DK961498 |
Clone id |
TST39A01NGRL0010_E18 |
Library |
TST39 |
Length |
678 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_E18. 5' end sequence. |
Accession |
DK961498 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL306Contig1 |
Sequence |
CAGTCTCTGGGTTCGAAGCTCTCGTCCGCATCCCTCCCCTTGAAGAAGCCCTGTGCGTGG GGTCAAAAGAGCAGGAGAGGACTCTGTATGGAAGTGAATGCATCTCTTATTGCCGATGAT CTGGATGTAGTGCCTATGACGAGTAAGGACCCTGTCGATCAGCAGCAAGGGGATTCCGTC CTCATGGGAATTGAGAGCGTAGAGGAGCAGTCACCCTTGGCCTCCTCTCCTGGTGGCTTC TCACCCGAATCTCCCTTCGCTTTTGATCTCAGCTCAATGGCAGCCTCTGGAGCTTCAAAT GAGGCCCAGGTGCTTGTGGCTTCTGTGTCCGACATGCCTCCCTCTGCACAGGATCAACAA TTCGCTGACCAAGCCATCAACGCAGCCATTGTGGGTGTAGCGGGTGCCTTCGCCATCACC AAAATTCTCACTGTGGATCATGACTACTGGCATGGTTGGACAATCATTGAAATATTACGG TATGCACCCCTCCACAATTGGAGTGCATATGAAGAAGCCTTGAAGACCAACCCTATTCTG GCAAAAATGATGATCAGTGGTTGTGTGTATGCCATTGGTGATTGGATTGCACAGTGCTAT GAAGGGAAGCCTATCTTGGAGATAAGCAGAAAGAGAATGATTCGTTCTGGGTTGGTAGGC TTCTGTCTTCACGGTTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q68F62 |
Definition |
sp|Q68F62|MP17L_XENLA Mpv17-like protein OS=Xenopus laevis |
Align length |
52 |
Score (bit) |
35.8 |
E-value |
0.22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PIQ8 |
Definition |
tr|A9PIQ8|A9PIQ8_POPJC Putative uncharacterized protein OS=Populus jackii |
Align length |
192 |
Score (bit) |
176.0 |
E-value |
9.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961498|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_E18, 5' (678 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PIQ8|A9PIQ8_POPJC Putative uncharacterized protein OS=Popul... 176 9e-43 tr|Q9C933|Q9C933_ARATH Putative uncharacterized protein F14G24.1... 173 1e-41 tr|Q8LF31|Q8LF31_ARATH Putative uncharacterized protein OS=Arabi... 173 1e-41 tr|Q75IB3|Q75IB3_ORYSJ Os03g0583800 protein OS=Oryza sativa subs... 163 8e-39 tr|Q10HL5|Q10HL5_ORYSJ Peroxisomal membrane protein, putative, e... 163 8e-39 tr|Q10HL4|Q10HL4_ORYSJ Peroxisomal membrane protein, putative, e... 163 8e-39 tr|B8AL69|B8AL69_ORYSI Putative uncharacterized protein OS=Oryza... 163 8e-39 tr|A3AJX8|A3AJX8_ORYSJ Putative uncharacterized protein OS=Oryza... 163 8e-39 tr|B8LNA6|B8LNA6_PICSI Putative uncharacterized protein OS=Picea... 159 2e-37 tr|A7P1H6|A7P1H6_VITVI Chromosome chr19 scaffold_4, whole genome... 158 3e-37 tr|B6U032|B6U032_MAIZE Mpv17 / PMP22 family protein OS=Zea mays ... 157 6e-37 tr|B4FIN2|B4FIN2_MAIZE Putative uncharacterized protein OS=Zea m... 157 6e-37 tr|A7PXD7|A7PXD7_VITVI Chromosome chr12 scaffold_36, whole genom... 156 1e-36 tr|A9SHF9|A9SHF9_PHYPA Predicted protein (Fragment) OS=Physcomit... 154 4e-36 tr|B7FJI7|B7FJI7_MEDTR Putative uncharacterized protein OS=Medic... 152 2e-35 tr|Q9ZNU0|Q9ZNU0_ARATH Putative uncharacterized protein AT4g0341... 151 3e-35 tr|Q5XEV3|Q5XEV3_ARATH At4g03410 OS=Arabidopsis thaliana PE=2 SV=1 151 3e-35 tr|Q7Y1Z9|Q7Y1Z9_ARATH Putative uncharacterized protein At4g0341... 150 9e-35 tr|A9T601|A9T601_PHYPA Predicted protein OS=Physcomitrella paten... 147 5e-34 tr|Q69LX3|Q69LX3_ORYSJ Peroxisomal membrane protein-like OS=Oryz... 138 4e-31 tr|Q0J2Q8|Q0J2Q8_ORYSJ Os09g0315000 protein OS=Oryza sativa subs... 138 4e-31 tr|A3AJX4|A3AJX4_ORYSJ Putative uncharacterized protein OS=Oryza... 110 6e-23 tr|B7FPU8|B7FPU8_PHATR Predicted protein (Fragment) OS=Phaeodact... 74 7e-12 tr|B7G9T7|B7G9T7_PHATR Predicted protein (Fragment) OS=Phaeodact... 64 9e-09 tr|B8CE52|B8CE52_THAPS Predicted protein (Fragment) OS=Thalassio... 64 1e-08 tr|B8BTZ1|B8BTZ1_THAPS Predicted protein (Fragment) OS=Thalassio... 63 2e-08 tr|B7S4J2|B7S4J2_PHATR Predicted protein (Fragment) OS=Phaeodact... 47 0.001 tr|B7GCZ9|B7GCZ9_PHATR Predicted protein OS=Phaeodactylum tricor... 42 0.028 tr|B7G8P1|B7G8P1_PHATR Predicted protein OS=Phaeodactylum tricor... 42 0.036 tr|Q0IHG9|Q0IHG9_XENLA MGC154358 protein OS=Xenopus laevis GN=MG... 39 0.31
>tr|A9PIQ8|A9PIQ8_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 369
Score = 176 bits (447), Expect = 9e-43 Identities = 89/192 (46%), Positives = 117/192 (60%) Frame = +1
Query: 103 SLIADDLDVVPMTSKDPVDQQQGDSVLMGIESVEEQSPLXXXXXXXXXXXXXXXDLSSMA 282 S++ ++LDV+P+ S D VDQQ+G + + +E + SS + Sbjct: 53 SVVQEELDVIPVQSGDSVDQQEG-MLAIPVEREGTELAAQVSGFGGSDGQFSFEGFSSAS 111
Query: 283 ASGASNEAQVLVASVSDMPPSAQDQQFADQXXXXXXXXXXXXXXXTKILTVDHDYWHGWT 462 +SG E+ + ++ ++ D+ TK+LT+DH+YWHGWT Sbjct: 112 SSGIDGES---------IDRQSESERLIDRTINAMIVLGAGTYAITKLLTIDHNYWHGWT 162
Query: 463 IIEILRYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQCYEGKPILEISRKRMI 642 + EILRYAP HNWSAYEEALKTNP+LAKMMISG VY++GDWIAQCYEGKP+ E R RM Sbjct: 163 LFEILRYAPQHNWSAYEEALKTNPVLAKMMISGIVYSLGDWIAQCYEGKPLFEYDRTRMF 222
Query: 643 RSGLVGFCLHGS 678 RSGLVGF LHGS Sbjct: 223 RSGLVGFTLHGS 234
>tr|Q9C933|Q9C933_ARATH Putative uncharacterized protein F14G24.14 (At1g52870/F14G24_14) OS=Arabidopsis thaliana GN=At1g52870 PE=2 SV=1 Length = 366
Score = 173 bits (438), Expect = 1e-41 Identities = 88/207 (42%), Positives = 120/207 (57%), Gaps = 12/207 (5%) Frame = +1
Query: 94 VNASLIADDLDVVPMTSKDPVDQQQGDSVLMGIESVEEQSPLXXXXXXXXXXXXXXXDLS 273 V+ +LI D++D++P+ S+D D ++G V+M E+ + + + Sbjct: 40 VSCALIRDEIDLIPVQSRDRTDHEEGSVVVMSTETAVDGN-----------------ESV 82
Query: 274 SMAASGASNEAQVLVASVSDMPPSAQD------------QQFADQXXXXXXXXXXXXXXX 417 + S A++E Q+ + S D ++ D+ Sbjct: 83 VVGFSAATSEGQLSLEGFPSSSSSGADLGDEKRRENEEMEKMIDRTINATIVLAAGSYAI 142
Query: 418 TKILTVDHDYWHGWTIIEILRYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQC 597 TK+LT+DHDYWHGWT+ EILRYAP HNW AYEEALK NP+LAKM+ISG VY++GDWIAQC Sbjct: 143 TKLLTIDHDYWHGWTLFEILRYAPQHNWIAYEEALKQNPVLAKMVISGVVYSVGDWIAQC 202
Query: 598 YEGKPILEISRKRMIRSGLVGFCLHGS 678 YEGKP+ EI R R +RSGLVGF LHGS Sbjct: 203 YEGKPLFEIDRARTLRSGLVGFTLHGS 229
>tr|Q8LF31|Q8LF31_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 306
Score = 173 bits (438), Expect = 1e-41 Identities = 88/207 (42%), Positives = 120/207 (57%), Gaps = 12/207 (5%) Frame = +1
Query: 94 VNASLIADDLDVVPMTSKDPVDQQQGDSVLMGIESVEEQSPLXXXXXXXXXXXXXXXDLS 273 V+ +LI D++D++P+ S+D D ++G V+M E+ + + + Sbjct: 40 VSCALIRDEIDLIPVQSRDRTDHEEGSVVVMSTETAVDGN-----------------ESV 82
Query: 274 SMAASGASNEAQVLVASVSDMPPSAQD------------QQFADQXXXXXXXXXXXXXXX 417 + S A++E Q+ + S D ++ D+ Sbjct: 83 VVGFSAATSEGQLSLEGFPSSSSSGADLGDEKRRENEEMEKMIDRTINATIVLAAGSYAI 142
Query: 418 TKILTVDHDYWHGWTIIEILRYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQC 597 TK+LT+DHDYWHGWT+ EILRYAP HNW AYEEALK NP+LAKM+ISG VY++GDWIAQC Sbjct: 143 TKLLTIDHDYWHGWTLFEILRYAPQHNWIAYEEALKQNPVLAKMVISGVVYSVGDWIAQC 202
Query: 598 YEGKPILEISRKRMIRSGLVGFCLHGS 678 YEGKP+ EI R R +RSGLVGF LHGS Sbjct: 203 YEGKPLFEIDRARTLRSGLVGFTLHGS 229
>tr|Q75IB3|Q75IB3_ORYSJ Os03g0583800 protein OS=Oryza sativa subsp. japonica GN=OJ1785_A05.29 PE=2 SV=1 Length = 358
Score = 163 bits (413), Expect = 8e-39 Identities = 73/87 (83%), Positives = 77/87 (88%) Frame = +1
Query: 418 TKILTVDHDYWHGWTIIEILRYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQC 597 TK+LTVDHDYWHGWTI EILRY P HNWSAYEEALKTNP+LAKMMISG VY++GDWIAQC Sbjct: 140 TKLLTVDHDYWHGWTIFEILRYMPEHNWSAYEEALKTNPVLAKMMISGVVYSLGDWIAQC 199
Query: 598 YEGKPILEISRKRMIRSGLVGFCLHGS 678 YEGKPI E R RM RSGLVGF LHGS Sbjct: 200 YEGKPIFEFDRARMFRSGLVGFTLHGS 226
>tr|Q10HL5|Q10HL5_ORYSJ Peroxisomal membrane protein, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g38730 PE=4 SV=1 Length = 301
Score = 163 bits (413), Expect = 8e-39 Identities = 73/87 (83%), Positives = 77/87 (88%) Frame = +1
Query: 418 TKILTVDHDYWHGWTIIEILRYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQC 597 TK+LTVDHDYWHGWTI EILRY P HNWSAYEEALKTNP+LAKMMISG VY++GDWIAQC Sbjct: 140 TKLLTVDHDYWHGWTIFEILRYMPEHNWSAYEEALKTNPVLAKMMISGVVYSLGDWIAQC 199
Query: 598 YEGKPILEISRKRMIRSGLVGFCLHGS 678 YEGKPI E R RM RSGLVGF LHGS Sbjct: 200 YEGKPIFEFDRARMFRSGLVGFTLHGS 226
>tr|Q10HL4|Q10HL4_ORYSJ Peroxisomal membrane protein, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g38730 PE=4 SV=1 Length = 306
Score = 163 bits (413), Expect = 8e-39 Identities = 73/87 (83%), Positives = 77/87 (88%) Frame = +1
Query: 418 TKILTVDHDYWHGWTIIEILRYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQC 597 TK+LTVDHDYWHGWTI EILRY P HNWSAYEEALKTNP+LAKMMISG VY++GDWIAQC Sbjct: 140 TKLLTVDHDYWHGWTIFEILRYMPEHNWSAYEEALKTNPVLAKMMISGVVYSLGDWIAQC 199
Query: 598 YEGKPILEISRKRMIRSGLVGFCLHGS 678 YEGKPI E R RM RSGLVGF LHGS Sbjct: 200 YEGKPIFEFDRARMFRSGLVGFTLHGS 226
>tr|B8AL69|B8AL69_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12389 PE=4 SV=1 Length = 369
Score = 163 bits (413), Expect = 8e-39 Identities = 73/87 (83%), Positives = 77/87 (88%) Frame = +1
Query: 418 TKILTVDHDYWHGWTIIEILRYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQC 597 TK+LTVDHDYWHGWTI EILRY P HNWSAYEEALKTNP+LAKMMISG VY++GDWIAQC Sbjct: 137 TKLLTVDHDYWHGWTIFEILRYMPEHNWSAYEEALKTNPVLAKMMISGVVYSLGDWIAQC 196
Query: 598 YEGKPILEISRKRMIRSGLVGFCLHGS 678 YEGKPI E R RM RSGLVGF LHGS Sbjct: 197 YEGKPIFEFDRARMFRSGLVGFTLHGS 223
>tr|A3AJX8|A3AJX8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011100 PE=4 SV=1 Length = 332
Score = 163 bits (413), Expect = 8e-39 Identities = 73/87 (83%), Positives = 77/87 (88%) Frame = +1
Query: 418 TKILTVDHDYWHGWTIIEILRYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQC 597 TK+LTVDHDYWHGWTI EILRY P HNWSAYEEALKTNP+LAKMMISG VY++GDWIAQC Sbjct: 137 TKLLTVDHDYWHGWTIFEILRYMPEHNWSAYEEALKTNPVLAKMMISGVVYSLGDWIAQC 196
Query: 598 YEGKPILEISRKRMIRSGLVGFCLHGS 678 YEGKPI E R RM RSGLVGF LHGS Sbjct: 197 YEGKPIFEFDRARMFRSGLVGFTLHGS 223
>tr|B8LNA6|B8LNA6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 294
Score = 159 bits (402), Expect = 2e-37 Identities = 73/127 (57%), Positives = 94/127 (74%), Gaps = 2/127 (1%) Frame = +1
Query: 304 AQVLVASVSDMPPSAQDQQ--FADQXXXXXXXXXXXXXXXTKILTVDHDYWHGWTIIEIL 477 AQ+ + S S + + ++++ F D+ TK+LT+DHDYWHGWT+ EI+ Sbjct: 29 AQMQIGSGSQVSQADKEEEMKFIDRAINAAVVFAAGSFVVTKMLTIDHDYWHGWTLYEIV 88
Query: 478 RYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQCYEGKPILEISRKRMIRSGLV 657 RYAP+HNW+AYEEALKTNP+LAKM+ISG VY++GDWIAQCYEGK + E +R RM RSGLV Sbjct: 89 RYAPVHNWTAYEEALKTNPVLAKMVISGAVYSLGDWIAQCYEGKQLFEFNRIRMFRSGLV 148
Query: 658 GFCLHGS 678 GF LHGS Sbjct: 149 GFSLHGS 155
>tr|A7P1H6|A7P1H6_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027620001 PE=4 SV=1 Length = 291
Score = 158 bits (400), Expect = 3e-37 Identities = 69/87 (79%), Positives = 77/87 (88%) Frame = +1
Query: 418 TKILTVDHDYWHGWTIIEILRYAPLHNWSAYEEALKTNPILAKMMISGCVYAIGDWIAQC 597 TK+LT+D DYWHGWTI EILRYAP HNWSAYEEALKTNP+ AKM+ISG VY++GDWIAQC Sbjct: 62 TKLLTIDADYWHGWTIFEILRYAPQHNWSAYEEALKTNPVFAKMVISGVVYSLGDWIAQC 121
Query: 598 YEGKPILEISRKRMIRSGLVGFCLHGS 678 YEGKP+ E R RM+RSGLVGF LHGS Sbjct: 122 YEGKPLFEFDRARMLRSGLVGFTLHGS 148
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