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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961601
Clone id TST39A01NGRL0010_J08
Library
Length 627
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_J08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGATTGGAAGAGAGGCGCCCTGCTGGGCTCTTCCTGTGTGTGCGTGCAGCCTCTTCGATT
CCTCGTAGGCCATCCCGCGATCTAAAGGGAGTGTCTGCACAACATGGCCCTGATATTCCA
ACTCTGAGCTCTGCTCACCATCACCAGGTACCCTCCCCTTTCACTCTGCATCGCTACTTC
TTTGGTGCTCTCCAAAGATTATGTGCAATGGCTTCCCAAATGGCTTCCGCGGCCCTCAGG
CCATCCTTTCTCGTCTCGTCCATGTTTCGTCTCTGCTCTGCTTACACTGGCGAGATCTGC
ATCACGGAAACATCGCATCAAGCTTGCCATTCGCAGATAGACGTTACATTGGACAGGAAA
CCTCACCATGCTCGCCCTCCTCCATTTCCAGATCCCAACAAAGGATTCACCTCTCGACCC
TTTTGTTCATCGGGAGGCAGCAGATGCAAAGAGGCTTTCGTCAGAGCCTGGCATGATCTT
CCCCCCACAGATCCTCAGCAGAGTGCCCCTAGGCCCGCAGATTTTGAGAAAAGGATTCCT
ACACTCCAGGATCTTCAAGCAAGAGGAAGATTAGGATTTTCGGATCTTGACGCACGCACC
TTAGCCTCTCCCAATAGGATCAAGGAG
■■Homology search results ■■ -
sp_hit_id Q00668
Definition sp|Q00668|STCC_EMENI Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans
Align length 51
Score (bit) 31.6
E-value 3.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961601|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_J08, 5'
         (627 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00668|STCC_EMENI Putative sterigmatocystin biosynthesis pero...    32   3.5  
sp|P13725|ONCM_HUMAN Oncostatin-M OS=Homo sapiens GN=OSM PE=1 SV=2     31   4.6  
sp|Q75NY9|SC16B_BOVIN Protein transport protein Sec16B OS=Bos ta...    31   5.9  
sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase 1-binding protein OS=Hom...    30   7.8  

>sp|Q00668|STCC_EMENI Putative sterigmatocystin biosynthesis
           peroxidase stcC OS=Emericella nidulans GN=stcC PE=3 SV=1
          Length = 311

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 78  RSKGSVCTTWP*YSNSELCSPSPGTLPFHSASLLLWCSPKIMC--NGFPNG 224
           R K SV + WP  S S  C+P   +L   S S+ L   P   C  +G P+G
Sbjct: 226 REKRSVGSRWPAMSFSWRCAPQRSSLACRSTSVRLQSRPLTRCHGSGLPSG 276


>sp|P13725|ONCM_HUMAN Oncostatin-M OS=Homo sapiens GN=OSM PE=1 SV=2
          Length = 252

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 511 RPADFEKRIPTLQDLQARGRLGFSDLDARTLASPN 615
           R AD E+R+P  QDL+  G L   DL+   +A PN
Sbjct: 109 RLADLEQRLPKAQDLERSG-LNIEDLEKLQMARPN 142


>sp|Q75NY9|SC16B_BOVIN Protein transport protein Sec16B OS=Bos
           taurus GN=SEC16B PE=2 SV=1
          Length = 1052

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +2

Query: 209 WLPKWLPRPSGHP 247
           W+P+WLP+PSG P
Sbjct: 4   WIPQWLPQPSGRP 16


>sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase 1-binding protein OS=Homo
            sapiens GN=TNKS1BP1 PE=1 SV=3
          Length = 1729

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +1

Query: 415  RPFCSSGGSRCKEAFVRAWHDLPPTD---PQQSAPRPADFEKRIPTLQDLQARG 567
            R + S G SR  +A  R++   P +    P+++  +  +FEK+IP+++D    G
Sbjct: 959  RDYSSGGSSRTLDAQDRSFGTRPLSSGFSPEEAQQQDEEFEKKIPSVEDSLGEG 1012
tr_hit_id B6KCA2
Definition tr|B6KCA2|B6KCA2_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 127
Score (bit) 34.7
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961601|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_J08, 5'
         (627 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KCA2|B6KCA2_TOXGO Putative uncharacterized protein OS=Toxop...    35   4.8  

>tr|B6KCA2|B6KCA2_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_063360 PE=4 SV=1
          Length = 952

 Score = 34.7 bits (78), Expect = 4.8
 Identities = 40/127 (31%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
 Frame = -1

Query: 513 PRGTLLRICG--GKIMPGSDESLFASAASR*TKGS--RGESFVGIWKWRRASMVRFPVQC 346
           P G  L   G  G I   S  SL  SA SR  +G   RG  F G    +R S    P + 
Sbjct: 572 PAGDWLAAAGQTGVISLWSVPSLCVSALSRRGRGEDKRGRKFAGSLTGKRDSERPLPQRD 631

Query: 345 NVYLRMASLMRCFRDADLASVSRAETKHGRDEKGWPEG--------RGSHLGSHCT*SLE 190
             +L M       +DAD   ++ AET H     G   G        RGSH G   T + E
Sbjct: 632 GAHLSM-------KDADKNEMTHAETVHLEKVDGTRRGRTFREMRSRGSHDGGRSTATDE 684

Query: 189 STKEVAM 169
           +    A+
Sbjct: 685 ACHSAAI 691