DK961532
Clone id TST39A01NGRL0010_G05
Library
Length 646
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_G05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CCGTCTTTTGGATCGCAGCAACAACAACAGCTCTCTTTGGCCACTACGATCGCCACTCCA
ATTAGGCCTAGGCTCGGTATGTTTGACCTCCTTGTTCCACTTTGATCGTCGATCGTCTGT
TTTGTAAGCGGCTATGGCGTCCTCCCTCGTCGCCCGCTTGCCATCCTCGCCCTCGCCTGC
CTCTACATCCTCCGCATTTTTCCCCTTCCAACCCATTCCGCAAAGCTTACCTCTGCATAG
CCATGTCCGCCATCTCAGATTCTCCTGGTCTGTGAATGCATCTTTAGGGGATGACACCTC
CACTCAAATTGATGGCCCTGAGGCACCCTCTTCGTCATCATCTCCCGCCGACGCACCCTC
TCCATCCACATCTACCGTAGTCACATCCAGTAAGCAGCCTCAAACGGTCTCTCTGAGTCT
TGAGGATGTCAACCCTGTTGGTCTTGGTAGACGATCTCGACAGCTCTTTGATGAGGTGTG
GCGTCGCTTTACGGAGCTCGGACAGCTTACACGATCTCCTCGGGACAGTGAGGAGTACGA
AAGTGTGTTGATAGGAGGCCCAATGTGTGAGTTTACAATCCCTGGGGCAGAGTCCACAAC
TGTCCTTGTTGCAGGTGCCACCAGTCGCGTGGGTCGGATTGTCATT
■■Homology search results ■■ -
sp_hit_id P36785
Definition sp|P36785|VE2_HPV17 Regulatory protein E2 OS=Human papillomavirus type 17
Align length 66
Score (bit) 30.4
E-value 8.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961532|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_G05, 5'
(646 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P36785|VE2_HPV17 Regulatory protein E2 OS=Human papillomaviru... 30 8.3

>sp|P36785|VE2_HPV17 Regulatory protein E2 OS=Human papillomavirus
type 17 GN=E2 PE=3 SV=1
Length = 452

Score = 30.4 bits (67), Expect = 8.3
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = -2

Query: 600 VVDSAPGIVNSHIGPPINTLSYSSLSRGDRVSCPSSVKRRHTSSKSCRDRLPRPTGLTSS 421
V S+P PIN S SS +RG + S+ + TS + R + PT T+
Sbjct: 198 VTSSSPAAGEGTDASPINAASRSSPARGLSATSVSTRTTQRTSPRRYRRKASSPTATTTR 257

Query: 420 RLRETV 403
R+ +
Sbjct: 258 HKRQDI 263


tr_hit_id B8LQR3
Definition tr|B8LQR3|B8LQR3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 78
Score (bit) 133.0
E-value 8.0e-30
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961532|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_G05, 5'
(646 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LQR3|B8LQR3_PICSI Putative uncharacterized protein OS=Picea... 133 8e-30
tr|A7Q4K0|A7Q4K0_VITVI Chromosome chr9 scaffold_49, whole genome... 115 2e-24
tr|A9TUM7|A9TUM7_PHYPA Predicted protein OS=Physcomitrella paten... 113 9e-24
tr|A9PHQ9|A9PHQ9_POPTR Putative uncharacterized protein OS=Popul... 112 3e-23
tr|Q9FWQ6|Q9FWQ6_ARATH F17F16.7 protein OS=Arabidopsis thaliana ... 109 2e-22
tr|Q8W4D6|Q8W4D6_ARATH Putative uncharacterized protein At1g1672... 109 2e-22
tr|A9SR28|A9SR28_PHYPA Predicted protein OS=Physcomitrella paten... 107 5e-22
tr|Q84P75|Q84P75_ORYSJ Putative uncharacterized protein OS=Oryza... 104 4e-21
tr|Q6YXY0|Q6YXY0_ORYSJ Os02g0137700 protein OS=Oryza sativa subs... 104 4e-21
tr|Q5Z8V8|Q5Z8V8_ORYSJ Os06g0704700 protein OS=Oryza sativa subs... 104 4e-21
tr|A3A2Y6|A3A2Y6_ORYSJ Putative uncharacterized protein OS=Oryza... 104 4e-21
tr|A2YGS4|A2YGS4_ORYSI Putative uncharacterized protein OS=Oryza... 104 4e-21
tr|A2X0N8|A2X0N8_ORYSI Putative uncharacterized protein OS=Oryza... 104 4e-21
tr|Q00TV5|Q00TV5_OSTTA Putative UOS1 (ISS) OS=Ostreococcus tauri... 72 4e-11
tr|A4S8P7|A4S8P7_OSTLU Predicted protein (Fragment) OS=Ostreococ... 64 8e-09
tr|A8HTK2|A8HTK2_CHLRE Predicted protein OS=Chlamydomonas reinha... 58 4e-07
tr|A8LJY8|A8LJY8_DINSH Putative uncharacterized protein OS=Dinor... 35 3.0
tr|Q5C0S3|Q5C0S3_SCHJA SJCHGC02679 protein (Fragment) OS=Schisto... 35 3.0
tr|A1L2N9|A1L2N9_XENLA LOC100036905 protein OS=Xenopus laevis GN... 34 6.7
tr|A3AVL9|A3AVL9_ORYSJ Putative uncharacterized protein OS=Oryza... 26 7.7
tr|B4PFD4|B4PFD4_DROYA GE22425 OS=Drosophila yakuba GN=GE22425 P... 34 8.7
tr|B4IVY9|B4IVY9_DROYA GE14716 OS=Drosophila yakuba GN=GE14716 P... 34 8.7

>tr|B8LQR3|B8LQR3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 516

Score = 133 bits (335), Expect = 8e-30
Identities = 60/78 (76%), Positives = 73/78 (93%)
Frame = +2

Query: 413 LSLEDVNPVGLGRRSRQLFDEVWRRFTELGQLTRSPRDSEEYESVLIGGPMCEFTIPGAE 592
LSL+DVNPVGLGR+SRQ+FDEVWR+F+ELGQL+R+PR+ EEY+SVL+GGPMCEFTIP A
Sbjct: 79 LSLDDVNPVGLGRKSRQIFDEVWRKFSELGQLSRTPRNDEEYDSVLVGGPMCEFTIPAAA 138

Query: 593 STTVLVAGATSRVGRIVI 646
TTVLV GATSR+GRI++
Sbjct: 139 DTTVLVVGATSRIGRILV 156


>tr|A7Q4K0|A7Q4K0_VITVI Chromosome chr9 scaffold_49, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029723001
PE=4 SV=1
Length = 498

Score = 115 bits (289), Expect = 2e-24
Identities = 53/78 (67%), Positives = 67/78 (85%)
Frame = +2

Query: 413 LSLEDVNPVGLGRRSRQLFDEVWRRFTELGQLTRSPRDSEEYESVLIGGPMCEFTIPGAE 592
+SL+DVNPVGLGR+SRQ+FDEVWR+F+ LGQ++R+ R EE + GGPMCEF IPGA+
Sbjct: 2 ISLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRTDEETLLIREGGPMCEFAIPGAQ 61

Query: 593 STTVLVAGATSRVGRIVI 646
+TTVLV GATSR+GRIV+
Sbjct: 62 NTTVLVVGATSRIGRIVV 79


>tr|A9TUM7|A9TUM7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_151003 PE=4 SV=1
Length = 509

Score = 113 bits (283), Expect = 9e-24
Identities = 55/80 (68%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = +2

Query: 413 LSLEDVNPVGLGRRSRQLFDEVWRRFTELGQLTRSPRDSEEY--ESVLIGGPMCEFTIPG 586
LSL+DVNPVGLGRR+RQ+FD WRR T LGQLT + R S+EY E V++GGPMC+F P
Sbjct: 5 LSLDDVNPVGLGRRTRQVFDAAWRRLTNLGQLTSASRPSDEYDFEKVVVGGPMCDFQTPN 64

Query: 587 AESTTVLVAGATSRVGRIVI 646
AE TTVLVAGAT RVGRI++
Sbjct: 65 AELTTVLVAGATGRVGRILV 84


>tr|A9PHQ9|A9PHQ9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 584

Score = 112 bits (279), Expect = 3e-23
Identities = 55/81 (67%), Positives = 70/81 (86%), Gaps = 3/81 (3%)
Frame = +2

Query: 413 LSLEDVNPVGLGRRSRQLFDEVWRRFTELGQLTRSPR--DSEEYESVLI-GGPMCEFTIP 583
L+LEDVNPVGLGR+SRQ+FDEVWR+F+ LGQ++R+ R D E +++LI GPMCEF IP
Sbjct: 85 LNLEDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTTRADDKEALDALLIREGPMCEFAIP 144

Query: 584 GAESTTVLVAGATSRVGRIVI 646
GA++TTVLV GATSR+GRIV+
Sbjct: 145 GAQNTTVLVVGATSRIGRIVV 165


>tr|Q9FWQ6|Q9FWQ6_ARATH F17F16.7 protein OS=Arabidopsis thaliana
GN=F17F16.7 PE=4 SV=1
Length = 583

Score = 109 bits (272), Expect = 2e-22
Identities = 53/81 (65%), Positives = 68/81 (83%), Gaps = 3/81 (3%)
Frame = +2

Query: 413 LSLEDVNPVGLGRRSRQLFDEVWRRFTELGQLTRS--PRDSEEYESVLI-GGPMCEFTIP 583
L L+DVNPVGLGRRSRQ+FDEVWR+F+ LGQ++R+ P + E +S+LI GPMCEF +P
Sbjct: 90 LKLDDVNPVGLGRRSRQIFDEVWRKFSGLGQMSRTTRPDEQETLDSLLIREGPMCEFAVP 149

Query: 584 GAESTTVLVAGATSRVGRIVI 646
GA++ TVLV GATSR+GRIV+
Sbjct: 150 GAQNVTVLVVGATSRIGRIVV 170


>tr|Q8W4D6|Q8W4D6_ARATH Putative uncharacterized protein At1g16720;
F17F16.7 (Putative uncharacterized protein At1g16720)
OS=Arabidopsis thaliana GN=At1g16720/F17F16.7 PE=2 SV=1
Length = 598

Score = 109 bits (272), Expect = 2e-22
Identities = 53/81 (65%), Positives = 68/81 (83%), Gaps = 3/81 (3%)
Frame = +2

Query: 413 LSLEDVNPVGLGRRSRQLFDEVWRRFTELGQLTRS--PRDSEEYESVLI-GGPMCEFTIP 583
L L+DVNPVGLGRRSRQ+FDEVWR+F+ LGQ++R+ P + E +S+LI GPMCEF +P
Sbjct: 99 LKLDDVNPVGLGRRSRQIFDEVWRKFSGLGQMSRTTRPDEQETLDSLLIREGPMCEFAVP 158

Query: 584 GAESTTVLVAGATSRVGRIVI 646
GA++ TVLV GATSR+GRIV+
Sbjct: 159 GAQNVTVLVVGATSRIGRIVV 179


>tr|A9SR28|A9SR28_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_187481 PE=4 SV=1
Length = 509

Score = 107 bits (268), Expect = 5e-22
Identities = 51/80 (63%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2

Query: 413 LSLEDVNPVGLGRRSRQLFDEVWRRFTELGQLTRSPRDSEEY--ESVLIGGPMCEFTIPG 586
++L+DVNPV LGRR+RQ+FD+ WRR T+LG LT + R S+EY E+V++GGPMC+F P
Sbjct: 5 ITLDDVNPVRLGRRTRQVFDDAWRRLTKLGLLTSASRPSDEYDFETVVVGGPMCDFQTPN 64

Query: 587 AESTTVLVAGATSRVGRIVI 646
AE TTVL+AGAT RVGRI+I
Sbjct: 65 AELTTVLIAGATGRVGRILI 84


>tr|Q84P75|Q84P75_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica PE=2 SV=1
Length = 500

Score = 104 bits (260), Expect = 4e-21
Identities = 51/76 (67%), Positives = 65/76 (85%), Gaps = 3/76 (3%)
Frame = +2

Query: 428 VNPVGLGRRSRQLFDEVWRRFTELGQLTRSPRDS--EEYESVLI-GGPMCEFTIPGAEST 598
V+PVGLGRRSRQ+FDEVWR+F+ LGQ++ + + EE ++VLI GGPMCEFT+PGA+ T
Sbjct: 7 VSPVGLGRRSRQIFDEVWRKFSRLGQMSSASSTALAEEEQAVLIRGGPMCEFTVPGAQDT 66

Query: 599 TVLVAGATSRVGRIVI 646
TVLV GATSR+GRIV+
Sbjct: 67 TVLVVGATSRIGRIVV 82


>tr|Q6YXY0|Q6YXY0_ORYSJ Os02g0137700 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0026E05.10 PE=4 SV=1
Length = 598

Score = 104 bits (260), Expect = 4e-21
Identities = 53/83 (63%), Positives = 67/83 (80%), Gaps = 5/83 (6%)
Frame = +2

Query: 413 LSLEDV--NPVGLGRRSRQLFDEVWRRFTELGQL-TRSPRDSEEYESVLI--GGPMCEFT 577
++L+DV NPVGLGRRSRQ+FDEVWR+F+ LGQ+ T + + EE E VL GGPMC+F
Sbjct: 98 VALDDVIVNPVGLGRRSRQIFDEVWRKFSRLGQMSTVASPEQEEQEGVLFRGGGPMCDFA 157

Query: 578 IPGAESTTVLVAGATSRVGRIVI 646
+PGA+ TTVLV GATSR+GRIV+
Sbjct: 158 VPGAQDTTVLVVGATSRIGRIVV 180


>tr|Q5Z8V8|Q5Z8V8_ORYSJ Os06g0704700 protein OS=Oryza sativa subsp.
japonica GN=P0018H04.3 PE=2 SV=1
Length = 648

Score = 104 bits (260), Expect = 4e-21
Identities = 51/76 (67%), Positives = 65/76 (85%), Gaps = 3/76 (3%)
Frame = +2

Query: 428 VNPVGLGRRSRQLFDEVWRRFTELGQLTRSPRDS--EEYESVLI-GGPMCEFTIPGAEST 598
V+PVGLGRRSRQ+FDEVWR+F+ LGQ++ + + EE ++VLI GGPMCEFT+PGA+ T
Sbjct: 155 VSPVGLGRRSRQIFDEVWRKFSRLGQMSSASSTALAEEEQAVLIRGGPMCEFTVPGAQDT 214

Query: 599 TVLVAGATSRVGRIVI 646
TVLV GATSR+GRIV+
Sbjct: 215 TVLVVGATSRIGRIVV 230