DK961554
Clone id TST39A01NGRL0010_H03
Library
Length 607
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_H03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GATTAGCATAGCAAAGGGAGAGTGATTGTACGCAGTATTCATTATGGGCATCTCCATAGC
CGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTT
CTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCGAGAGCCCCGACCCGCTGGCCATCTC
TGATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGA
GACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGAGTGCGAATCATGAGGACTTCAT
GGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCCGGGAGCGTGTACCGAG
AGCACTTCCGCGGCAGCGGCTACTACAATGGGCGGGACTGGGAGATGTGGAAGCTGCCCA
TGTATGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAATGCGCCAAGGAGT
ATCCTGAAGCCTTCATCCACGTGCTGGGCTTTGACGCTGAGAGGCAGGTGCAGGTCTCTC
GGCTTCCTTGTCCAGAAGCCCTCTGTCTAGACTTTCTTAAAGCATGCCAATTAAGTTGGC
ATGAATG
■■Homology search results ■■ -
sp_hit_id O65349
Definition sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum
Align length 66
Score (bit) 92.8
E-value 1.0e-35
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961554|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_H03, 5'
(607 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 93 1e-35
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 97 5e-35
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 98 2e-34
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 87 1e-33
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 89 1e-33
sp|P05349|RBS3B_SOLLC Ribulose bisphosphate carboxylase small ch... 88 2e-33
sp|P07180|RBS3A_SOLLC Ribulose bisphosphate carboxylase small ch... 88 2e-33
sp|P26574|RBS1_SOLTU Ribulose bisphosphate carboxylase small cha... 92 3e-33
sp|P22433|RBS2_NICSY Ribulose bisphosphate carboxylase small cha... 88 5e-33
sp|P07179|RBS2A_SOLLC Ribulose bisphosphate carboxylase small ch... 87 8e-33
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 90 8e-33
sp|P26577|RBSC_SOLTU Ribulose bisphosphate carboxylase small cha... 88 1e-32
sp|P26576|RBSB_SOLTU Ribulose bisphosphate carboxylase small cha... 88 1e-32
sp|P69249|RBS_TOBAC Ribulose bisphosphate carboxylase small chai... 88 2e-32
sp|P69250|RBS1_NICSY Ribulose bisphosphate carboxylase small cha... 88 2e-32
sp|Q41351|RBS_STELP Ribulose bisphosphate carboxylase small chai... 87 3e-32
sp|P04714|RBS1_PETHY Ribulose bisphosphate carboxylase small cha... 83 3e-32
sp|P26575|RBSA_SOLTU Ribulose bisphosphate carboxylase small cha... 88 4e-32
sp|Q9XGX5|RBS2_AMAHP Ribulose bisphosphate carboxylase small cha... 87 5e-32
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 81 5e-32
sp|Q04450|RBS2_MESCR Ribulose bisphosphate carboxylase small cha... 85 7e-32
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha... 87 1e-31
sp|Q08183|RBS3_MESCR Ribulose bisphosphate carboxylase small cha... 87 1e-31
sp|Q42516|RBS1_AMAHP Ribulose bisphosphate carboxylase small cha... 87 1e-31
sp|P04715|RBS2_PETHY Ribulose bisphosphate carboxylase small cha... 83 1e-31
sp|Q9XGX4|RBS3_AMAHP Ribulose bisphosphate carboxylase small cha... 87 1e-31
sp|P16032|RBS1_MESCR Ribulose bisphosphate carboxylase small cha... 87 1e-31
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 86 2e-31
sp|Q08184|RBS4_MESCR Ribulose bisphosphate carboxylase small cha... 87 2e-31
sp|P32764|RBS3_SOLTU Ribulose bisphosphate carboxylase small cha... 89 2e-31

>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
Length = 187

Score = 92.8 bits (229), Expect(2) = 1e-35
Identities = 40/66 (60%), Positives = 48/66 (72%)
Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
T+ G VYREH R GYY+GR W MWKLPM+GC DA VL E+ E K YP+A+I ++GFD
Sbjct: 103 TEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFD 162

Query: 516 AERQVQ 533
RQVQ
Sbjct: 163 NVRQVQ 168



Score = 77.8 bits (190), Expect(2) = 1e-35
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
S+ SF+GLK+ F L I S+G RV MLVW P + KK+ETLSYLP LS
Sbjct: 21 SMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
EQ +++++KGW PC+EF+
Sbjct: 81 EQLLKEIEYLLQKGWVPCLEFE 102


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 97.1 bits (240), Expect(2) = 5e-35
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +3

Query: 345 GSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFDAER 524
G VYREH R GYY+GR W MWKLPM+GC D++ VL+E+ EC K YP AFI ++GFD +R
Sbjct: 108 GFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKR 167

Query: 525 QVQV 536
QVQ+
Sbjct: 168 QVQI 171



Score = 71.6 bits (174), Expect(2) = 5e-35
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Frame = +2

Query: 104 SLSKSFSGLKATTLFA---PESPDPLAI-SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
S+ F+ LK+T+ F + D +I S+G RV M VW P KKFETLSYLPPLSS
Sbjct: 23 SMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSS 82

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
EQ A D+++RK PC+EF+
Sbjct: 83 EQLAKEVDYLLRKNLIPCLEFE 104


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
Length = 180

Score = 98.2 bits (243), Expect(2) = 2e-34
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
T G VYREH GYY+GR W MWKLPM+GC D A VL E+ EC KEYP AFI ++GFD
Sbjct: 103 TDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFD 162

Query: 516 AERQVQ 533
+ RQVQ
Sbjct: 163 SNRQVQ 168



Score = 68.9 bits (167), Expect(2) = 2e-34
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2

Query: 104 SLSKSFSGLKATTLF-APESPDPLA--ISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 274
S+ F+GLK+T F A + D + S+G RV M VW + K++ETLSYLPPL+++
Sbjct: 22 SMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTD 81

Query: 275 QSANHEDFMVRKGWTPCIEFD 337
Q A D+++ W PC+EF+
Sbjct: 82 QLARQVDYLLNNKWVPCLEFE 102


>sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Medicago sativa PE=2 SV=1
Length = 180

Score = 87.4 bits (215), Expect(2) = 1e-33
Identities = 35/65 (53%), Positives = 50/65 (76%)
Frame = +3

Query: 339 KSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFDA 518
+ G VYRE+ R GYY+GR W MW+LP++G D++ VL+E+A+C EYP++FI ++GFD
Sbjct: 104 EKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDN 163

Query: 519 ERQVQ 533
RQVQ
Sbjct: 164 VRQVQ 168



Score = 77.0 bits (188), Expect(2) = 1e-33
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Frame = +2

Query: 104 SLSKSFSGLKATTLFA---PESPDPLAI-SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
+L F+GLK++ F + D +I S+G RV+ M VW P KKFETLSYLPPL+
Sbjct: 21 NLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTE 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
EQ A ++++RKGW PC+EF+
Sbjct: 81 EQLAKEVEYLIRKGWIPCLEFE 102


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 89.0 bits (219), Expect(2) = 1e-33
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = +3

Query: 339 KSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFDA 518
K G VYRE+ GYY+GR W MWKLPM+GC D++ VL+E+ EC+K YP+ F ++GFD
Sbjct: 102 KVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDN 161

Query: 519 ERQVQ 533
RQVQ
Sbjct: 162 TRQVQ 166



Score = 75.1 bits (183), Expect(2) = 1e-33
Identities = 38/76 (50%), Positives = 45/76 (59%)
Frame = +2

Query: 116 SFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHED 295
S + T FA S P S+G RV M VW P KKFETLSYLPPL+ EQ D
Sbjct: 31 SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 296 FMVRKGWTPCIEFDKI 343
+++R GW PCIEF K+
Sbjct: 88 YLIRNGWIPCIEFCKV 103


>sp|P05349|RBS3B_SOLLC Ribulose bisphosphate carboxylase small chain
3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B
PE=3 SV=1
Length = 180

Score = 88.2 bits (217), Expect(2) = 2e-33
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
T+ G VYRE+ + GYY+GR W MWKLPM+GC DA VL E+ E K YP+A++ ++GFD
Sbjct: 103 TEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFD 162

Query: 516 AERQVQ 533
RQVQ
Sbjct: 163 NVRQVQ 168



Score = 75.1 bits (183), Expect(2) = 2e-33
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
S+ F+GLK+T F L I S+G RVS M VW P + KK+ETLSYLP LS
Sbjct: 21 SMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
EQ + +++++ GW PC+EF+
Sbjct: 81 EQLLSEIEYLLKNGWVPCLEFE 102


>sp|P07180|RBS3A_SOLLC Ribulose bisphosphate carboxylase small chain
3A/3C, chloroplastic OS=Solanum lycopersicum
GN=RBCS-3A/3C PE=3 SV=1
Length = 180

Score = 88.2 bits (217), Expect(2) = 2e-33
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
T+ G VYRE+ + GYY+GR W MWKLPM+GC DA VL E+ E K YP+A++ ++GFD
Sbjct: 103 TEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFD 162

Query: 516 AERQVQ 533
RQVQ
Sbjct: 163 NVRQVQ 168



Score = 75.1 bits (183), Expect(2) = 2e-33
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
S+ F+GLK+T F L I S+G RVS M VW P + KK+ETLSYLP LS
Sbjct: 21 SMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
EQ + +++++ GW PC+EF+
Sbjct: 81 EQLLSEIEYLLKNGWVPCLEFE 102


>sp|P26574|RBS1_SOLTU Ribulose bisphosphate carboxylase small chain
1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3
SV=1
Length = 181

Score = 92.4 bits (228), Expect(2) = 3e-33
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
T+ G VYRE+ + GYY+GR W MWKLPM+GC DA VL E+ EC K YP+A+I ++GFD
Sbjct: 104 TEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFD 163

Query: 516 AERQVQ 533
RQVQ
Sbjct: 164 NVRQVQ 169



Score = 70.5 bits (171), Expect(2) = 3e-33
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
S+ F+GLK+ F L I S+G RV M VW P + KK+ETLSYLP L+
Sbjct: 22 SMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTD 81

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
EQ +++++ GW PC+EF+
Sbjct: 82 EQLLKEVEYLLKNGWVPCLEFE 103


>sp|P22433|RBS2_NICSY Ribulose bisphosphate carboxylase small chain
S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1
Length = 181

Score = 87.8 bits (216), Expect(2) = 5e-33
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
T+ G VYRE+ + GYY+GR W MWKLPM+GC DA VL E+ E K YP+A+I ++GFD
Sbjct: 104 TEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFD 163

Query: 516 AERQVQ 533
RQVQ
Sbjct: 164 NVRQVQ 169



Score = 74.3 bits (181), Expect(2) = 5e-33
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
S+ F+GLK+ T F L I S+G RV M VW P + KK+ETLSYLP LS
Sbjct: 22 SMIAPFTGLKSATSFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSE 81

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
EQ +++++ GW PC+EF+
Sbjct: 82 EQLLREVEYLLKNGWVPCLEFE 103


>sp|P07179|RBS2A_SOLLC Ribulose bisphosphate carboxylase small chain
2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A
PE=2 SV=2
Length = 180

Score = 87.4 bits (215), Expect(2) = 8e-33
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
T+ G VYRE+ + GYY+GR W MWKLPM+GC DA VL E+ E K YP+A++ ++GFD
Sbjct: 103 TEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFD 162

Query: 516 AERQVQ 533
RQVQ
Sbjct: 163 NVRQVQ 168



Score = 73.9 bits (180), Expect(2) = 8e-33
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
S+ F+GLK++ F L I S+G RVS M VW P + KK+ETLSYLP LS
Sbjct: 21 SMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
EQ + +++++ GW PC+EF+
Sbjct: 81 EQLLSEIEYLLKNGWVPCLEFE 102


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 81
Score (bit) 137.0
E-value 3.0e-59
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961554|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_H03, 5'
(607 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 137 3e-59
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 88 1e-35
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 87 4e-35
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 88 1e-34
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 87 2e-34
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 87 2e-34
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c... 93 2e-34
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 87 3e-34
tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3 OS=Ar... 99 8e-34
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 88 1e-33
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c... 98 2e-33
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 84 3e-33
tr|Q8CFJ2|Q8CFJ2_MOUSE Putative uncharacterized protein OS=Mus m... 92 9e-33
tr|Q84QE5|Q84QE5_TOBAC Ribulose bisphosphate carboxylase small c... 89 1e-32
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 84 1e-32
tr|A9YTZ8|A9YTZ8_SOLTU Ribulose bisphosphate carboxylase small c... 92 2e-32
tr|A9YTZ9|A9YTZ9_SOLTU Ribulose bisphosphate carboxylase small c... 92 3e-32
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 85 3e-32
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 85 3e-32
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 85 3e-32
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 85 7e-32
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c... 94 9e-32
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c... 94 9e-32
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza... 94 9e-32
tr|A9YTZ7|A9YTZ7_SOLTU Ribulose bisphosphate carboxylase small c... 91 9e-32
tr|B7FHB2|B7FHB2_MEDTR Putative uncharacterized protein OS=Medic... 83 9e-32
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 83 1e-31
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 84 3e-31
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c... 82 4e-31
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c... 82 4e-31

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 137 bits (344), Expect(2) = 3e-59
Identities = 64/81 (79%), Positives = 73/81 (90%)
Frame = +2

Query: 101 ESLSKSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQS 280
ESLSKSFSGLKA TLFAP+ +PLAIS+GSR+SAMLVWKPYDNKKFETLSYLPPL+++Q
Sbjct: 20 ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79

Query: 281 ANHEDFMVRKGWTPCIEFDKI 343
A ++MVRKGWTPCIEFD I
Sbjct: 80 AKQVEYMVRKGWTPCIEFDTI 100



Score = 116 bits (290), Expect(2) = 3e-59
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +3

Query: 345 GSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFDAER 524
GSVYREHF GSGYY+GR W MWKLPM+GC D+ +VLREIAECAKEYP AFI VLGFDA+R
Sbjct: 101 GSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKR 160

Query: 525 QVQVS 539
QVQV+
Sbjct: 161 QVQVA 165


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 88.2 bits (217), Expect(2) = 1e-35
Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
GSV R +F G SGYY+GR W MWKLPM+GC D+A VLREI EC + +P ++ VLGFD
Sbjct: 104 GSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFD 163

Query: 516 AERQVQV 536
+++QVQ+
Sbjct: 164 SKKQVQI 170



Score = 86.3 bits (212), Expect(2) = 1e-35
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
K FSGLK+TTLFA ++ ++ +GSRV M VW P KFET SYLPPL+ +Q A
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 293 DFMVRKGWTPCIEFDKI 343
DFM+++ PCIEFD +
Sbjct: 87 DFMIQQNLIPCIEFDTV 103


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 86.7 bits (213), Expect(2) = 4e-35
Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Frame = +3

Query: 345 GSVYREHFRGSG---YYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
G+V R +F GSG YY+GR W MWKLPM+GC D++ VLREI EC YP ++ VLGFD
Sbjct: 109 GAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFD 168

Query: 516 AERQVQV 536
+++QVQ+
Sbjct: 169 SKKQVQI 175



Score = 85.9 bits (211), Expect(2) = 4e-35
Identities = 39/77 (50%), Positives = 51/77 (66%)
Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
K+FSGLK+ TLF +S ++ +GSRV M VW P KFET SYLPPLS +Q A
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 293 DFMVRKGWTPCIEFDKI 343
D+M+++ PCIEFD +
Sbjct: 92 DYMIQQNLIPCIEFDTV 108


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 88.2 bits (217), Expect(2) = 1e-34
Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
GSV R +F G SGYY+GR W MWKLPM+GC D+A VLREI EC + +P ++ VLGFD
Sbjct: 104 GSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFD 163

Query: 516 AERQVQV 536
+++QVQ+
Sbjct: 164 SKKQVQI 170



Score = 83.2 bits (204), Expect(2) = 1e-34
Identities = 39/77 (50%), Positives = 51/77 (66%)
Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
K FSGLK+TTL A ++ ++ +GSRV M VW P KFET SYLPPL+ +Q A
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 293 DFMVRKGWTPCIEFDKI 343
DFM+++ PCIEFD +
Sbjct: 87 DFMIQQNLIPCIEFDTV 103


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 87.4 bits (215), Expect(2) = 2e-34
Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
GSV R +F G SGYY+GR W MWKLPM+GC D++ VLREI EC ++P ++ VLGFD
Sbjct: 139 GSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFD 198

Query: 516 AERQVQV 536
+++QVQ+
Sbjct: 199 SKKQVQI 205



Score = 83.2 bits (204), Expect(2) = 2e-34
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
K+FSGLK+ TLF+ ++ ++ +GSRV M VW P KFET SYLPPL+ +Q A
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 293 DFMVRKGWTPCIEFDKI 343
D+M+++ PCIEFD +
Sbjct: 122 DYMIQQNLIPCIEFDTV 138


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 87.4 bits (215), Expect(2) = 2e-34
Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
GSV R +F G SGYY+GR W MWKLPM+GC D++ VLREI EC ++P ++ VLGFD
Sbjct: 109 GSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFD 168

Query: 516 AERQVQV 536
+++QVQ+
Sbjct: 169 SKKQVQI 175



Score = 83.2 bits (204), Expect(2) = 2e-34
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
K+FSGLK TLF+ ++ A+ +GSRV M VW P KFET SYLPPL+ +Q A
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 293 DFMVRKGWTPCIEFDKI 343
D+M+++ PCIEFD +
Sbjct: 92 DYMIQQNLIPCIEFDTV 108


>tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small
chain OS=Capsicum annuum PE=2 SV=1
Length = 180

Score = 92.8 bits (229), Expect(2) = 2e-34
Identities = 40/66 (60%), Positives = 48/66 (72%)
Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
T+ G VYREH R GYY+GR W MWKLPM+GC DA VL E+ E K YP+A+I ++GFD
Sbjct: 103 TEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFD 162

Query: 516 AERQVQ 533
RQVQ
Sbjct: 163 NVRQVQ 168



Score = 77.8 bits (190), Expect(2) = 2e-34
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
S+ SF+GLK+ F L I S+G RV MLVW P + KK+ETLSYLP LS
Sbjct: 21 SMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVQCMLVWPPINKKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
EQ +++++KGW PC+EF+
Sbjct: 81 EQLLKEIEYLLQKGWVPCLEFE 102


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 87.0 bits (214), Expect(2) = 3e-34
Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
GSV R +F G SGYY+GR W MWKLPM+GC D++ VLREI EC ++P ++ VLGFD
Sbjct: 108 GSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFD 167

Query: 516 AERQVQV 536
+++QVQ+
Sbjct: 168 SKKQVQI 174



Score = 82.8 bits (203), Expect(2) = 3e-34
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
K+FSGLK+ TLF+ ++ ++ +GSRV M VW P KFET SYLPPL+ ++ A
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 293 DFMVRKGWTPCIEFDKI 343
D+M+++ PCIEFD +
Sbjct: 91 DYMIQQNLIPCIEFDTV 107


>tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3
OS=Arabidopsis thaliana GN=At5g38410 PE=4 SV=1
Length = 186

Score = 98.6 bits (244), Expect(2) = 8e-34
Identities = 43/71 (60%), Positives = 53/71 (74%)
Frame = +3

Query: 321 LALSSTKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIH 500
L + +TK G VYREH GYY+GR W MWKLP++GC D+A VL+E+ EC KEYP AFI
Sbjct: 101 LEVINTKHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIR 160

Query: 501 VLGFDAERQVQ 533
++GFD RQVQ
Sbjct: 161 IIGFDNTRQVQ 171



Score = 69.7 bits (169), Expect(2) = 8e-34
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Frame = +2

Query: 119 FSGLKATTLFA---PESPDPLAI-SDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSAN 286
F+GLK++ F + D +I S+G RVS M VW P KKFETLSYLP LS + A
Sbjct: 24 FTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAK 83

Query: 287 HEDFMVRKGWTPCIEFD 337
D+++R W PC+EF+
Sbjct: 84 EVDYLLRNKWIPCVEFE 100


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_123666 PE=3 SV=1
Length = 181

Score = 87.8 bits (216), Expect(2) = 1e-33
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = +3

Query: 327 LSSTKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVL 506
L S V RE+ GYY+GR W MWKLPM+GCQD+A VLREI EC K +P F+ VL
Sbjct: 103 LEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVL 162

Query: 507 GFDAERQVQV 536
GFD +QVQ+
Sbjct: 163 GFDNVKQVQI 172



Score = 80.1 bits (196), Expect(2) = 1e-33
Identities = 36/75 (48%), Positives = 51/75 (68%)
Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
K+FSGLK+ TLF+ +S ++ +GSRV+ M VW P KFET SYLPPLS + A
Sbjct: 32 KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 293 DFMVRKGWTPCIEFD 337
++M+++ PC+EFD
Sbjct: 92 EYMIQQKLIPCLEFD 106