DK961560 |
Clone id |
TST39A01NGRL0010_H10 |
Library |
TST39 |
Length |
722 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_H10. 5' end sequence. |
Accession |
DK961560 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1393Contig1 |
Sequence |
CGATGGGCAACTGCCAGGCTGCAGAGATGGCAGGCGCTTTGGTGGAGGTGCCAGGGGGCC GCGTGGAGAGGGTGGTGATGGATTTGCAGAGTTCCTTCTCTGCTCAACGTCTCATGTCCG CCTACCCTGGCTACTTCGTGGCCCTCATGTCCAGCTCCTCCATCGTCCACCCCCTGGCCT TGCCTAGTACCCCCTCCAGTACCTCTAACCCCGCTCCTCTGCATTCCTTCAAGCTTCTTG CCTCGGATGCACCTCTTCGCAGCGGCCACCGTTATCGCCTTATCAGCTTTGAAGAAGTGC TTACTTGTTTCTCCCAGCAAGGACCGGGCGCCTATGCGAAGGGCTTCCTGACGGCCGTGA ATGCACACAAGCCACTATCGAGCAAGCATCATCACCTTACCAGAGATCAACCCTTGAACA ATCATCATGTTGTAAAGATAGGATGCTAGTGAAGTAGCTACTACGCGTTACAAGTGTTGA ATTTGATGAGAAGCTATTGCAACCTTGTCATGTCCATCAGCTACTCTTCCCCTCTGTAAT TCGAGCACCATTGGAAAACTCAAGGCACGGCCCTCCTAGCAGTACAGAGAGAGAGAGAGA GAGAGAGCCCAATGGTTTCTTCTCCACTCGTCCCTGCACGGGAGGCCTTGATGTATATGT TTACAACTCTTCCACCATCTATTAAGTCAATCCTTCTCCATAAAAAAAAAAAAAAAAAAA AA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q60963 |
Definition |
sp|Q60963|PAFA_MOUSE Platelet-activating factor acetylhydrolase OS=Mus musculus |
Align length |
59 |
Score (bit) |
34.3 |
E-value |
0.67 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FJW1 |
Definition |
tr|Q9FJW1|Q9FJW1_ARATH Genomic DNA, chromosome 5, TAC clone: K9I9 (Putative uncharacterized protein At5g67620) (At5g67620) OS=Arabidopsis thaliana |
Align length |
104 |
Score (bit) |
46.6 |
E-value |
0.002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961560|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_H10, 5' (701 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9FJW1|Q9FJW1_ARATH Genomic DNA, chromosome 5, TAC clone: K9I... 47 0.002 tr|A7QZC0|A7QZC0_VITVI Chromosome chr7 scaffold_270, whole genom... 44 0.013 tr|Q9FM06|Q9FM06_ARATH Arabidopsis thaliana genomic DNA, chromos... 43 0.017 tr|A9SVH9|A9SVH9_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.017 tr|B6U2N0|B6U2N0_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.038 tr|Q10QE1|Q10QE1_ORYSJ Os03g0200200 protein OS=Oryza sativa subs... 42 0.050 tr|B8AQ49|B8AQ49_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.050 tr|A9SLF6|A9SLF6_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.050 tr|A3AF58|A3AF58_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.050 tr|B6SN59|B6SN59_MAIZE Putative uncharacterized protein OS=Zea m... 41 0.065 tr|B6TYG8|B6TYG8_MAIZE Putative uncharacterized protein OS=Zea m... 37 1.2 tr|B4FPF9|B4FPF9_MAIZE Putative uncharacterized protein OS=Zea m... 36 2.1 tr|B4FJ61|B4FJ61_MAIZE Putative uncharacterized protein OS=Zea m... 36 2.1 tr|B4FZB9|B4FZB9_MAIZE Putative uncharacterized protein OS=Zea m... 35 3.6 tr|Q0DXP1|Q0DXP1_ORYSJ Os02g0741700 protein OS=Oryza sativa subs... 35 6.1 tr|B8AIE0|B8AIE0_ORYSI Putative uncharacterized protein OS=Oryza... 35 6.1 tr|Q9DB74|Q9DB74_MOUSE Putative uncharacterized protein OS=Mus m... 34 7.9 tr|Q921T4|Q921T4_MOUSE Phospholipase A2, group VII (Platelet-act... 34 7.9 tr|Q8BKM3|Q8BKM3_MOUSE Phospholipase A2, group VII (Platelet-act... 34 7.9 tr|Q3U1V7|Q3U1V7_MOUSE Putative uncharacterized protein (Fragmen... 34 7.9
>tr|Q9FJW1|Q9FJW1_ARATH Genomic DNA, chromosome 5, TAC clone: K9I9 (Putative uncharacterized protein At5g67620) (At5g67620) OS=Arabidopsis thaliana GN=At5g67620 PE=2 SV=1 Length = 182
Score = 46.6 bits (109), Expect = 0.002 Identities = 35/104 (33%), Positives = 47/104 (45%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNCQAAE A L + S +A +M + PG++VA++ +S + Sbjct: 1 MGNCQAAEAATVLIHHPAENKVER---IYWSVTASDIMKSNPGHYVAVVVTSPTMKNEKG 57
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVLTCFS 314 KLL D L GH YRL+SFEEVL F+ Sbjct: 58 LPLK----------QLKLLRPDDTLLIGHVYRLVSFEEVLNEFA 91
>tr|A7QZC0|A7QZC0_VITVI Chromosome chr7 scaffold_270, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010584001 PE=4 SV=1 Length = 179
Score = 43.5 bits (101), Expect = 0.013 Identities = 34/104 (32%), Positives = 46/104 (44%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNCQAAE A + + S SA +M++ PG++VAL+ +S Sbjct: 1 MGNCQAAEAATVVIQHPGNKIER----IYWSVSAHEVMTSNPGHYVALVVTSPTAKSENG 56
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVLTCFS 314 KLL D L G YRL+SFE+VL F+ Sbjct: 57 TPLK----------QLKLLRPDDTLLIGQVYRLVSFEDVLKEFA 90
>tr|Q9FM06|Q9FM06_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQB2 (Putative uncharacterized protein At5g62900) OS=Arabidopsis thaliana GN=At5g62900 PE=2 SV=1 Length = 161
Score = 43.1 bits (100), Expect = 0.017 Identities = 32/100 (32%), Positives = 45/100 (45%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNCQAAE A + + + +A ++ ++PG+ VAL+ SS++ H Sbjct: 1 MGNCQAAEAATTVIQQPDGKS----VRFYCTVNASEVIKSHPGHHVALLLSSAVPHGGSL 56
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVL 302 KLL L GH YRLIS EEV+ Sbjct: 57 RVTR-----------IKLLRPSDNLLLGHVYRLISSEEVM 85
>tr|A9SVH9|A9SVH9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_84534 PE=4 SV=1 Length = 569
Score = 43.1 bits (100), Expect = 0.017 Identities = 35/107 (32%), Positives = 44/107 (41%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNC A + A L S SAQ+LM YPG++VAL+S Sbjct: 174 MGNCHAVDPVCATVEHPNGKVEK----LYFSSSAQQLMLQYPGHYVALVS---------P 220
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVLTCFSQQG 323 KLL L G YRL+SFE+VL+ S +G Sbjct: 221 PPTPIADCPAHVKRKLKLLPPGTMLNIGSCYRLVSFEDVLSEMSDKG 267
>tr|B6U2N0|B6U2N0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 214
Score = 42.0 bits (97), Expect = 0.038 Identities = 35/106 (33%), Positives = 45/106 (42%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNCQAAE A L + SA +M+A PG++VA + I Sbjct: 1 MGNCQAAETATVLIQHPGGGRTERAY---WALSAGAVMAANPGHYVAAV----ITVPQPG 53
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVLTCFSQQ 320 KLL D L+ G YRL+SFEEVL F+ + Sbjct: 54 GAGDGAASAAAPVKHLKLLRPDDTLQLGRVYRLVSFEEVLREFASK 99
>tr|Q10QE1|Q10QE1_ORYSJ Os03g0200200 protein OS=Oryza sativa subsp. japonica GN=Os03g0200200 PE=4 SV=1 Length = 215
Score = 41.6 bits (96), Expect = 0.050 Identities = 33/106 (31%), Positives = 46/106 (43%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNCQAAE+A + + SA +M+A PG++VA +++ Sbjct: 1 MGNCQAAEVATVVIQHPGGGRTERAY---WAMSAGAVMAANPGHYVA-----AVITSPPA 52
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVLTCFSQQ 320 KLL D L G YRL+SFEEVL F+ + Sbjct: 53 AGASSATPAAAPVKHLKLLRPDDTLLLGRVYRLVSFEEVLREFASK 98
>tr|B8AQ49|B8AQ49_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10407 PE=4 SV=1 Length = 215
Score = 41.6 bits (96), Expect = 0.050 Identities = 33/106 (31%), Positives = 46/106 (43%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNCQAAE+A + + SA +M+A PG++VA +++ Sbjct: 1 MGNCQAAEVATVVIQHPGGGRTERAY---WAMSAGAVMAANPGHYVA-----AVITSPPA 52
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVLTCFSQQ 320 KLL D L G YRL+SFEEVL F+ + Sbjct: 53 AGASSATGAAAPVKHLKLLRPDDTLLLGRVYRLVSFEEVLREFASK 98
>tr|A9SLF6|A9SLF6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165563 PE=4 SV=1 Length = 205
Score = 41.6 bits (96), Expect = 0.050 Identities = 33/111 (29%), Positives = 47/111 (42%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNC A + A + S SA++LM YPG++VAL+ Sbjct: 1 MGNCHAVDPVCATVEHPSGKVDK----IYFSSSARQLMLRYPGHYVALLPPPPT------ 50
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVLTCFSQQGPGAY 335 KLL D+ L G YRL+SFE++L+ S+ G A+ Sbjct: 51 --SPADGSTPHMKRKLKLLPPDSMLNIGSCYRLVSFEDLLSEMSETGALAH 99
>tr|A3AF58|A3AF58_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009430 PE=4 SV=1 Length = 215
Score = 41.6 bits (96), Expect = 0.050 Identities = 33/106 (31%), Positives = 46/106 (43%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNCQAAE+A + + SA +M+A PG++VA +++ Sbjct: 1 MGNCQAAEVATVVIQHPGGGRTERAY---WAMSAGAVMAANPGHYVA-----AVITSPPA 52
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVLTCFSQQ 320 KLL D L G YRL+SFEEVL F+ + Sbjct: 53 AGASSANPAAAPVKHLKLLRPDDTLLLGRVYRLVSFEEVLREFASK 98
>tr|B6SN59|B6SN59_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 217
Score = 41.2 bits (95), Expect = 0.065 Identities = 35/106 (33%), Positives = 45/106 (42%) Frame = +3
Query: 3 MGNCQAAEMAGALXXXXXXXXXXXXMDLQSSFSAQRLMSAYPGYFVALMSSSSIVHXXXX 182 MGNCQAAE A L + SA +M+A PG++VA + + Sbjct: 1 MGNCQAAETATVLIQHPGGGRTERAY---WALSAGAVMAANPGHYVAAVITVPQPGGAGD 57
Query: 183 XXXXXXXXXXXXXHSFKLLASDAPLRSGHRYRLISFEEVLTCFSQQ 320 H KLL D L G YRL+SFEEVL F+ + Sbjct: 58 DGAASASAAAPVKH-LKLLRPDDTLLLGRVYRLVSFEEVLREFASK 102
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