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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK961647
Clone id TST39A01NGRL0010_L09
Library
Length 588
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_L09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGAACACATAATCAAGAAAGGTAAGCAGGAAGGAAGCCGCACTCATGGCAGCAACAACT
GCCTCCCTCTCCTCATCTGTCTTCAGCGGGCAGCAATTGAAGCCCGTCAATGAGCTCTCT
CGGAAGGTGGGAGCAGGTGAGGCCCGCGTTCAGATGATGGCCCCCAAGAAGTCCTCATCT
GGCAGCATCTGGTACGGTTCCGACCGCCCTCTCTACCTGGGCCCTTTCTCTGGCTCTCCC
CCATCCTACCTCACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACAGCTGGTCTGTCC
GCAGACCCAGAGACCTTCGCCAAGAACAGGGAGCTGGAGGTGATCCATTCCAGATGGGCC
ATGTTGGGAGCCTTGGGCTGTGTGACGCCCGAGCTGCTGGCAAATAACGGTGTCAAGTTT
GGTGAGGCTGTGTGGTTCAAGGCTGGCTCCCACATCTTCGCCGATGGCGGCCTTGATTAT
CTTGGCAACCCGAGCCTTGTCCACGCTCAAAGCATTGTGGCCATTTGGGCCTGCCAAGTC
AACCTTATGGGCGCTGTTGAAGGGTACCGTGTTGCACGTGGACCCCTT
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 170
Score (bit) 328.0
E-value 1.0e-89
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961647|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_L09, 5'
         (588 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   328   1e-89
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   277   3e-74
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   271   1e-72
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   268   2e-71
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   267   3e-71
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   266   7e-71
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   265   1e-70
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   265   1e-70
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   265   2e-70
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   265   2e-70
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   265   2e-70
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   264   3e-70
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   264   3e-70
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   263   4e-70
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   263   4e-70
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   263   5e-70
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   263   5e-70
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   263   6e-70
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   263   6e-70
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   263   6e-70
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   262   8e-70
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   262   1e-69
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   262   1e-69
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   261   2e-69
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...   261   2e-69
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   261   2e-69
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   260   3e-69
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   260   4e-69
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   260   4e-69
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   259   5e-69

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  328 bits (841), Expect = 1e-89
 Identities = 160/170 (94%), Positives = 164/170 (96%), Gaps = 1/170 (0%)
 Frame = +1

Query: 82  FSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLGPFSGSPPSYLTG 258
           FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLGPFSGSPPSYL+G
Sbjct: 12  FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSG 71

Query: 259 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWF 438
           EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA NGVKFGEAVWF
Sbjct: 72  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWF 131

Query: 439 KAGSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           KAGS IFA+GGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYRVA GPL
Sbjct: 132 KAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 181


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  277 bits (708), Expect = 3e-74
 Identities = 137/170 (80%), Positives = 142/170 (83%), Gaps = 1/170 (0%)
 Frame = +1

Query: 82  FSGQQL-KPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTG 258
           F+GQ L KP NEL RKVG    RV M    KS+  SIWYG DRP YLGPFS   PSYLTG
Sbjct: 11  FAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 259 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWF 438
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA NGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 130

Query: 439 KAGSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           KAGS IF +GGLDYLGNP+LVHAQSI+AIWACQV LMGAVEGYRV  GPL
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPL 180


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  271 bits (694), Expect = 1e-72
 Identities = 136/172 (79%), Positives = 149/172 (86%), Gaps = 4/172 (2%)
 Frame = +1

Query: 85  SGQQL-KPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLYLGPFSGSPPSYL 252
           +GQ L KPVNELSRKV G  EARV M      S+GS  IWYG+DRP +LGPFSG  PSYL
Sbjct: 13  AGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 253 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAV 432
            GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLA +GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 433 WFKAGSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           WFKAG+ IF++GGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYRVA GPL
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPL 184



 Score = 32.0 bits (71), Expect = 2.4
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +1

Query: 229 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANN 408
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 409 G 411
           G
Sbjct: 240 G 240


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  268 bits (684), Expect = 2e-71
 Identities = 130/160 (81%), Positives = 140/160 (87%), Gaps = 5/160 (3%)
 Frame = +1

Query: 124 KVGA-GEARVQMMA----PKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEFPGDYGWDT 288
           KVG+ GE R+ M      PK ++SGS WYG DR  YLGPFSG PPSYLTGEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 289 AGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGSHIFADG 468
           AGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL+ NGVKFGEAVWFKAGS IF++G
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 469 GLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           GLDYLGNPSL+HAQSI+AIWACQV LMGAVEGYR+A GPL
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPL 178


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  267 bits (682), Expect = 3e-71
 Identities = 130/156 (83%), Positives = 136/156 (87%), Gaps = 5/156 (3%)
 Frame = +1

Query: 136 GEARVQMM-----APKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 300
           GEARV M      A   +SSGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 301 ADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGSHIFADGGLDY 480
           ADPETFAKNRELEVIHSRWAMLGALGCV PELLA NGVKFGEAVWFKAGS IF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 481 LGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           LGNPSL+HAQSI+AIWACQV LMGA+EGYRVA GPL
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPL 181


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  266 bits (679), Expect = 7e-71
 Identities = 132/171 (77%), Positives = 142/171 (83%), Gaps = 2/171 (1%)
 Frame = +1

Query: 82  FSGQQ-LKPVNELSRKVGA-GEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGSPPSYLT 255
           F+GQ  LK  NEL  K+GA G  RV M    KS+  SIWYG DRP YLGPFS   PSYLT
Sbjct: 11  FAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLT 70

Query: 256 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVW 435
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+ NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 436 FKAGSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           FKAGS IF++GGLDYLGNP+L+HAQSI+AIWACQV LMG VEGYRV  GPL
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPL 181


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  265 bits (678), Expect = 1e-70
 Identities = 129/168 (76%), Positives = 139/168 (82%)
 Frame = +1

Query: 85  SGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEF 264
           +GQ +K         G  +  ++  A K  SSGS WYG DR  YLGPFSG PPSYLTGEF
Sbjct: 4   AGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 63

Query: 265 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKA 444
           PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELL+ NGVKFGEAVWFKA
Sbjct: 64  PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 123

Query: 445 GSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           GS IF++GGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYR+A GPL
Sbjct: 124 GSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPL 171



 Score = 30.4 bits (67), Expect = 6.9
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 229 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANN 408
           +G P   +T        +D  GL+ DPE FA+ +  E+ + R AM    G     ++   
Sbjct: 167 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 226

Query: 409 G 411
           G
Sbjct: 227 G 227


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  265 bits (677), Expect = 1e-70
 Identities = 131/171 (76%), Positives = 141/171 (82%), Gaps = 2/171 (1%)
 Frame = +1

Query: 82  FSGQQL-KPVNELSRKVGA-GEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGSPPSYLT 255
           F GQ + K  NE  RKVG  GE R+ M    KS+  SIWYG DRP YLGPFS   PSYLT
Sbjct: 11  FVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 256 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVW 435
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+ NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 436 FKAGSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           FKAGS IF++GGLDYLGNP+LVHAQSI+AIWACQV LMG VEGYRV  GPL
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPL 181


>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member
           1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1
          Length = 278

 Score =  265 bits (676), Expect = 2e-70
 Identities = 136/179 (75%), Positives = 146/179 (81%), Gaps = 10/179 (5%)
 Frame = +1

Query: 82  FSGQQL---KPVNELSRKVGA--GEARVQMMAP--KKSSSGSI---WYGSDRPLYLGPFS 231
           F+G QL   KP N     VG   GEAR+ M     KKS + SI   WYG DR LYLGPFS
Sbjct: 16  FAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFS 75

Query: 232 GSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNG 411
           G PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV PELLA NG
Sbjct: 76  GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 135

Query: 412 VKFGEAVWFKAGSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           VKFGEAVWFKAG+ IF++GGLDYLG+P L+HAQSI+AIWACQV LMGA+EGYRVA GPL
Sbjct: 136 VKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPL 194



 Score = 30.0 bits (66), Expect = 9.0
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = +1

Query: 229 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANN 408
           +G P   +T        +D  GL+ DP+ FA+ +  E+ + R AM    G     ++   
Sbjct: 190 AGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 249

Query: 409 G 411
           G
Sbjct: 250 G 250


>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R
           PE=2 SV=2
          Length = 261

 Score =  265 bits (676), Expect = 2e-70
 Identities = 127/155 (81%), Positives = 136/155 (87%), Gaps = 4/155 (2%)
 Frame = +1

Query: 136 GEARVQMMA----PKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 303
           GE R+ M      PK ++SGS WYG+DR LYLGP SG PPSYLTGEFPGDYGWDTAGLSA
Sbjct: 23  GEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 82

Query: 304 DPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGSHIFADGGLDYL 483
           DPETFAKNRELEVIHSRWAMLGALGCV PELLA NGVKFGEAVWFKAGS IF++GGLDYL
Sbjct: 83  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 142

Query: 484 GNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           GNPSL+HAQSI+AIWA QV LMGAVEGYR+A GPL
Sbjct: 143 GNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPL 177
tr_hit_id Q5CCK8
Definition tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum capillus-veneris
Align length 170
Score (bit) 321.0
E-value 2.0e-86
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK961647|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_L09, 5'
         (588 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   321   2e-86
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   284   3e-75
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   283   4e-75
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   281   3e-74
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   280   3e-74
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   280   3e-74
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   280   4e-74
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   279   7e-74
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   278   1e-73
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   278   2e-73
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   276   5e-73
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   276   6e-73
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   273   5e-72
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   272   9e-72
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   270   3e-71
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   270   4e-71
tr|Q4VV47|Q4VV47_PICSI Chloroplast light harvesting chlorophyll ...   269   8e-71
tr|Q40770|Q40770_PICAB Light harvesting chlorophyll a /b-binding...   269   8e-71
tr|A9NK15|A9NK15_PICSI Putative uncharacterized protein OS=Picea...   269   8e-71
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   269   1e-70
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   269   1e-70
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   269   1e-70
tr|A9SGM1|A9SGM1_PHYPA Predicted protein OS=Physcomitrella paten...   269   1e-70
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   268   1e-70
tr|Q93XK4|Q93XK4_PINCO Chlorophyll a/b binding protein OS=Pinus ...   268   1e-70
tr|Q40771|Q40771_PICAB Light harvesting chlorophyll a /b-binding...   268   1e-70
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T...   268   1e-70
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   268   2e-70
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   268   2e-70
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   268   2e-70

>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
           capillus-veneris GN=AcCab1 PE=4 SV=1
          Length = 215

 Score =  321 bits (823), Expect = 2e-86
 Identities = 158/170 (92%), Positives = 161/170 (94%)
 Frame = +1

Query: 79  VFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTG 258
           VFSGQQLKPVNELSRKVG  EARVQMMAPKKSSSG+I YG+DR LYLGPFSGSPPSYLTG
Sbjct: 19  VFSGQQLKPVNELSRKVGTSEARVQMMAPKKSSSGNIRYGADRLLYLGPFSGSPPSYLTG 78

Query: 259 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWF 438
           EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA NGVKFGEAVWF
Sbjct: 79  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWF 138

Query: 439 KAGSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           KAGS IFADGGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYRVA  PL
Sbjct: 139 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAVVPL 188


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  284 bits (726), Expect = 3e-75
 Identities = 136/164 (82%), Positives = 148/164 (90%)
 Frame = +1

Query: 97  LKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEFPGDY 276
           LKPVNELSRKVG+ EARV M    KS+S SIWYG+DRP YLGPFSG  PSYLTGEF GDY
Sbjct: 18  LKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGPFSGETPSYLTGEFAGDY 77

Query: 277 GWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGSHI 456
           GWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLA +GVKFGEAVWFKAG+ I
Sbjct: 78  GWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQI 137

Query: 457 FADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           F++GGLDYLGNPSLVHAQSI+AIWA QV LMGAVEGYRVA GPL
Sbjct: 138 FSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGPL 181


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  283 bits (725), Expect = 4e-75
 Identities = 137/164 (83%), Positives = 146/164 (89%)
 Frame = +1

Query: 97  LKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEFPGDY 276
           LKPVNELSRKVG  EARV M   K S S SIWYG+DRP +LGPFSG  PSYL GEF GDY
Sbjct: 18  LKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDY 75

Query: 277 GWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGSHI 456
           GWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLA NGVKFGEAVWFKAG+ I
Sbjct: 76  GWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQI 135

Query: 457 FADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           F++GGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYRVA GPL
Sbjct: 136 FSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 179


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  281 bits (718), Expect = 3e-74
 Identities = 135/164 (82%), Positives = 144/164 (87%)
 Frame = +1

Query: 97  LKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEFPGDY 276
           LKPVNELSRKVG  EAR+ M      SS SIWYG+DRP YLGPFSG  PSYL GEF GDY
Sbjct: 18  LKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGEFAGDY 77

Query: 277 GWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGSHI 456
           GWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLA NGVKFGEAVWFKAG+ I
Sbjct: 78  GWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQI 137

Query: 457 FADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           F++GGLDYLGNPSLVHAQSI+AIWA QV LMGAVEGYRVA GPL
Sbjct: 138 FSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPL 181


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  280 bits (717), Expect = 3e-74
 Identities = 138/173 (79%), Positives = 151/173 (87%), Gaps = 3/173 (1%)
 Frame = +1

Query: 79  VFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYLGPFSGSPPSY 249
           V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +LGPFSG  PSY
Sbjct: 12  VLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSY 71

Query: 250 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEA 429
           L GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLA +GVKFGEA
Sbjct: 72  LNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEA 131

Query: 430 VWFKAGSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           VWFKAG+ IF++GGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYRVA GPL
Sbjct: 132 VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 184


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  280 bits (717), Expect = 3e-74
 Identities = 138/173 (79%), Positives = 151/173 (87%), Gaps = 3/173 (1%)
 Frame = +1

Query: 79  VFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYLGPFSGSPPSY 249
           V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +LGPFSG  PSY
Sbjct: 12  VLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSY 71

Query: 250 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEA 429
           L GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLA +GVKFGEA
Sbjct: 72  LNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEA 131

Query: 430 VWFKAGSHIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           VWFKAG+ IF++GGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYRVA GPL
Sbjct: 132 VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 184


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  280 bits (716), Expect = 4e-74
 Identities = 135/166 (81%), Positives = 147/166 (88%), Gaps = 2/166 (1%)
 Frame = +1

Query: 97  LKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYLGPFSGSPPSYLTGEFPG 270
           LKPVNELSRKVG+ +ARV M      S+GS  IWYG+DRP YLGPFSG  PSYL GEF G
Sbjct: 18  LKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLNGEFAG 77

Query: 271 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGS 450
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLA +GVKFGEAVWFKAG+
Sbjct: 78  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGA 137

Query: 451 HIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
            IF++GGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYRVA GPL
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 183


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  279 bits (714), Expect = 7e-74
 Identities = 134/164 (81%), Positives = 147/164 (89%)
 Frame = +1

Query: 97  LKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEFPGDY 276
           LKPVNELSR+VGA EARV M   K + S SIWYG+DRP +LGPFSG  PSYL GEF GDY
Sbjct: 18  LKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDY 75

Query: 277 GWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGSHI 456
           GWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLA +GVKFGEAVWFKAG+ I
Sbjct: 76  GWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQI 135

Query: 457 FADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
           F++GGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYRVA GPL
Sbjct: 136 FSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 179


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  278 bits (712), Expect = 1e-73
 Identities = 135/166 (81%), Positives = 147/166 (88%), Gaps = 2/166 (1%)
 Frame = +1

Query: 97  LKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEFPG 270
           LKPVNELSRKVG  EARV M     K + S SIWYG+DRP +LGPFSG  PSYLTGEF G
Sbjct: 18  LKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLTGEFAG 77

Query: 271 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGS 450
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLA +GVKFGEAVWFKAG+
Sbjct: 78  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGA 137

Query: 451 HIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
            IF++GGLDYLGNPSLVHAQSI+AIWACQV LMGAVEGYRVA GPL
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPL 183


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  278 bits (710), Expect = 2e-73
 Identities = 136/166 (81%), Positives = 147/166 (88%), Gaps = 2/166 (1%)
 Frame = +1

Query: 97  LKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYLGPFSGSPPSYLTGEFPG 270
           LKPVNELSRKVG  EARV M   A K ++S SIWYG+DRP YLGPFSG  PSYL GEF G
Sbjct: 18  LKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLNGEFAG 77

Query: 271 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLANNGVKFGEAVWFKAGS 450
           DYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLA +GVKFGEAVWFKAG+
Sbjct: 78  DYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGA 137

Query: 451 HIFADGGLDYLGNPSLVHAQSIVAIWACQVNLMGAVEGYRVARGPL 588
            IF++GGLDYLGNPSLVHAQSI+AIWA QV LMGAVEGYRVA GPL
Sbjct: 138 QIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPL 183