| DK961546 |
| Clone id |
TST39A01NGRL0010_G19 |
| Library |
TST39 |
| Length |
651 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_G19. 5' end sequence. |
| Accession |
DK961546 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL233Contig1 |
| Sequence |
GAGCAACTGAACGAAGGGCTTTGCTTAAGCGGAATTTCCCTCTTAGGGCTACCGGTCAAA
AGCTTCAGGCAGCTCAGACGCTCCTTGAGAAGGAGATGCTGCAGATTCTGTTGTAGGTGT
GTTCTCTTCACTCCGGTGAAGTGAAGACCGGTGATATGTACAAAGATAGGGGTGATGGGC
GTGGTGGAAGCCGTGAATCTATCGATGCTAAGAAGCGCATTGAGGAGACTCTAGAGAGGA
CATCTCCTTCGACATCCAAGGGAAATGCAAGGGAAAAAGATCGTGTTTCTATGGTGCCTG
CATCAACTGGTAGACGCCTAGGCTCTGTTGACTTAAGGCCTACATTTGACAAGACCAAGT
ATGCAGACGATGGCGAAGAATCAGAGACTGACAGCGAAGAATCGGATGTTAGTGGATCAG
ATGGTGACGACACTTCTTGGGTTTCTTGGTTTTGCGGTTTGAGAGGGAATGAGTTCTTTT
GTGAGGTGGACGACGAGTACATTCAGGATGATTTCAATTTAAGTGGACTAAGCAGCCAGG
TCCCTTATTATGAGTATGCACTGGATTTGATTCTGGATGCAGAGTCTCCGAATGTTGACA
TGTTAACTGATGAGCAGAATGAGATGGTGGAATCGGCTGCAGAAATGCTGT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P40228 |
| Definition |
sp|P40228|CSK2B_ARATH Casein kinase II subunit beta OS=Arabidopsis thaliana |
| Align length |
162 |
| Score (bit) |
121.0 |
| E-value |
3.0e-27 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9T768 |
| Definition |
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
155 |
| Score (bit) |
163.0 |
| E-value |
1.0e-38 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961546|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_G19, 5'
(651 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella paten... 163 1e-38
tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella paten... 146 9e-34
tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea... 136 1e-30
tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella paten... 133 1e-29
tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genom... 131 4e-29
tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Popul... 128 3e-28
tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2... 127 8e-28
tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 126 1e-27
tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS... 124 4e-27
tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative... 124 4e-27
tr|Q0KKA4|Q0KKA4_HORVU Casein kinase II beta OS=Hordeum vulgare ... 124 4e-27
tr|B8BIA2|B8BIA2_ORYSI Putative uncharacterized protein OS=Oryza... 124 4e-27
tr|A9S7H2|A9S7H2_PHYPA Predicted protein OS=Physcomitrella paten... 124 5e-27
tr|Q7XC26|Q7XC26_ORYSJ Casein kinase II beta-4 subunit, putative... 123 8e-27
tr|Q336R6|Q336R6_ORYSJ Os10g0564900 protein OS=Oryza sativa subs... 123 8e-27
tr|Q2V308|Q2V308_ARATH Uncharacterized protein At5g47080.3 OS=Ar... 122 1e-26
tr|Q8LPD2|Q8LPD2_TOBAC Protein kinase Ck2 regulatory subunit 2 O... 122 2e-26
tr|Q3E8F5|Q3E8F5_ARATH Uncharacterized protein At5g47080.2 OS=Ar... 121 3e-26
tr|Q9FQF7|Q9FQF7_MAIZE Protein kinase CK2 regulatory subunit CK2... 120 9e-26
tr|B6SQ06|B6SQ06_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 120 9e-26
tr|B4FN07|B4FN07_MAIZE Putative uncharacterized protein OS=Zea m... 120 9e-26
tr|A5BGR6|A5BGR6_VITVI Putative uncharacterized protein OS=Vitis... 119 2e-25
tr|Q9FQF6|Q9FQF6_MAIZE Protein kinase CK2 regulatory subunit CK2... 118 4e-25
tr|Q84VF5|Q84VF5_ORYSJ Possible protein kinase CK2 regulatory su... 118 4e-25
tr|Q84RS4|Q84RS4_ORYSJ Os07g0495100 protein OS=Oryza sativa subs... 118 4e-25
tr|B8B6D0|B8B6D0_ORYSI Putative uncharacterized protein OS=Oryza... 118 4e-25
tr|B6TNU8|B6TNU8_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 118 4e-25
tr|B6TIH0|B6TIH0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 118 4e-25
tr|B6TGH2|B6TGH2_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 118 4e-25
tr|B4G0Y3|B4G0Y3_MAIZE Putative uncharacterized protein OS=Zea m... 118 4e-25
>tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_59578 PE=4 SV=1
Length = 298
Score = 163 bits (412), Expect = 1e-38
Identities = 87/155 (56%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
Frame = +3
Query: 192 RESIDAKKRIEETLERTSPSTSKGN-AREKDRVSMVPAST-GRRLGSVDLRPTFDKTKYA 365
R+ D KKR+E+ ++++SPSTS+G REKDR++ A+T RR + RPT +K KY
Sbjct: 26 RDVTDNKKRLEDGIDKSSPSTSRGGIGREKDRIAAPAATTQSRRNAGHETRPTMEKAKYP 85
Query: 366 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 545
FC LRGNEFFCEVDDEYIQDDFNLSGLSSQVP
Sbjct: 86 EDAEDSESESEDSDVSASDGEDTSWISWFCSLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 145
Query: 546 YYEYALDLILDAESPNVDMLTDEQNEMVESAAEML 650
YY+YALDLILD ESP+ DMLT+EQNE+VESAAEML
Sbjct: 146 YYDYALDLILDVESPSDDMLTEEQNELVESAAEML 180
>tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219176 PE=4 SV=1
Length = 299
Score = 146 bits (369), Expect = 9e-34
Identities = 86/158 (54%), Positives = 99/158 (62%), Gaps = 5/158 (3%)
Frame = +3
Query: 192 RESIDAKKRIEETLERTSP-STSKGN-AREKDRVSMVPASTGR-RLGSVDLRPTFDKTKY 362
R+ D KKR E + P STSKG REKDR++ + T R +++ RPT +K KY
Sbjct: 24 RDVTDNKKRFEGGIPLLQPPSTSKGLIGREKDRIAAAASKTQTSRNAALEARPTLEKAKY 83
Query: 363 AXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FCGLRGNEFFCEVDDEYIQDDFNLSGLSS 536
FCGLRGNEFFCEVDDEYIQDDFNLSGLSS
Sbjct: 84 PEDVAAEDSESESEDSDVSASDGEDTSWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSS 143
Query: 537 QVPYYEYALDLILDAESPNVDMLTDEQNEMVESAAEML 650
QVPYY+YALDLILD ESP+ DMLT+EQNE+VESAAEML
Sbjct: 144 QVPYYDYALDLILDVESPSDDMLTEEQNELVESAAEML 181
>tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 297
Score = 136 bits (343), Expect = 1e-30
Identities = 81/154 (52%), Positives = 91/154 (59%), Gaps = 7/154 (4%)
Frame = +3
Query: 210 KKRIEETL------ERTSPSTSKGNAREKDRVSMVPASTGRRL-GSVDLRPTFDKTKYAX 368
+KRI + L E++ PSTSKG R+S+ S GRR G DKT YA
Sbjct: 29 RKRINDALDKHLHLEKSPPSTSKGL---NGRLSIPSTSAGRRAPGDSRNASALDKTNYAE 85
Query: 369 XXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPY 548
FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPY
Sbjct: 86 DVEDSDTDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPY 145
Query: 549 YEYALDLILDAESPNVDMLTDEQNEMVESAAEML 650
Y+YALDLILD ES N D+LT+EQNE+VESAAEML
Sbjct: 146 YDYALDLILDVESSNDDILTEEQNELVESAAEML 179
>tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_116155 PE=4 SV=1
Length = 249
Score = 133 bits (334), Expect = 1e-29
Identities = 75/147 (51%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
Frame = +3
Query: 213 KRIEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 389
KR+++ +E++S STSKG +EKDR++ A+T + L + DL +++ +
Sbjct: 2 KRLDDGIEKSSASTSKGWIGKEKDRLAPAAAAT-QILVAEDLESESEESDVSGSDGEDTA 60
Query: 390 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 569
FCGLRGNEFFCE+DDEYIQDDFNLSGL SQVPYY+YALDL
Sbjct: 61 WISW----------------FCGLRGNEFFCEIDDEYIQDDFNLSGLRSQVPYYDYALDL 104
Query: 570 ILDAESPNVDMLTDEQNEMVESAAEML 650
ILD E P+ D+LT+EQNE+VESAAEML
Sbjct: 105 ILDVEPPSDDILTEEQNELVESAAEML 131
>tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019032001
PE=4 SV=1
Length = 288
Score = 131 bits (329), Expect = 4e-29
Identities = 75/147 (51%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
Frame = +3
Query: 219 IEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKT--KYAXXXXXXXX 389
+++ LE++SPSTSKG ++++K+R+S+ S G+ +D R T + K
Sbjct: 28 LDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGK--SQLDHRDTRAASLPKNKCSDEESET 85
Query: 390 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 569
FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPYY+YALDL
Sbjct: 86 DSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDL 145
Query: 570 ILDAESPNVDMLTDEQNEMVESAAEML 650
ILD ES + DM T+EQNE+VESAAEML
Sbjct: 146 ILDVESSHGDMFTEEQNELVESAAEML 172
>tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 330
Score = 128 bits (322), Expect = 3e-28
Identities = 75/156 (48%), Positives = 94/156 (60%), Gaps = 12/156 (7%)
Frame = +3
Query: 219 IEETLERTSPSTSKG---NAREKDRVSMVPASTGRRLGS---------VDLRPTFDKTKY 362
+++ LE++SPSTS+G ++++K+R+S+ STG+ L D R +K
Sbjct: 31 LDKHLEKSSPSTSRGLNNSSKDKERLSVPSTSTGKSLQHHQQQLDHHRADSRSA-SLSKN 89
Query: 363 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQV 542
FC LRGNEFFCEVDDEYIQDDFNL GLSSQV
Sbjct: 90 KCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQV 149
Query: 543 PYYEYALDLILDAESPNVDMLTDEQNEMVESAAEML 650
PYY+YALDLILD ES + DM T+EQNE+VESAAEML
Sbjct: 150 PYYDYALDLILDVESSHGDMFTEEQNELVESAAEML 185
>tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2B1
(Putative uncharacterized protein) OS=Zea mays PE=2 SV=1
Length = 276
Score = 127 bits (318), Expect = 8e-28
Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Frame = +3
Query: 210 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 383
+KRI E ++R+SPSTS G REK+R+ + R G + K A
Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGSTAMSKSKLSDAESETDS 75
Query: 384 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYAL 563
FC L+GNEFFCEVDD+YIQDDFNL GLS+QVPYY+YAL
Sbjct: 76 EESDVSGSDGEDTSWISW----FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 131
Query: 564 DLILDAESPNVDMLTDEQNEMVESAAEML 650
DLILD ES + DMLT+EQNE++ESAAEML
Sbjct: 132 DLILDVESSHGDMLTEEQNELIESAAEML 160
>tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea mays
PE=2 SV=1
Length = 275
Score = 126 bits (316), Expect = 1e-27
Identities = 73/149 (48%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Frame = +3
Query: 210 KKRIEETLERTSPSTSKG--NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXX 383
+KRI E ++R+SPSTS G REK+R+ + R G K+K +
Sbjct: 16 RKRIGEPMDRSSPSTSWGFSGGREKERIGVGKQPEMPRSGGGST--AMSKSKLSDESETD 73
Query: 384 XXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYAL 563
FC L+GNEFFCEVDD+YIQDDFNL GLS+QVPYY+YAL
Sbjct: 74 SEESDVSGSDGEDTSWISW---FCSLKGNEFFCEVDDDYIQDDFNLCGLSNQVPYYDYAL 130
Query: 564 DLILDAESPNVDMLTDEQNEMVESAAEML 650
DLILD ES + DMLT+EQNE++ESAAEML
Sbjct: 131 DLILDVESSHGDMLTEEQNELIESAAEML 159
>tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit
OS=Oryza sativa GN=OSJNBa0027P10.8 PE=4 SV=1
Length = 280
Score = 124 bits (312), Expect = 4e-27
Identities = 70/147 (47%), Positives = 90/147 (61%)
Frame = +3
Query: 210 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 389
K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K +
Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 390 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 569
FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL
Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 570 ILDAESPNVDMLTDEQNEMVESAAEML 650
ILD ES N D+ T+EQNE++ES+AEML
Sbjct: 137 ILDIESSNGDVFTEEQNELIESSAEML 163
>tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative,
expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os10g41520 PE=4 SV=2
Length = 280
Score = 124 bits (312), Expect = 4e-27
Identities = 70/147 (47%), Positives = 90/147 (61%)
Frame = +3
Query: 210 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 389
K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K +
Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 390 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 569
FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL
Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 570 ILDAESPNVDMLTDEQNEMVESAAEML 650
ILD ES N D+ T+EQNE++ES+AEML
Sbjct: 137 ILDIESSNGDVFTEEQNELIESSAEML 163
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