFRSSKFGNIAGVMVQDGEVKRGTKCRILR 874

Query: 169  TVVGAWTLKDLQ 204
               G  T+ DL+
Sbjct: 875  N--GIATVNDLE 884


>sp|Q5KIA9|SET1_CRYNE Histone-lysine N-methyltransferase, H3
           lysine-4 specific OS=Cryptococcus neoformans GN=SET1
           PE=3 SV=1
          Length = 1469

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +2

Query: 80  RSLMNIPSSTSCSRCREDQKKNSSRLRFCGQW*EPGHSRISNNITENKQHNSI*CVEAPV 259
           RS +++ SS+S S       +N   LR+ G   + G   +SN + EN    S   +  P 
Sbjct: 248 RSPVSVSSSSSSSARSPPPVQNREPLRYNGSQSKNGEKELSNGLLENSISRSGVSIAVPR 307

Query: 260 VLKTR 274
            L+T+
Sbjct: 308 KLETK 312
tr_hit_id Q84LB7
Definition tr|Q84LB7|Q84LB7_MALDO Cysteine protease inhibitor cystatin (Fragment) OS=Malus domestica
Align length 70
Score (bit) 87.4
E-value 3.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961475|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_D18, 5'
         (330 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q84LB7|Q84LB7_MALDO Cysteine protease inhibitor cystatin (Fra...    87   3e-16
tr|Q1L0Q7|Q1L0Q7_BOEDR At3g12490-like protein OS=Boechera drummo...    84   5e-15
tr|B7F4W8|B7F4W8_ORYSJ cDNA clone:001-200-C04, full insert seque...    83   6e-15
tr|A2ZRN1|A2ZRN1_ORYSJ Putative uncharacterized protein OS=Oryza...    83   6e-15
tr|B0YGH3|B0YGH3_CAKMA Proteinase inhibitor OS=Cakile maritima G...    81   3e-14
tr|Q8VYX5|Q8VYX5_BRAOL Cysteine protease inhibitor CPI-1 OS=Bras...    80   7e-14
tr|A0T2P2|A0T2P2_BRACM Cysteine proteinase inhibitor OS=Brassica...    80   7e-14
tr|Q1XHC6|Q1XHC6_WHEAT Multidomain cystatin OS=Triticum aestivum...    79   9e-14
tr|B5ACE0|B5ACE0_WHEAT Cystatin (Fragment) OS=Triticum aestivum ...    79   9e-14
tr|O04720|O04720_SOYBN Cysteine proteinase inhibitor OS=Glycine ...    79   1e-13
tr|Q4GZT8|Q4GZT8_FRAAN Fa-CPI1 protein (Cystatin CPI-1) OS=Fraga...    78   2e-13
tr|Q39270|Q39270_BRACM Cysteine proteinase inhibitor OS=Brassica...    78   3e-13
tr|Q1ENE9|Q1ENE9_HORVU Cystatin Hv-CPI4 OS=Hordeum vulgare GN=ic...    77   4e-13
tr|Q4FZ52|Q4FZ52_MAIZE Putative cystatin OS=Zea mays GN=cc4 PE=2...    77   6e-13
tr|Q39268|Q39268_BRACM Cysteine proteinase inhibitor OS=Brassica...    77   6e-13
tr|B6T883|B6T883_MAIZE Multidomain cystatin OS=Zea mays PE=2 SV=1      77   6e-13
tr|B4FV48|B4FV48_MAIZE Multidomain cystatin OS=Zea mays PE=2 SV=1      77   6e-13
tr|Q4A1J7|Q4A1J7_MAIZE Putative cystatin (Fragment) OS=Zea mays ...    76   1e-12
tr|B3TLW7|B3TLW7_ELAGV Cysteine proteinase inhibitor OS=Elaeis g...    74   5e-12
tr|Q3HVL8|Q3HVL8_SOLTU Cystatin-like protein OS=Solanum tuberosu...    72   1e-11
tr|A9P9T5|A9P9T5_POPTR Putative uncharacterized protein OS=Popul...    72   1e-11
tr|Q9AUC9|Q9AUC9_SESIN Cystatin OS=Sesamum indicum PE=2 SV=1           71   3e-11
tr|Q8L5J8|Q8L5J8_COLES Cysteine proteinase inhibitor OS=Colocasi...    70   5e-11
tr|A9TIJ1|A9TIJ1_PHYPA Predicted protein OS=Physcomitrella paten...    69   9e-11
tr|Q5Y7Z8|Q5Y7Z8_PETHY Cysteine proteinase inhibitor OS=Petunia ...    69   2e-10
tr|Q43635|Q43635_RICCO Cysteine proteinase inhibitor OS=Ricinus ...    68   3e-10
tr|Q9ZSC2|Q9ZSC2_IPOBA Cysteine proteinase inhibitor OS=Ipomoea ...    67   6e-10
tr|Q9M537|Q9M537_IPOBA Cysteine protease inhibitor OS=Ipomoea ba...    67   6e-10
tr|A9SCX0|A9SCX0_PHYPA Predicted protein (Fragment) OS=Physcomit...    65   2e-09
tr|A9TE26|A9TE26_PHYPA Predicted protein OS=Physcomitrella paten...    65   2e-09

>tr|Q84LB7|Q84LB7_MALDO Cysteine protease inhibitor cystatin
           (Fragment) OS=Malus domestica PE=2 SV=1
          Length = 246

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 42/70 (60%), Positives = 55/70 (78%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+KS+Q RSNSL+PYEL+EVV A AEV  EH KFN+L KV+RGSKEE+FKAEV + + G 
Sbjct: 176 AVKSLQQRSNSLLPYELQEVVHAQAEVAEEHAKFNMLLKVKRGSKEEKFKAEVHKNMEGT 235

Query: 184 WTLKDLQQHH 213
           ++L  ++  H
Sbjct: 236 FSLNQMEADH 245


>tr|Q1L0Q7|Q1L0Q7_BOEDR At3g12490-like protein OS=Boechera
           drummondii PE=4 SV=1
          Length = 231

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 41/70 (58%), Positives = 53/70 (75%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+K++Q RSNSL PYEL+EVV A+AEVT E  KFN+L K++RG KEE+FK EV +   GA
Sbjct: 161 AVKTIQQRSNSLFPYELQEVVHANAEVTGETAKFNMLLKLKRGEKEEKFKVEVHKNHEGA 220

Query: 184 WTLKDLQQHH 213
             L  ++QHH
Sbjct: 221 LHLNHMEQHH 230


>tr|B7F4W8|B7F4W8_ORYSJ cDNA clone:001-200-C04, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 250

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 40/70 (57%), Positives = 53/70 (75%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+KS+Q RSNSL PYEL E+V A AEV  +  KF+IL K++RG+KEE+FKAEV + + GA
Sbjct: 175 AVKSIQQRSNSLFPYELLEIVRAKAEVVEDFAKFDILMKLKRGNKEEKFKAEVHKNLEGA 234

Query: 184 WTLKDLQQHH 213
           + L  +QQ H
Sbjct: 235 FVLNQMQQEH 244


>tr|A2ZRN1|A2ZRN1_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001203 PE=4 SV=1
          Length = 226

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 40/70 (57%), Positives = 53/70 (75%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+KS+Q RSNSL PYEL E+V A AEV  +  KF+IL K++RG+KEE+FKAEV + + GA
Sbjct: 151 AVKSIQQRSNSLFPYELLEIVRAKAEVVEDFAKFDILMKLKRGNKEEKFKAEVHKNLEGA 210

Query: 184 WTLKDLQQHH 213
           + L  +QQ H
Sbjct: 211 FVLNQMQQEH 220


>tr|B0YGH3|B0YGH3_CAKMA Proteinase inhibitor OS=Cakile maritima
           GN=CMC1 PE=2 SV=1
          Length = 202

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 40/70 (57%), Positives = 52/70 (74%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+K++Q RSNSL PYEL+EVV A+AEVT E  KFN+L K++RG KEE+FK EV +   G 
Sbjct: 132 AVKTLQQRSNSLFPYELQEVVHANAEVTGEAAKFNMLLKLKRGDKEEKFKVEVHKNHEGV 191

Query: 184 WTLKDLQQHH 213
             L  ++QHH
Sbjct: 192 LHLNHMKQHH 201


>tr|Q8VYX5|Q8VYX5_BRAOL Cysteine protease inhibitor CPI-1
           OS=Brassica oleracea GN=CPI-1 PE=2 SV=1
          Length = 207

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 38/70 (54%), Positives = 52/70 (74%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+K++Q RSNSL PYEL+EVV A+AEVT E  K+N++ K++RG KEE+FK EV +   G 
Sbjct: 137 AVKTIQQRSNSLFPYELQEVVHANAEVTGEAAKYNMVLKLKRGEKEEKFKVEVHKNHEGV 196

Query: 184 WTLKDLQQHH 213
             L  ++QHH
Sbjct: 197 LHLNHMEQHH 206


>tr|A0T2P2|A0T2P2_BRACM Cysteine proteinase inhibitor OS=Brassica
           campestris PE=2 SV=1
          Length = 202

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 38/70 (54%), Positives = 52/70 (74%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+K++Q RSNSL PYEL+EVV A+AEVT E  K+N++ K++RG KEE+FK EV +   G 
Sbjct: 132 AVKTIQQRSNSLFPYELQEVVHANAEVTGEAAKYNMVLKLKRGDKEEKFKVEVHKNHQGV 191

Query: 184 WTLKDLQQHH 213
             L  ++QHH
Sbjct: 192 LHLNHMEQHH 201


>tr|Q1XHC6|Q1XHC6_WHEAT Multidomain cystatin OS=Triticum aestivum
           GN=TaMDC1 PE=2 SV=1
          Length = 243

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 38/70 (54%), Positives = 52/70 (74%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+KS+Q RSNSL+PYEL E+V A AEV  +  KF+IL K++RG+KEE+ KAEV + + GA
Sbjct: 168 AVKSIQQRSNSLLPYELVEIVRAKAEVVEDFAKFDILMKLKRGTKEEKMKAEVHKNLEGA 227

Query: 184 WTLKDLQQHH 213
           + L  +Q  H
Sbjct: 228 FVLNQMQPEH 237


>tr|B5ACE0|B5ACE0_WHEAT Cystatin (Fragment) OS=Triticum aestivum
           PE=2 SV=1
          Length = 243

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 38/70 (54%), Positives = 52/70 (74%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+KS+Q RSNSL+PYEL E+V A AEV  +  KF+IL K++RG+KEE+ KAEV + + GA
Sbjct: 168 AVKSIQQRSNSLLPYELVEIVRAKAEVVEDFAKFDILMKLKRGTKEEKMKAEVHKNLEGA 227

Query: 184 WTLKDLQQHH 213
           + L  +Q  H
Sbjct: 228 FVLNQMQPEH 237


>tr|O04720|O04720_SOYBN Cysteine proteinase inhibitor OS=Glycine max
           PE=2 SV=1
          Length = 245

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 38/70 (54%), Positives = 50/70 (71%)
 Frame = +1

Query: 4   ALKSVQARSNSLVPYELKEVVTAHAEVTNEHTKFNILFKVQRGSKEEQFKAEVLRTVVGA 183
           A+K++Q RSNSLVPYEL EV  A AEV ++  KFN+L KV+RG KEE+FK EV +   G 
Sbjct: 175 AIKTIQQRSNSLVPYELHEVADAKAEVIDDFAKFNLLLKVKRGQKEEKFKVEVHKNNQGG 234

Query: 184 WTLKDLQQHH 213
           + L  ++Q H
Sbjct: 235 FHLNQMEQDH 244