NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961554
Clone id TST39A01NGRL0010_H03
Library
Length 607
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_H03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GATTAGCATAGCAAAGGGAGAGTGATTGTACGCAGTATTCATTATGGGCATCTCCATAGC
CGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTT
CTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCGAGAGCCCCGACCCGCTGGCCATCTC
TGATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGA
GACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGAGTGCGAATCATGAGGACTTCAT
GGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCCGGGAGCGTGTACCGAG
AGCACTTCCGCGGCAGCGGCTACTACAATGGGCGGGACTGGGAGATGTGGAAGCTGCCCA
TGTATGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAATGCGCCAAGGAGT
ATCCTGAAGCCTTCATCCACGTGCTGGGCTTTGACGCTGAGAGGCAGGTGCAGGTCTCTC
GGCTTCCTTGTCCAGAAGCCCTCTGTCTAGACTTTCTTAAAGCATGCCAATTAAGTTGGC
ATGAATG
■■Homology search results ■■ -
sp_hit_id O65349
Definition sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum
Align length 66
Score (bit) 92.8
E-value 1.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961554|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_H03, 5'
         (607 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...    93   1e-35
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...    97   5e-35
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...    98   2e-34
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...    87   1e-33
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...    89   1e-33
sp|P05349|RBS3B_SOLLC Ribulose bisphosphate carboxylase small ch...    88   2e-33
sp|P07180|RBS3A_SOLLC Ribulose bisphosphate carboxylase small ch...    88   2e-33
sp|P26574|RBS1_SOLTU Ribulose bisphosphate carboxylase small cha...    92   3e-33
sp|P22433|RBS2_NICSY Ribulose bisphosphate carboxylase small cha...    88   5e-33
sp|P07179|RBS2A_SOLLC Ribulose bisphosphate carboxylase small ch...    87   8e-33
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...    90   8e-33
sp|P26577|RBSC_SOLTU Ribulose bisphosphate carboxylase small cha...    88   1e-32
sp|P26576|RBSB_SOLTU Ribulose bisphosphate carboxylase small cha...    88   1e-32
sp|P69249|RBS_TOBAC Ribulose bisphosphate carboxylase small chai...    88   2e-32
sp|P69250|RBS1_NICSY Ribulose bisphosphate carboxylase small cha...    88   2e-32
sp|Q41351|RBS_STELP Ribulose bisphosphate carboxylase small chai...    87   3e-32
sp|P04714|RBS1_PETHY Ribulose bisphosphate carboxylase small cha...    83   3e-32
sp|P26575|RBSA_SOLTU Ribulose bisphosphate carboxylase small cha...    88   4e-32
sp|Q9XGX5|RBS2_AMAHP Ribulose bisphosphate carboxylase small cha...    87   5e-32
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...    81   5e-32
sp|Q04450|RBS2_MESCR Ribulose bisphosphate carboxylase small cha...    85   7e-32
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha...    87   1e-31
sp|Q08183|RBS3_MESCR Ribulose bisphosphate carboxylase small cha...    87   1e-31
sp|Q42516|RBS1_AMAHP Ribulose bisphosphate carboxylase small cha...    87   1e-31
sp|P04715|RBS2_PETHY Ribulose bisphosphate carboxylase small cha...    83   1e-31
sp|Q9XGX4|RBS3_AMAHP Ribulose bisphosphate carboxylase small cha...    87   1e-31
sp|P16032|RBS1_MESCR Ribulose bisphosphate carboxylase small cha...    87   1e-31
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...    86   2e-31
sp|Q08184|RBS4_MESCR Ribulose bisphosphate carboxylase small cha...    87   2e-31
sp|P32764|RBS3_SOLTU Ribulose bisphosphate carboxylase small cha...    89   2e-31

>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score = 92.8 bits (229), Expect(2) = 1e-35
 Identities = 40/66 (60%), Positives = 48/66 (72%)
 Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           T+ G VYREH R  GYY+GR W MWKLPM+GC DA  VL E+ E  K YP+A+I ++GFD
Sbjct: 103 TEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFD 162

Query: 516 AERQVQ 533
             RQVQ
Sbjct: 163 NVRQVQ 168



 Score = 77.8 bits (190), Expect(2) = 1e-35
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
           S+  SF+GLK+   F       L I    S+G RV  MLVW P + KK+ETLSYLP LS 
Sbjct: 21  SMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
           EQ     +++++KGW PC+EF+
Sbjct: 81  EQLLKEIEYLLQKGWVPCLEFE 102


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score = 97.1 bits (240), Expect(2) = 5e-35
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +3

Query: 345 GSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFDAER 524
           G VYREH R  GYY+GR W MWKLPM+GC D++ VL+E+ EC K YP AFI ++GFD +R
Sbjct: 108 GFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKR 167

Query: 525 QVQV 536
           QVQ+
Sbjct: 168 QVQI 171



 Score = 71.6 bits (174), Expect(2) = 5e-35
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLFA---PESPDPLAI-SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
           S+   F+ LK+T+ F      + D  +I S+G RV  M VW P   KKFETLSYLPPLSS
Sbjct: 23  SMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSS 82

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
           EQ A   D+++RK   PC+EF+
Sbjct: 83  EQLAKEVDYLLRKNLIPCLEFE 104


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score = 98.2 bits (243), Expect(2) = 2e-34
 Identities = 42/66 (63%), Positives = 48/66 (72%)
 Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           T  G VYREH    GYY+GR W MWKLPM+GC D A VL E+ EC KEYP AFI ++GFD
Sbjct: 103 TDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFD 162

Query: 516 AERQVQ 533
           + RQVQ
Sbjct: 163 SNRQVQ 168



 Score = 68.9 bits (167), Expect(2) = 2e-34
 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLF-APESPDPLA--ISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 274
           S+   F+GLK+T  F A +  D +    S+G RV  M VW   + K++ETLSYLPPL+++
Sbjct: 22  SMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTD 81

Query: 275 QSANHEDFMVRKGWTPCIEFD 337
           Q A   D+++   W PC+EF+
Sbjct: 82  QLARQVDYLLNNKWVPCLEFE 102


>sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Medicago sativa PE=2 SV=1
          Length = 180

 Score = 87.4 bits (215), Expect(2) = 1e-33
 Identities = 35/65 (53%), Positives = 50/65 (76%)
 Frame = +3

Query: 339 KSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFDA 518
           + G VYRE+ R  GYY+GR W MW+LP++G  D++ VL+E+A+C  EYP++FI ++GFD 
Sbjct: 104 EKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDN 163

Query: 519 ERQVQ 533
            RQVQ
Sbjct: 164 VRQVQ 168



 Score = 77.0 bits (188), Expect(2) = 1e-33
 Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLFA---PESPDPLAI-SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
           +L   F+GLK++  F      + D  +I S+G RV+ M VW P   KKFETLSYLPPL+ 
Sbjct: 21  NLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTE 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
           EQ A   ++++RKGW PC+EF+
Sbjct: 81  EQLAKEVEYLIRKGWIPCLEFE 102


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score = 89.0 bits (219), Expect(2) = 1e-33
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = +3

Query: 339 KSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFDA 518
           K G VYRE+    GYY+GR W MWKLPM+GC D++ VL+E+ EC+K YP+ F  ++GFD 
Sbjct: 102 KVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDN 161

Query: 519 ERQVQ 533
            RQVQ
Sbjct: 162 TRQVQ 166



 Score = 75.1 bits (183), Expect(2) = 1e-33
 Identities = 38/76 (50%), Positives = 45/76 (59%)
 Frame = +2

Query: 116 SFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHED 295
           S +    T  FA  S  P   S+G RV  M VW P   KKFETLSYLPPL+ EQ     D
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 296 FMVRKGWTPCIEFDKI 343
           +++R GW PCIEF K+
Sbjct: 88  YLIRNGWIPCIEFCKV 103


>sp|P05349|RBS3B_SOLLC Ribulose bisphosphate carboxylase small chain
           3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B
           PE=3 SV=1
          Length = 180

 Score = 88.2 bits (217), Expect(2) = 2e-33
 Identities = 37/66 (56%), Positives = 48/66 (72%)
 Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           T+ G VYRE+ +  GYY+GR W MWKLPM+GC DA  VL E+ E  K YP+A++ ++GFD
Sbjct: 103 TEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFD 162

Query: 516 AERQVQ 533
             RQVQ
Sbjct: 163 NVRQVQ 168



 Score = 75.1 bits (183), Expect(2) = 2e-33
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
           S+   F+GLK+T  F       L I    S+G RVS M VW P + KK+ETLSYLP LS 
Sbjct: 21  SMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
           EQ  +  +++++ GW PC+EF+
Sbjct: 81  EQLLSEIEYLLKNGWVPCLEFE 102


>sp|P07180|RBS3A_SOLLC Ribulose bisphosphate carboxylase small chain
           3A/3C, chloroplastic OS=Solanum lycopersicum
           GN=RBCS-3A/3C PE=3 SV=1
          Length = 180

 Score = 88.2 bits (217), Expect(2) = 2e-33
 Identities = 37/66 (56%), Positives = 48/66 (72%)
 Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           T+ G VYRE+ +  GYY+GR W MWKLPM+GC DA  VL E+ E  K YP+A++ ++GFD
Sbjct: 103 TEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFD 162

Query: 516 AERQVQ 533
             RQVQ
Sbjct: 163 NVRQVQ 168



 Score = 75.1 bits (183), Expect(2) = 2e-33
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
           S+   F+GLK+T  F       L I    S+G RVS M VW P + KK+ETLSYLP LS 
Sbjct: 21  SMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
           EQ  +  +++++ GW PC+EF+
Sbjct: 81  EQLLSEIEYLLKNGWVPCLEFE 102


>sp|P26574|RBS1_SOLTU Ribulose bisphosphate carboxylase small chain
           1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3
           SV=1
          Length = 181

 Score = 92.4 bits (228), Expect(2) = 3e-33
 Identities = 39/66 (59%), Positives = 49/66 (74%)
 Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           T+ G VYRE+ +  GYY+GR W MWKLPM+GC DA  VL E+ EC K YP+A+I ++GFD
Sbjct: 104 TEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFD 163

Query: 516 AERQVQ 533
             RQVQ
Sbjct: 164 NVRQVQ 169



 Score = 70.5 bits (171), Expect(2) = 3e-33
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
           S+   F+GLK+   F       L I    S+G RV  M VW P + KK+ETLSYLP L+ 
Sbjct: 22  SMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTD 81

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
           EQ     +++++ GW PC+EF+
Sbjct: 82  EQLLKEVEYLLKNGWVPCLEFE 103


>sp|P22433|RBS2_NICSY Ribulose bisphosphate carboxylase small chain
           S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1
          Length = 181

 Score = 87.8 bits (216), Expect(2) = 5e-33
 Identities = 38/66 (57%), Positives = 48/66 (72%)
 Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           T+ G VYRE+ +  GYY+GR W MWKLPM+GC DA  VL E+ E  K YP+A+I ++GFD
Sbjct: 104 TEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFD 163

Query: 516 AERQVQ 533
             RQVQ
Sbjct: 164 NVRQVQ 169



 Score = 74.3 bits (181), Expect(2) = 5e-33
 Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
           S+   F+GLK+ T F       L I    S+G RV  M VW P + KK+ETLSYLP LS 
Sbjct: 22  SMIAPFTGLKSATSFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSE 81

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
           EQ     +++++ GW PC+EF+
Sbjct: 82  EQLLREVEYLLKNGWVPCLEFE 103


>sp|P07179|RBS2A_SOLLC Ribulose bisphosphate carboxylase small chain
           2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A
           PE=2 SV=2
          Length = 180

 Score = 87.4 bits (215), Expect(2) = 8e-33
 Identities = 37/66 (56%), Positives = 48/66 (72%)
 Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           T+ G VYRE+ +  GYY+GR W MWKLPM+GC DA  VL E+ E  K YP+A++ ++GFD
Sbjct: 103 TEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFD 162

Query: 516 AERQVQ 533
             RQVQ
Sbjct: 163 NVRQVQ 168



 Score = 73.9 bits (180), Expect(2) = 8e-33
 Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
           S+   F+GLK++  F       L I    S+G RVS M VW P + KK+ETLSYLP LS 
Sbjct: 21  SMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
           EQ  +  +++++ GW PC+EF+
Sbjct: 81  EQLLSEIEYLLKNGWVPCLEFE 102
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 81
Score (bit) 137.0
E-value 3.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961554|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_H03, 5'
         (607 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   137   3e-59
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...    88   1e-35
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...    87   4e-35
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...    88   1e-34
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...    87   2e-34
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...    87   2e-34
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...    93   2e-34
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...    87   3e-34
tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3 OS=Ar...    99   8e-34
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...    88   1e-33
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c...    98   2e-33
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...    84   3e-33
tr|Q8CFJ2|Q8CFJ2_MOUSE Putative uncharacterized protein OS=Mus m...    92   9e-33
tr|Q84QE5|Q84QE5_TOBAC Ribulose bisphosphate carboxylase small c...    89   1e-32
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...    84   1e-32
tr|A9YTZ8|A9YTZ8_SOLTU Ribulose bisphosphate carboxylase small c...    92   2e-32
tr|A9YTZ9|A9YTZ9_SOLTU Ribulose bisphosphate carboxylase small c...    92   3e-32
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...    85   3e-32
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...    85   3e-32
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...    85   3e-32
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...    85   7e-32
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...    94   9e-32
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...    94   9e-32
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...    94   9e-32
tr|A9YTZ7|A9YTZ7_SOLTU Ribulose bisphosphate carboxylase small c...    91   9e-32
tr|B7FHB2|B7FHB2_MEDTR Putative uncharacterized protein OS=Medic...    83   9e-32
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...    83   1e-31
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...    84   3e-31
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...    82   4e-31
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...    82   4e-31

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  137 bits (344), Expect(2) = 3e-59
 Identities = 64/81 (79%), Positives = 73/81 (90%)
 Frame = +2

Query: 101 ESLSKSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQS 280
           ESLSKSFSGLKA TLFAP+  +PLAIS+GSR+SAMLVWKPYDNKKFETLSYLPPL+++Q 
Sbjct: 20  ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79

Query: 281 ANHEDFMVRKGWTPCIEFDKI 343
           A   ++MVRKGWTPCIEFD I
Sbjct: 80  AKQVEYMVRKGWTPCIEFDTI 100



 Score =  116 bits (290), Expect(2) = 3e-59
 Identities = 52/65 (80%), Positives = 58/65 (89%)
 Frame = +3

Query: 345 GSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFDAER 524
           GSVYREHF GSGYY+GR W MWKLPM+GC D+ +VLREIAECAKEYP AFI VLGFDA+R
Sbjct: 101 GSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKR 160

Query: 525 QVQVS 539
           QVQV+
Sbjct: 161 QVQVA 165


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score = 88.2 bits (217), Expect(2) = 1e-35
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           GSV R +F G   SGYY+GR W MWKLPM+GC D+A VLREI EC + +P  ++ VLGFD
Sbjct: 104 GSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFD 163

Query: 516 AERQVQV 536
           +++QVQ+
Sbjct: 164 SKKQVQI 170



 Score = 86.3 bits (212), Expect(2) = 1e-35
 Identities = 40/77 (51%), Positives = 52/77 (67%)
 Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
           K FSGLK+TTLFA ++    ++ +GSRV  M VW P    KFET SYLPPL+ +Q A   
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 293 DFMVRKGWTPCIEFDKI 343
           DFM+++   PCIEFD +
Sbjct: 87  DFMIQQNLIPCIEFDTV 103


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score = 86.7 bits (213), Expect(2) = 4e-35
 Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = +3

Query: 345 GSVYREHFRGSG---YYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           G+V R +F GSG   YY+GR W MWKLPM+GC D++ VLREI EC   YP  ++ VLGFD
Sbjct: 109 GAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFD 168

Query: 516 AERQVQV 536
           +++QVQ+
Sbjct: 169 SKKQVQI 175



 Score = 85.9 bits (211), Expect(2) = 4e-35
 Identities = 39/77 (50%), Positives = 51/77 (66%)
 Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
           K+FSGLK+ TLF  +S    ++ +GSRV  M VW P    KFET SYLPPLS +Q A   
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 293 DFMVRKGWTPCIEFDKI 343
           D+M+++   PCIEFD +
Sbjct: 92  DYMIQQNLIPCIEFDTV 108


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score = 88.2 bits (217), Expect(2) = 1e-34
 Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           GSV R +F G   SGYY+GR W MWKLPM+GC D+A VLREI EC + +P  ++ VLGFD
Sbjct: 104 GSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFD 163

Query: 516 AERQVQV 536
           +++QVQ+
Sbjct: 164 SKKQVQI 170



 Score = 83.2 bits (204), Expect(2) = 1e-34
 Identities = 39/77 (50%), Positives = 51/77 (66%)
 Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
           K FSGLK+TTL A ++    ++ +GSRV  M VW P    KFET SYLPPL+ +Q A   
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 293 DFMVRKGWTPCIEFDKI 343
           DFM+++   PCIEFD +
Sbjct: 87  DFMIQQNLIPCIEFDTV 103


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score = 87.4 bits (215), Expect(2) = 2e-34
 Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           GSV R +F G   SGYY+GR W MWKLPM+GC D++ VLREI EC  ++P  ++ VLGFD
Sbjct: 139 GSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFD 198

Query: 516 AERQVQV 536
           +++QVQ+
Sbjct: 199 SKKQVQI 205



 Score = 83.2 bits (204), Expect(2) = 2e-34
 Identities = 37/77 (48%), Positives = 52/77 (67%)
 Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
           K+FSGLK+ TLF+ ++    ++ +GSRV  M VW P    KFET SYLPPL+ +Q A   
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 293 DFMVRKGWTPCIEFDKI 343
           D+M+++   PCIEFD +
Sbjct: 122 DYMIQQNLIPCIEFDTV 138


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score = 87.4 bits (215), Expect(2) = 2e-34
 Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           GSV R +F G   SGYY+GR W MWKLPM+GC D++ VLREI EC  ++P  ++ VLGFD
Sbjct: 109 GSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFD 168

Query: 516 AERQVQV 536
           +++QVQ+
Sbjct: 169 SKKQVQI 175



 Score = 83.2 bits (204), Expect(2) = 2e-34
 Identities = 38/77 (49%), Positives = 51/77 (66%)
 Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
           K+FSGLK  TLF+ ++    A+ +GSRV  M VW P    KFET SYLPPL+ +Q A   
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 293 DFMVRKGWTPCIEFDKI 343
           D+M+++   PCIEFD +
Sbjct: 92  DYMIQQNLIPCIEFDTV 108


>tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small
           chain OS=Capsicum annuum PE=2 SV=1
          Length = 180

 Score = 92.8 bits (229), Expect(2) = 2e-34
 Identities = 40/66 (60%), Positives = 48/66 (72%)
 Frame = +3

Query: 336 TKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           T+ G VYREH R  GYY+GR W MWKLPM+GC DA  VL E+ E  K YP+A+I ++GFD
Sbjct: 103 TEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFD 162

Query: 516 AERQVQ 533
             RQVQ
Sbjct: 163 NVRQVQ 168



 Score = 77.8 bits (190), Expect(2) = 2e-34
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 SLSKSFSGLKATTLFAPESPDPLAI----SDGSRVSAMLVWKPYDNKKFETLSYLPPLSS 271
           S+  SF+GLK+   F       L I    S+G RV  MLVW P + KK+ETLSYLP LS 
Sbjct: 21  SMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVQCMLVWPPINKKKYETLSYLPDLSD 80

Query: 272 EQSANHEDFMVRKGWTPCIEFD 337
           EQ     +++++KGW PC+EF+
Sbjct: 81  EQLLKEIEYLLQKGWVPCLEFE 102


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score = 87.0 bits (214), Expect(2) = 3e-34
 Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = +3

Query: 345 GSVYREHFRG---SGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVLGFD 515
           GSV R +F G   SGYY+GR W MWKLPM+GC D++ VLREI EC  ++P  ++ VLGFD
Sbjct: 108 GSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFD 167

Query: 516 AERQVQV 536
           +++QVQ+
Sbjct: 168 SKKQVQI 174



 Score = 82.8 bits (203), Expect(2) = 3e-34
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
           K+FSGLK+ TLF+ ++    ++ +GSRV  M VW P    KFET SYLPPL+ ++ A   
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 293 DFMVRKGWTPCIEFDKI 343
           D+M+++   PCIEFD +
Sbjct: 91  DYMIQQNLIPCIEFDTV 107


>tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3
           OS=Arabidopsis thaliana GN=At5g38410 PE=4 SV=1
          Length = 186

 Score = 98.6 bits (244), Expect(2) = 8e-34
 Identities = 43/71 (60%), Positives = 53/71 (74%)
 Frame = +3

Query: 321 LALSSTKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIH 500
           L + +TK G VYREH    GYY+GR W MWKLP++GC D+A VL+E+ EC KEYP AFI 
Sbjct: 101 LEVINTKHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIR 160

Query: 501 VLGFDAERQVQ 533
           ++GFD  RQVQ
Sbjct: 161 IIGFDNTRQVQ 171



 Score = 69.7 bits (169), Expect(2) = 8e-34
 Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = +2

Query: 119 FSGLKATTLFA---PESPDPLAI-SDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSAN 286
           F+GLK++  F      + D  +I S+G RVS M VW P   KKFETLSYLP LS  + A 
Sbjct: 24  FTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAK 83

Query: 287 HEDFMVRKGWTPCIEFD 337
             D+++R  W PC+EF+
Sbjct: 84  EVDYLLRNKWIPCVEFE 100


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score = 87.8 bits (216), Expect(2) = 1e-33
 Identities = 40/70 (57%), Positives = 48/70 (68%)
 Frame = +3

Query: 327 LSSTKSGSVYREHFRGSGYYNGRDWEMWKLPMYGCQDAAAVLREIAECAKEYPEAFIHVL 506
           L    S  V RE+    GYY+GR W MWKLPM+GCQD+A VLREI EC K +P  F+ VL
Sbjct: 103 LEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVL 162

Query: 507 GFDAERQVQV 536
           GFD  +QVQ+
Sbjct: 163 GFDNVKQVQI 172



 Score = 80.1 bits (196), Expect(2) = 1e-33
 Identities = 36/75 (48%), Positives = 51/75 (68%)
 Frame = +2

Query: 113 KSFSGLKATTLFAPESPDPLAISDGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQSANHE 292
           K+FSGLK+ TLF+ +S    ++ +GSRV+ M VW P    KFET SYLPPLS +  A   
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 293 DFMVRKGWTPCIEFD 337
           ++M+++   PC+EFD
Sbjct: 92  EYMIQQKLIPCLEFD 106