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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961552
Clone id TST39A01NGRL0010_H01
Library
Length 629
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_H01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATTATGGCTGAAAAGTATATTTGAAGGCAAGCAAATTTGCAAACAGTTACTTTTTTAAAA
GCTTGAAGCAAGTTTTTTTGTTTGTTTGCTGTTGAGATTAGCTTTGAAGTGTCTTTGTAG
ACAGGACAAAAAAGACCTTGCCAATGTCTTGTTCCATTTCTTCATGTACTGCCAGAATTG
AGTTTTTGTTACTATGGTTGTAAGAGCTTTGTCAAGTAGGTTGAACCTCATTCCTCGTGC
AATGCGTGCATTCGACGTTTTGAAAGCTACCATGTGTCTTATCCTTGTGTTTTTTAGCAT
ACATAACATTGTCCAATAATCTTAGATCTAGCTGGACAGGGGCTTCCCCTATTCCCTTGG
CTCATATAAGCTCTGCCATGCTGAAGGCACCTGCTCTTCTTCTGTGTCTGAGCTGGTCAC
CCGCAGTCTGCTACCTCTACAAGCCACGGCTTTTTTTGTCCTATGCAGATTTCCCCCTCT
GTAGCCCTGATTGCTCTCGCCCTCAGACAATGCCTTTTCTTGGCTCAGACATCCCTTTGG
TTCAGCTTAGCCCTGTGCAAGCCCACAACTCTGTTGTCTGTAGCACACCCCCCCATACAG
GTCACCCAAAGATGCTGATTTTGGTTGTG
■■Homology search results ■■ -
sp_hit_id Q91496
Definition sp|Q91496|FOS_TETFL Proto-oncogene protein c-fos OS=Tetraodon fluviatilis
Align length 42
Score (bit) 34.3
E-value 0.54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961552|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_H01, 5'
         (629 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q91496|FOS_TETFL Proto-oncogene protein c-fos OS=Tetraodon fl...    34   0.54 
sp|P08519|APOA_HUMAN Apolipoprotein(a) OS=Homo sapiens GN=LPA PE...    34   0.54 
sp|P47342|Y096_MYCGE Uncharacterized protein MG096 OS=Mycoplasma...    33   1.2  
sp|Q5GV68|RPPH_XANOR RNA pyrophosphohydrolase OS=Xanthomonas ory...    32   2.7  
sp|Q2NYE5|RPPH_XANOM RNA pyrophosphohydrolase OS=Xanthomonas ory...    32   2.7  
sp|Q8PD65|RPPH_XANCP RNA pyrophosphohydrolase OS=Xanthomonas cam...    32   2.7  
sp|Q4UZF0|RPPH_XANC8 RNA pyrophosphohydrolase OS=Xanthomonas cam...    32   2.7  
sp|Q3BYA7|RPPH_XANC5 RNA pyrophosphohydrolase OS=Xanthomonas cam...    32   2.7  
sp|Q8PQ40|RPPH_XANAC RNA pyrophosphohydrolase OS=Xanthomonas axo...    32   2.7  
sp|P20918|PLMN_MOUSE Plasminogen OS=Mus musculus GN=Plg PE=1 SV=2      32   3.5  
sp|P12545|PLMN_MACMU Plasminogen OS=Macaca mulatta GN=PLG PE=2 SV=1    31   4.6  
sp|P00747|PLMN_HUMAN Plasminogen OS=Homo sapiens GN=PLG PE=1 SV=2      31   6.0  
sp|P81286|PLMN_SHEEP Plasminogen (Fragment) OS=Ovis aries GN=PLG...    30   7.8  
sp|Q5R8X6|PLMN_PONAB Plasminogen OS=Pongo abelii GN=PLG PE=2 SV=1      30   7.8  
sp|Q29485|PLMN_ERIEU Plasminogen OS=Erinaceus europaeus GN=PLG P...    30   7.8  
sp|P98088|MUC5A_HUMAN Mucin-5AC (Fragments) OS=Homo sapiens GN=M...    30   7.8  

>sp|Q91496|FOS_TETFL Proto-oncogene protein c-fos OS=Tetraodon
           fluviatilis GN=fos PE=3 SV=1
          Length = 374

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 486 PDCSRPQTMPFLGSDIPLVQLSPVQAHNSVVCSTPPHTGHPK 611
           P C  P  M    SD P+V +SPV A+ S   ST P T  P+
Sbjct: 185 PICKIPSQMD---SDFPVVSMSPVHAYLSTAASTQPQTSVPE 223


>sp|P08519|APOA_HUMAN Apolipoprotein(a) OS=Homo sapiens GN=LPA PE=1
            SV=1
          Length = 4548

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +3

Query: 429  CYLYKPRLFLSYADFPLC---SPDCSRPQTMP 515
            CY   PR    Y D PLC   S DC +PQ  P
Sbjct: 4290 CYTMNPRKLFDYCDIPLCASSSFDCGKPQVEP 4321


>sp|P47342|Y096_MYCGE Uncharacterized protein MG096 OS=Mycoplasma
           genitalium GN=MG096 PE=3 SV=2
          Length = 650

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -3

Query: 222 NLLDKALTTIVTKTQFWQYMKKWNKTLARSFLSCLQRHFKANLNSKQTKKLA 67
           +L+D   T I T      Y  +    L + F S ++R+F AN N K+ KKLA
Sbjct: 411 DLIDALKTAIATPA----YRNRTFSLLIKGFASGVERYFNANKNDKELKKLA 458


>sp|Q5GV68|RPPH_XANOR RNA pyrophosphohydrolase OS=Xanthomonas oryzae
           pv. oryzae GN=rppH PE=3 SV=1
          Length = 205

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 515 RHCLRARAIRATEGEICIGQKKPWLV 438
           R+ L +RA+R  E ++CIGQK+ W +
Sbjct: 76  RYRLPSRAVRRNERQVCIGQKQVWFL 101


>sp|Q2NYE5|RPPH_XANOM RNA pyrophosphohydrolase OS=Xanthomonas oryzae
           pv. oryzae (strain MAFF 311018) GN=rppH PE=3 SV=1
          Length = 205

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 515 RHCLRARAIRATEGEICIGQKKPWLV 438
           R+ L +RA+R  E ++CIGQK+ W +
Sbjct: 76  RYRLPSRAVRRNERQVCIGQKQVWFL 101


>sp|Q8PD65|RPPH_XANCP RNA pyrophosphohydrolase OS=Xanthomonas
           campestris pv. campestris GN=rppH PE=3 SV=1
          Length = 205

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 515 RHCLRARAIRATEGEICIGQKKPWLV 438
           R+ L +RA+R  E ++CIGQK+ W +
Sbjct: 76  RYRLPSRAVRRNERQVCIGQKQVWFL 101


>sp|Q4UZF0|RPPH_XANC8 RNA pyrophosphohydrolase OS=Xanthomonas
           campestris pv. campestris (strain 8004) GN=rppH PE=3
           SV=1
          Length = 205

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 515 RHCLRARAIRATEGEICIGQKKPWLV 438
           R+ L +RA+R  E ++CIGQK+ W +
Sbjct: 76  RYRLPSRAVRRNERQVCIGQKQVWFL 101


>sp|Q3BYA7|RPPH_XANC5 RNA pyrophosphohydrolase OS=Xanthomonas
           campestris pv. vesicatoria (strain 85-10) GN=rppH PE=3
           SV=1
          Length = 205

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 515 RHCLRARAIRATEGEICIGQKKPWLV 438
           R+ L +RA+R  E ++CIGQK+ W +
Sbjct: 76  RYRLPSRAVRRNERQVCIGQKQVWFL 101


>sp|Q8PQ40|RPPH_XANAC RNA pyrophosphohydrolase OS=Xanthomonas
           axonopodis pv. citri GN=rppH PE=3 SV=1
          Length = 205

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 515 RHCLRARAIRATEGEICIGQKKPWLV 438
           R+ L +RA+R  E ++CIGQK+ W +
Sbjct: 76  RYRLPSRAVRRNERQVCIGQKQVWFL 101


>sp|P20918|PLMN_MOUSE Plasminogen OS=Mus musculus GN=Plg PE=1 SV=2
          Length = 812

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
 Frame = +3

Query: 429 CYLYKPRLFLSYADFPLC----SPDCSRPQTMP 515
           CY   PR    Y D PLC    S +C +PQ  P
Sbjct: 543 CYTTNPRKLYDYCDIPLCASASSFECGKPQVEP 575
tr_hit_id Q1EAG0
Definition tr|Q1EAG0|Q1EAG0_COCIM Putative uncharacterized protein OS=Coccidioides immitis
Align length 47
Score (bit) 37.7
E-value 0.57
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961552|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_H01, 5'
         (629 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1EAG0|Q1EAG0_COCIM Putative uncharacterized protein OS=Cocci...    38   0.57 
tr|A4Q7Y5|A4Q7Y5_MYCH7 Putative uncharacterized protein OS=Mycop...    35   3.7  
tr|B4NKT9|B4NKT9_DROWI GK13982 OS=Drosophila willistoni GN=GK139...    35   4.8  
tr|Q4RR39|Q4RR39_TETNG Chromosome 14 SCAF15003, whole genome sho...    34   6.3  
tr|Q3JSX2|Q3JSX2_BURP1 Putative uncharacterized protein OS=Burkh...    34   6.3  
tr|B7P6X9|B7P6X9_IXOSC Hemolectin, putative (Fragment) OS=Ixodes...    34   6.3  
tr|Q1HP67|Q1HP67_HUMAN Lipoprotein, Lp(A) OS=Homo sapiens GN=LPA...    34   6.3  
tr|A9V6G7|A9V6G7_MONBE Predicted protein OS=Monosiga brevicollis...    34   8.2  

>tr|Q1EAG0|Q1EAG0_COCIM Putative uncharacterized protein
           OS=Coccidioides immitis GN=CIMG_00453 PE=4 SV=1
          Length = 586

 Score = 37.7 bits (86), Expect = 0.57
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = +3

Query: 435 LYKPRLFLSYADFPLCSPDCSRPQTMPFLGSDIPLVQLSPVQAHNSV 575
           L KPR+F S +   L SP  +RPQ +PFL S  P+V+LSP  A  S+
Sbjct: 27  LPKPRMFTSNSQLLLISPPANRPQ-LPFLHS--PVVRLSPSHASRSL 70


>tr|A4Q7Y5|A4Q7Y5_MYCH7 Putative uncharacterized protein
           OS=Mycoplasma hyopneumoniae (strain 7448)
           GN=MHP7448_0718 PE=4 SV=1
          Length = 77

 Score = 35.0 bits (79), Expect = 3.7
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
 Frame = -3

Query: 321 DYWTMLCMLKNTRIRHMVAFKTSNARIARGMRFNLLD----------KALTTIVTKTQFW 172
           D +  +C  K  R      FK      ++G++  +LD          K    I TK+QFW
Sbjct: 5   DIFKKVCQNKQYRFTAEDKFKCIKNVKSKGLKIAILDFTEEFSQIYKKEKCKIDTKSQFW 64

Query: 171 QYMKKWNKTL 142
            YMK++NK L
Sbjct: 65  MYMKQFNKKL 74


>tr|B4NKT9|B4NKT9_DROWI GK13982 OS=Drosophila willistoni GN=GK13982
           PE=4 SV=1
          Length = 475

 Score = 34.7 bits (78), Expect = 4.8
 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = +3

Query: 405 CLSWSPAVCYLYKPRLFLSYADFPLCSPD-CSRP----QTMPFLGSDIPLVQLSPVQAHN 569
           CL  SP +C  Y P    S  D  LC P  C+RP    +    + SD P   + P     
Sbjct: 341 CLVKSPRICRNYAPNWVCSSRDLKLCDPKVCTRPIIYLKPPHIVESDDPPFLIMPPNP-P 399

Query: 570 SVVCSTP 590
            +VCSTP
Sbjct: 400 QLVCSTP 406


>tr|Q4RR39|Q4RR39_TETNG Chromosome 14 SCAF15003, whole genome
           shotgun sequence OS=Tetraodon nigroviridis
           GN=GSTENG00030333001 PE=4 SV=1
          Length = 411

 Score = 34.3 bits (77), Expect = 6.3
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 486 PDCSRPQTMPFLGSDIPLVQLSPVQAHNSVVCSTPPHTGHPK 611
           P C  P  M    SD P+V +SPV A+ S   ST P T  P+
Sbjct: 221 PICKIPSQMD---SDFPVVSMSPVHAYLSTAASTQPQTSVPE 259


>tr|Q3JSX2|Q3JSX2_BURP1 Putative uncharacterized protein
           OS=Burkholderia pseudomallei (strain 1710b)
           GN=BURPS1710b_1933 PE=4 SV=1
          Length = 1038

 Score = 34.3 bits (77), Expect = 6.3
 Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 14/97 (14%)
 Frame = +3

Query: 348 PIPLAHISSAMLKAPALLLCLSWSPAVCYLYKPRLFLSYADFP---------LCSPDCSR 500
           P PL   S+A L  P +L  ++ +P V  L +P   +     P         L +PD   
Sbjct: 347 PRPLLSASAAALMMPPVLPTVAPTPCVTPLPRPGTLVELIVLPRSVAVLPSVLTTPDVPA 406

Query: 501 PQTMPF-----LGSDIPLVQLSPVQAHNSVVCSTPPH 596
              +P      L   +PLV L P  A    V S PPH
Sbjct: 407 VPLVPLVPLVPLVPLVPLVPLVPPPADGGAVTSLPPH 443


>tr|B7P6X9|B7P6X9_IXOSC Hemolectin, putative (Fragment) OS=Ixodes
            scapularis GN=IscW_ISCW001097 PE=4 SV=1
          Length = 2842

 Score = 34.3 bits (77), Expect = 6.3
 Identities = 33/96 (34%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
 Frame = +3

Query: 342  ASPIPLAHISSAMLKAPALLLCLSWSPAVCYLYKPRLFLSYADFPLC--------SPDCS 497
            ASP   +  SS   K PA L   S  PA C   KP L L    FPLC        +P+  
Sbjct: 722  ASPPTASRTSSTSTKTPAYLC--STVPACCPNEKPPLRLVAFCFPLCDMSLCTAYTPEPE 779

Query: 498  RPQTMPFLGSDIP-----LVQLSPVQAHNSVVCSTP 590
                 P+  +D P        L P+QAH   VC  P
Sbjct: 780  GGCWTPWFSADSPEGPGDFEDLRPMQAHGK-VCFQP 814


>tr|Q1HP67|Q1HP67_HUMAN Lipoprotein, Lp(A) OS=Homo sapiens GN=LPA PE=2
            SV=1
          Length = 2040

 Score = 34.3 bits (77), Expect = 6.3
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +3

Query: 429  CYLYKPRLFLSYADFPLC---SPDCSRPQTMP 515
            CY   PR    Y D PLC   S DC +PQ  P
Sbjct: 1782 CYTMNPRKLFDYCDIPLCASSSFDCGKPQVEP 1813


>tr|A9V6G7|A9V6G7_MONBE Predicted protein OS=Monosiga brevicollis
           GN=27938 PE=4 SV=1
          Length = 1681

 Score = 33.9 bits (76), Expect = 8.2
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
 Frame = +3

Query: 234 LVQCVHSTF*---KLPCVLSLCFLAYITLSNNLRSSWTGASPIPLAHISSAMLKAPALLL 404
           L+ C  S F     + C+ SL  L +I+LS +L  S T    + L+HISS+ L   +L L
Sbjct: 28  LISCFSSRFRLSLSISCLASL--LPFISLSLSLNLSLTSHHSLSLSHISSSSLSL-SLSL 84

Query: 405 CLSWSPAVCY 434
            LS S   CY
Sbjct: 85  SLSRSATRCY 94