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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961484
Clone id TST39A01NGRL0010_E03
Library
Length 647
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_E03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTAGACTCTTTCAGCGCCGGGCAGAGGAGGTGAAGGCACGCTCTAACAACGTGAAGCCAT
GGCGCGCGGTCTCAAGAAACATCTGAAACGTCTCAATGCCCCGAGGCACTGGATGCTTGA
CAAGCTCGGTGGTGCCTTTGCGCCCAAGCCCTCTGCCGGACCCCATAAGACCAGGGAATG
TCTGCCGATGGTTGTCTTGTTGAGGAATCGGCTGAAGTATGCCTTGACCTATCGTGAAGT
GGTTGCCATTGTGATGCAGCGACTCATCTCTGTGGATGGGAAAGTAAGGACGGACAAGTG
TTACCCTGCTGGGTTTATGGATGTTGTGTCCATAGCAAAAACCGGAGAGAACTTCCGGTT
GCTTTATGATAGCAAAGGAAGATTCACCTTGCACTCCATAAGCCTTGAAGAGGCTAAGTA
CAAGCTATGCAAGGTCCGAGCTGCCTGCTGCGGCGAGAAGGGGATTCCCTACATCACTAC
ATTTGATGGGCGCACCATTCGCTATCCAGATCCCCTTATCAAGGCCAATGACACCATTAA
AATTGAAATTGAGACTGGAAAGGTTGTAGAGTTCATCAAGTTTGACATTGGCAACATTGT
TATGGTTACTGGAGGTCGAAACAGAGGCAGAATTGGGATTCTCAAGC
■■Homology search results ■■ -
sp_hit_id Q8VYK6
Definition sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3 OS=Arabidopsis thaliana
Align length 196
Score (bit) 337.0
E-value 3.0e-92
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961484|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_E03, 5'
         (647 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3 OS=Arabidopsis t...   337   3e-92
sp|P46300|RS4_SOLTU 40S ribosomal protein S4 OS=Solanum tuberosu...   337   4e-92
sp|P49204|RS42_ARATH 40S ribosomal protein S4-2 OS=Arabidopsis t...   337   4e-92
sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1 OS=Arabidopsis t...   337   4e-92
sp|P46299|RS4_GOSHI 40S ribosomal protein S4 OS=Gossypium hirsut...   335   1e-91
sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa sub...   332   8e-91
sp|O22424|RS4_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=RPS4...   332   1e-90
sp|O81363|RS4_PRUAR 40S ribosomal protein S4 OS=Prunus armeniaca...   309   9e-84
sp|Q90YS0|RS4_ICTPU 40S ribosomal protein S4 OS=Ictalurus puncta...   298   2e-80
sp|P47961|RS4_CRIGR 40S ribosomal protein S4 OS=Cricetulus grise...   296   8e-80
sp|P79103|RS4_BOVIN 40S ribosomal protein S4 OS=Bos taurus GN=RP...   295   1e-79
sp|P62703|RS4X_RAT 40S ribosomal protein S4, X isoform OS=Rattus...   295   1e-79
sp|P62702|RS4X_MOUSE 40S ribosomal protein S4, X isoform OS=Mus ...   295   1e-79
sp|P62704|RS4X_MESAU 40S ribosomal protein S4, X isoform OS=Meso...   295   1e-79
sp|Q76MY1|RS4X_MACFU 40S ribosomal protein S4, X isoform OS=Maca...   295   1e-79
sp|P62701|RS4X_HUMAN 40S ribosomal protein S4, X isoform OS=Homo...   295   1e-79
sp|P62705|RS4X_FELCA 40S ribosomal protein S4, X isoform OS=Feli...   295   1e-79
sp|Q76N24|RS4X_CERAE 40S ribosomal protein S4, X isoform OS=Cerc...   295   1e-79
sp|Q6PBC4|RS4_XENTR 40S ribosomal protein S4 OS=Xenopus tropical...   295   2e-79
sp|P49401|RS4_XENLA 40S ribosomal protein S4 OS=Xenopus laevis G...   294   2e-79
sp|P47836|RS4_CHICK 40S ribosomal protein S4 OS=Gallus gallus GN...   294   2e-79
sp|Q642H9|RS4X_DANRE 40S ribosomal protein S4, X isoform OS=Dani...   293   5e-79
sp|Q4PMB3|RS4_IXOSC 40S ribosomal protein S4 OS=Ixodes scapulari...   293   7e-79
sp|Q5UAP0|RS4_BOMMO 40S ribosomal protein S4 OS=Bombyx mori GN=R...   291   2e-78
sp|O62739|RS4Y1_MONDO 40S ribosomal protein S4, Y isoform 1 OS=M...   291   3e-78
sp|O62738|RS4X_MONDO 40S ribosomal protein S4, X isoform OS=Mono...   291   3e-78
sp|Q95V34|RS4_SPOFR 40S ribosomal protein S4 OS=Spodoptera frugi...   290   6e-78
sp|Q9USW5|RS4B_SCHPO 40S ribosomal protein S4-B OS=Schizosacchar...   288   1e-77
sp|P87158|RS4A_SCHPO 40S ribosomal protein S4-A OS=Schizosacchar...   288   1e-77
sp|Q4GXU6|RS4_CARGR 40S ribosomal protein S4 OS=Carabus granulat...   288   2e-77

>sp|Q8VYK6|RS43_ARATH 40S ribosomal protein S4-3 OS=Arabidopsis
           thaliana GN=RPS4D PE=2 SV=2
          Length = 262

 Score =  337 bits (864), Expect = 3e-92
 Identities = 156/196 (79%), Positives = 181/196 (92%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V++I+MQR I VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIK NDTIK+++E  K+VEFIKFD+GN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGR+G++K
Sbjct: 181 VMVTGGRNRGRVGVIK 196


>sp|P46300|RS4_SOLTU 40S ribosomal protein S4 OS=Solanum tuberosum
           GN=RPS4 PE=2 SV=1
          Length = 264

 Score =  337 bits (863), Expect = 4e-92
 Identities = 153/196 (78%), Positives = 183/196 (93%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V++I+MQR + VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHS+  EE+K
Sbjct: 61  VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIKANDTIK+++E+ K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGR+G++K
Sbjct: 181 VMVTGGRNRGRVGVIK 196


>sp|P49204|RS42_ARATH 40S ribosomal protein S4-2 OS=Arabidopsis
           thaliana GN=RPS4B PE=2 SV=4
          Length = 262

 Score =  337 bits (863), Expect = 4e-92
 Identities = 156/196 (79%), Positives = 181/196 (92%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V++I+MQR I VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIK NDTIK+++E  K+VEFIKFD+GN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGR+G++K
Sbjct: 181 VMVTGGRNRGRVGVIK 196


>sp|Q93VH9|RS41_ARATH 40S ribosomal protein S4-1 OS=Arabidopsis
           thaliana GN=RPS4A PE=2 SV=1
          Length = 261

 Score =  337 bits (863), Expect = 4e-92
 Identities = 156/196 (79%), Positives = 181/196 (92%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+V+++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V++I+MQR I VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIK NDTIK+++E  K+VEFIKFD+GN+
Sbjct: 121 FKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGR+G++K
Sbjct: 181 VMVTGGRNRGRVGVIK 196


>sp|P46299|RS4_GOSHI 40S ribosomal protein S4 OS=Gossypium hirsutum
           GN=RPS4 PE=2 SV=1
          Length = 262

 Score =  335 bits (859), Expect = 1e-91
 Identities = 153/196 (78%), Positives = 183/196 (93%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS+GPHK+RECLP++++LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V+AI+MQR + VDGKVRTDK YPAGFMDVVSI KT E+FRLLYD+KGRF LH+I+ +E K
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIKANDTIK+++E+ K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGR+G++K
Sbjct: 181 VMVTGGRNRGRVGVIK 196


>sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa subsp.
           japonica GN=RPS4 PE=2 SV=3
          Length = 265

 Score =  332 bits (852), Expect = 8e-91
 Identities = 150/196 (76%), Positives = 182/196 (92%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+++++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V++I+MQR + VDGKVRTDK YPAGFMDV+SI KTGEN+RLLYD+KGRF L S+  E+AK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDP+IKANDTIKI++ET K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRN GR+G++K
Sbjct: 181 VMVTGGRNTGRVGVIK 196


>sp|O22424|RS4_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=RPS4
           PE=2 SV=1
          Length = 265

 Score =  332 bits (851), Expect = 1e-90
 Identities = 151/196 (77%), Positives = 181/196 (92%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP+++++RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V++I+MQR + VDGKVRTDK YPAGFMDV+SI KT EN+RLLYD+KGRF LH I  E+AK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G+KGIPY+ T+DGRTIRYPDPLIKANDTIKI++ET K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRN GR+G++K
Sbjct: 181 VMVTGGRNTGRVGVIK 196


>sp|O81363|RS4_PRUAR 40S ribosomal protein S4 OS=Prunus armeniaca
           GN=RPS4 PE=2 SV=1
          Length = 261

 Score =  309 bits (791), Expect = 9e-84
 Identities = 146/196 (74%), Positives = 173/196 (88%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK+RECLP++++LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           VV+I+MQR I VDGK+     +     DVVSI KT ENFRLLYD+KGRF LHSI  EE+K
Sbjct: 61  VVSILMQRHILVDGKIH----FCIRLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESK 116

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G+KGIPYI T+DGRTIRYPDPLIKANDTIK+++ET K+ +FIKFD+GN+
Sbjct: 117 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNV 176

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGR+G++K
Sbjct: 177 VMVTGGRNRGRVGVIK 192


>sp|Q90YS0|RS4_ICTPU 40S ribosomal protein S4 OS=Ictalurus punctatus
           GN=rps4 PE=2 SV=3
          Length = 263

 Score =  298 bits (763), Expect = 2e-80
 Identities = 140/195 (71%), Positives = 162/195 (83%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARG KKHLKR+ AP+HWMLDKL G FAP+PS GPHK RECLP+++ LRNRLKYALT  E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V  I MQR I VDGKVRTD  YPAGFMDV+SI KTGENFRL+YD KGRFT+H I+ EEAK
Sbjct: 61  VKKICMQRFIKVDGKVRTDITYPAGFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKV+    G KGIP++ T D RTIRYPDP+IKANDT++I++ETGK+ EFIKFD GN+
Sbjct: 121 YKLCKVKKILIGTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNL 180

Query: 599 VMVTGGRNRGRIGIL 643
            MVTGG N GRIG++
Sbjct: 181 CMVTGGANLGRIGVI 195


>sp|P47961|RS4_CRIGR 40S ribosomal protein S4 OS=Cricetulus griseus
           GN=RPS4 PE=2 SV=2
          Length = 263

 Score =  296 bits (757), Expect = 8e-80
 Identities = 139/195 (71%), Positives = 161/195 (82%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARG KKHLKR+ AP+HWMLDKL G FAP+PS GPHK RECLP+++ LRNRLKYALT  E
Sbjct: 1   MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V  I MQR I +DGKVRTD  YPAGFMDV+SI KTGENFRL+YD+KGRF +H I+ EEAK
Sbjct: 61  VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKVR    G KGIP++ T D RTIRYPDPLIK NDTI+I++ETGK+ +FIKFD GN+
Sbjct: 121 YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180

Query: 599 VMVTGGRNRGRIGIL 643
            MVTGG N GRIG++
Sbjct: 181 CMVTGGANLGRIGVI 195
tr_hit_id A9S0Q0
Definition tr|A9S0Q0|A9S0Q0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 196
Score (bit) 367.0
E-value 1.0e-100
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961484|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_E03, 5'
         (647 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S0Q0|A9S0Q0_PHYPA Predicted protein OS=Physcomitrella paten...   367   e-100
tr|A9TPQ8|A9TPQ8_PHYPA Predicted protein OS=Physcomitrella paten...   365   1e-99
tr|A9RZU4|A9RZU4_PHYPA Predicted protein OS=Physcomitrella paten...   365   1e-99
tr|A9RCK9|A9RCK9_PHYPA Predicted protein OS=Physcomitrella paten...   365   1e-99
tr|A9U397|A9U397_PHYPA Predicted protein OS=Physcomitrella paten...   363   4e-99
tr|A9SIE0|A9SIE0_PHYPA Predicted protein OS=Physcomitrella paten...   362   8e-99
tr|A9NKK9|A9NKK9_PICSI Putative uncharacterized protein OS=Picea...   355   1e-96
tr|A9NNW1|A9NNW1_PICSI Putative uncharacterized protein OS=Picea...   355   2e-96
tr|B3TM21|B3TM21_ELAGV 40S ribosomal protein S4 OS=Elaeis guinee...   338   2e-91
tr|B3TM23|B3TM23_ELAGV 40S ribosomal protein S4 OS=Elaeis guinee...   338   2e-91
tr|A3B3A9|A3B3A9_ORYSJ Putative uncharacterized protein OS=Oryza...   337   4e-91
tr|Q2XPX5|Q2XPX5_SOLTU 40S ribosomal protein S4-like protein OS=...   337   5e-91
tr|Q0DIR7|Q0DIR7_ORYSJ Os05g0368300 protein OS=Oryza sativa subs...   336   6e-91
tr|A2Y3W4|A2Y3W4_ORYSI Putative uncharacterized protein OS=Oryza...   335   1e-90
tr|Q8LJW0|Q8LJW0_SOYBN 40S ribosomal S4 protein OS=Glycine max P...   335   1e-90
tr|Q5ZBX1|Q5ZBX1_ORYSJ cDNA clone:001-040-C06, full insert seque...   333   5e-90
tr|A2WPV4|A2WPV4_ORYSI Putative uncharacterized protein OS=Oryza...   333   5e-90
tr|Q0E4Q0|Q0E4Q0_ORYSJ 40S ribosomal protein S4 OS=Oryza sativa ...   332   9e-90
tr|A2WZV1|A2WZV1_ORYSI Putative uncharacterized protein OS=Oryza...   332   9e-90
tr|Q6L5M3|Q6L5M3_BROIN Ribosomal protein OS=Bromus inermis GN=Bi...   332   1e-89
tr|B4FMI5|B4FMI5_MAIZE 40S ribosomal protein S4 OS=Zea mays PE=2...   332   1e-89
tr|Q401B8|Q401B8_PANGI Ribosomal protein S4 OS=Panax ginseng PE=...   332   2e-89
tr|B7FL29|B7FL29_MEDTR Putative uncharacterized protein OS=Medic...   331   3e-89
tr|A9P7U7|A9P7U7_POPTR Putative uncharacterized protein OS=Popul...   330   6e-89
tr|Q6QU83|Q6QU83_MAIZE Ribosomal protein S4 OS=Zea mays GN=rps4 ...   329   8e-89
tr|A9PD40|A9PD40_POPTR Putative uncharacterized protein OS=Popul...   328   1e-88
tr|O22453|O22453_MAIZE 40S ribosomal protein S4 OS=Zea mays GN=r...   328   2e-88
tr|A8UEI0|A8UEI0_AREMA Ribosomal protein rps4 (Fragment) OS=Aren...   303   8e-81
tr|Q6L588|Q6L588_ORYSJ Putative 40S ribosomal protein S4 OS=Oryz...   300   7e-80
tr|Q2V395|Q2V395_ARATH Uncharacterized protein At5g07090.2 OS=Ar...   299   1e-79

>tr|A9S0Q0|A9S0Q0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_180098 PE=4 SV=1
          Length = 263

 Score =  367 bits (942), Expect = e-100
 Identities = 175/196 (89%), Positives = 189/196 (96%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH+IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKVR+A  G+KG+PYITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGRIG+++
Sbjct: 181 VMVTGGRNRGRIGVIQ 196


>tr|A9TPQ8|A9TPQ8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_197071 PE=4 SV=1
          Length = 263

 Score =  365 bits (937), Expect = 1e-99
 Identities = 174/196 (88%), Positives = 188/196 (95%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKVR+A  G+KG+PYITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRSAQFGDKGVPYITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGRIG+++
Sbjct: 181 VMVTGGRNRGRIGVIQ 196


>tr|A9RZU4|A9RZU4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_207291 PE=4 SV=1
          Length = 263

 Score =  365 bits (937), Expect = 1e-99
 Identities = 174/196 (88%), Positives = 189/196 (96%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH+IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKVR+A  G+KG+P+ITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGRIG+++
Sbjct: 181 VMVTGGRNRGRIGVIQ 196


>tr|A9RCK9|A9RCK9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64135 PE=4 SV=1
          Length = 263

 Score =  365 bits (937), Expect = 1e-99
 Identities = 174/196 (88%), Positives = 189/196 (96%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH+IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKVR+A  G+KG+P+ITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGRIG+++
Sbjct: 181 VMVTGGRNRGRIGVIQ 196


>tr|A9U397|A9U397_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_227948 PE=4 SV=1
          Length = 263

 Score =  363 bits (933), Expect = 4e-99
 Identities = 173/195 (88%), Positives = 187/195 (95%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKVRAA  G+KG+P++TTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFDIGNI
Sbjct: 121 YKLCKVRAAQFGDKGVPHVTTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNI 180

Query: 599 VMVTGGRNRGRIGIL 643
           VMVTGGRNRGRIG++
Sbjct: 181 VMVTGGRNRGRIGVI 195


>tr|A9SIE0|A9SIE0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_185262 PE=4 SV=1
          Length = 308

 Score =  362 bits (930), Expect = 8e-99
 Identities = 172/195 (88%), Positives = 187/195 (95%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS GPHK RECLP+VV+LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           VVAIVMQRLIS+DGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRFTLH IS EEAK
Sbjct: 61  VVAIVMQRLISIDGKVRTDKCYPAGFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKVR+A  G+KG+P+ITTFDGRTIRYPDPLIKANDT+KI +ETGKVVEFIKFD+GNI
Sbjct: 121 YKLCKVRSAQFGDKGVPHITTFDGRTIRYPDPLIKANDTVKINLETGKVVEFIKFDVGNI 180

Query: 599 VMVTGGRNRGRIGIL 643
           VMVTGGRNRGRIG++
Sbjct: 181 VMVTGGRNRGRIGVI 195


>tr|A9NKK9|A9NKK9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 263

 Score =  355 bits (912), Expect = 1e-96
 Identities = 167/196 (85%), Positives = 185/196 (94%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VVL+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V+AIVMQRLISVDGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VIAIVMQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKVR+   G+KGIPY+ T+DGRTIRYPDPL+KANDTIKI++ETGK+ EFIKFD+GN+
Sbjct: 121 YKLCKVRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKIDLETGKIKEFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGR+G++K
Sbjct: 181 VMVTGGRNRGRVGVIK 196


>tr|A9NNW1|A9NNW1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 263

 Score =  355 bits (910), Expect = 2e-96
 Identities = 165/196 (84%), Positives = 185/196 (94%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPS GPHK RECLP+VVL+RNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V+AIVMQRLISVDGKVRTDKCYPAGFMDV+SIAKT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VIAIVMQRLISVDGKVRTDKCYPAGFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           YKLCKVR+   G+KGIPY+ T+DGRTIRYPDPL+KANDTIK+++ETGK+ EFIKFD+GN+
Sbjct: 121 YKLCKVRSVQFGDKGIPYLNTYDGRTIRYPDPLVKANDTIKVDLETGKIKEFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           +MVTGGRNRGR+G++K
Sbjct: 181 IMVTGGRNRGRVGVIK 196


>tr|B3TM21|B3TM21_ELAGV 40S ribosomal protein S4 OS=Elaeis
           guineensis var. tenera PE=2 SV=1
          Length = 265

 Score =  338 bits (867), Expect = 2e-91
 Identities = 156/196 (79%), Positives = 181/196 (92%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK RECLP++++LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V+AI+MQR + VDGKVRTDK YP+GFMDVVSI KT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VIAILMQRHVMVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G+KGIPY+ TFDGRTIRYPDPLIKANDTIK+++E  K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLEANKIVDFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGR+G++K
Sbjct: 181 VMVTGGRNRGRVGVIK 196


>tr|B3TM23|B3TM23_ELAGV 40S ribosomal protein S4 OS=Elaeis
           guineensis var. tenera PE=2 SV=1
          Length = 265

 Score =  338 bits (866), Expect = 2e-91
 Identities = 157/196 (80%), Positives = 181/196 (92%)
 Frame = +2

Query: 59  MARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSAGPHKTRECLPMVVLLRNRLKYALTYRE 238
           MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPS+GPHK RECLP++++LRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 60

Query: 239 VVAIVMQRLISVDGKVRTDKCYPAGFMDVVSIAKTGENFRLLYDSKGRFTLHSISLEEAK 418
           V+AI+MQR + VDGKVRTDK YPAGFMDVVSI KT ENFRLLYD+KGRF LHSI  EEAK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 419 YKLCKVRAACCGEKGIPYITTFDGRTIRYPDPLIKANDTIKIEIETGKVVEFIKFDIGNI 598
           +KLCKVR+   G KGIPY+ T+DGRTIRYPDPLIKANDTIK+++ET K+V+FIKFD+GN+
Sbjct: 121 FKLCKVRSVQFGHKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETYKIVDFIKFDVGNV 180

Query: 599 VMVTGGRNRGRIGILK 646
           VMVTGGRNRGR+G++K
Sbjct: 181 VMVTGGRNRGRVGVIK 196