DK961648
Clone id TST39A01NGRL0010_L10
Library
Length 605
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_L10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TTGTACGCAGTATTCAGTATGGCCATCTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCT
AGCTGCGCCCCCGCAGAGAGCTTTTCAAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTG
TTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATGGCAGCCGTGTGAGCGCCATG
CTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTG
TCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGC
ATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGCTACTAC
GATGGGCGGTTTTTTTTTCCCCCCCCCCCTGCCCATGTTTGGCTGCCAAGAAAAAAAAGG
GGGTGGTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGC
TGGGCTTTGACGCTNAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTG
TCTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCCATTTCCCA
CTGGC
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 99
Score (bit) 103.0
E-value 4.0e-32
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961648|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_L10, 5'
(605 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 103 4e-32
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 102 2e-31
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 107 4e-31
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 108 4e-31
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 100 5e-31
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 103 7e-31
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 107 1e-30
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 107 1e-30
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 107 1e-30
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 100 1e-30
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 107 2e-30
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 100 3e-30
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha... 102 5e-30
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 99 5e-30
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 100 5e-30
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 99 7e-30
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 109 7e-30
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 99 9e-30
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 104 9e-30
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 97 1e-29
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 107 1e-29
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 103 1e-29
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai... 96 2e-29
sp|Q08183|RBS3_MESCR Ribulose bisphosphate carboxylase small cha... 101 2e-29
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 99 2e-29
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 103 2e-29
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 103 2e-29
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 103 2e-29
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 98 3e-29
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 102 3e-29

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 103 bits (258), Expect(2) = 4e-32
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 5/99 (5%)
Frame = +1

Query: 94 FSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 261
F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS E ++K
Sbjct: 26 FTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSK 85

Query: 262 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRFF 375
++D+++R W PC+EF+ + G VYREH H GYYDGR++
Sbjct: 86 EIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYW 124



Score = 55.1 bits (131), Expect(2) = 4e-32
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 536
V++E+ EC KEYP AFIRV+GFD RQVQ F+V KP
Sbjct: 140 VMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
Length = 178

Score = 102 bits (255), Expect(2) = 2e-31
Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Frame = +1

Query: 94 FSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 264
F+GLK++ F K N + SNGSRV+ M VW P KKFETLSYLPPL+ EQ+ K+
Sbjct: 25 FTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKE 84

Query: 265 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRFF 375
V++++RKGW PC+EF+ + G V+R++ GYYDGR++
Sbjct: 85 VEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYW 122



Score = 53.9 bits (128), Expect(2) = 2e-31
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPSV 542
V++E+AEC EYPEAFIR++GFD RQVQ F+ P V
Sbjct: 138 VLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177


>sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Medicago sativa PE=2 SV=1
Length = 180

Score = 107 bits (266), Expect(2) = 4e-31
Identities = 52/99 (52%), Positives = 71/99 (71%), Gaps = 5/99 (5%)
Frame = +1

Query: 94 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 261
F+GLK++ F K+ N + SNG RV+ M VW P KKFETLSYLPPL+ EQ+AK
Sbjct: 26 FTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAK 85

Query: 262 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRFF 375
+V++++RKGW PC+EF+ + G VYRE+ GYYDGR++
Sbjct: 86 EVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYW 124



Score = 48.5 bits (114), Expect(2) = 4e-31
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 536
V++E+A+C EYP++FIR++GFD RQVQ F+ P
Sbjct: 140 VLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 108 bits (269), Expect(2) = 4e-31
Identities = 51/95 (53%), Positives = 64/95 (67%)
Frame = +1

Query: 91 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 270
S + T FA S P SNG RV M VW P KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31 SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 271 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRFF 375
+++R GW PCIEF K+G VYRE+ + GYYDGR++
Sbjct: 88 YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYW 122



Score = 47.4 bits (111), Expect(2) = 4e-31
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 536
V++E+ EC+K YP+ F R++GFD RQVQ FL KP
Sbjct: 138 VLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
Length = 171

Score = 100 bits (248), Expect(2) = 5e-31
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 8/103 (7%)
Frame = +1

Query: 91 SFSGLKATTLFAP--KSPNPLA------ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 246
+F+GLK+T F K N A SNG RV M VW P+ N KFETLSYLP L+
Sbjct: 15 AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74

Query: 247 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRFF 375
EQ+ K+V++++R W PC+EFD GS+ R++ GYYDGR++
Sbjct: 75 EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYW 117



Score = 55.1 bits (131), Expect(2) = 5e-31
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 536
V+ E+ ECAK YP+AFIRV+GFD RQVQ F+V KP
Sbjct: 133 VINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 103 bits (256), Expect(2) = 7e-31
Identities = 54/99 (54%), Positives = 69/99 (69%), Gaps = 5/99 (5%)
Frame = +1

Query: 94 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 261
F+ LK+T+ F K+ N + SNG RV M VW P KKFETLSYLPPLSSEQ+AK
Sbjct: 28 FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 262 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRFF 375
+VD+++RK PC+EF+ + G VYREH GYYDGR++
Sbjct: 88 EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYW 126



Score = 51.6 bits (122), Expect(2) = 7e-31
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 536
V++E+ EC K YP AFIR++GFD RQVQ+ F+ KP
Sbjct: 142 VLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 107 bits (268), Expect(2) = 1e-30
Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Frame = +1

Query: 94 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 261
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 262 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRFF 375
+VD+++R W PCIEF K G VYRE+ GYYDGR++
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYW 123



Score = 46.2 bits (108), Expect(2) = 1e-30
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+ E+ E K YPE F+R++GFD RQVQ F+ KP+
Sbjct: 139 VIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 107 bits (268), Expect(2) = 1e-30
Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Frame = +1

Query: 94 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 261
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 262 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRFF 375
+VD+++R W PCIEF K G VYRE+ GYYDGR++
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYW 123



Score = 46.2 bits (108), Expect(2) = 1e-30
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+ E+ E K YPE F+R++GFD RQVQ F+ KP+
Sbjct: 139 VIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
Length = 183

Score = 107 bits (266), Expect(2) = 1e-30
Identities = 54/98 (55%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
Frame = +1

Query: 94 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 264
F+GLK+++ F KS + +I SNG RV M VW P KKFETLSYLPPLSSE +AK+
Sbjct: 30 FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 265 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRFF 375
VD+++RK W PC+EF+ + G VYRE+ GYYDGR++
Sbjct: 90 VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYW 127



Score = 46.6 bits (109), Expect(2) = 1e-30
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V++E+ E K YP++FIR++GFD RQVQ F+ KP+
Sbjct: 143 VLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
PE=1 SV=2
Length = 180

Score = 100 bits (250), Expect(2) = 1e-30
Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 5/99 (5%)
Frame = +1

Query: 94 FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 261
F+GLK++ F K+ N + SNG RV+ M VW P KKFETLSYLP L+ ++AK
Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 262 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRFF 375
+VD+++R W PC+EF+ + G VYREH + GYYDGR++
Sbjct: 84 EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYW 122



Score = 52.8 bits (125), Expect(2) = 1e-30
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 536
V++E+ EC KEYP AFIR++GFD RQVQ F+ KP
Sbjct: 138 VLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 97
Score (bit) 186.0
E-value 2.0e-60
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK961648|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0010_L10, 5'
(605 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 186 2e-60
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 121 1e-35
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 118 9e-35
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 118 9e-35
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 118 9e-35
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 118 1e-34
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 115 6e-34
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 108 7e-32
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 107 9e-32
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 107 1e-31
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 104 1e-31
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 106 3e-31
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 106 3e-31
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 107 7e-31
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 103 2e-30
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 104 2e-30
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 102 4e-30
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 102 4e-30
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 101 6e-30
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 103 6e-30
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 110 6e-30
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 106 1e-29
tr|B7FHB2|B7FHB2_MEDTR Putative uncharacterized protein OS=Medic... 108 2e-29
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 100 2e-29
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c... 103 2e-29
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c... 103 2e-29
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 101 2e-29
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 99 2e-29
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c... 100 4e-29
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c... 107 4e-29

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 186 bits (471), Expect(2) = 2e-60
Identities = 85/97 (87%), Positives = 93/97 (95%)
Frame = +1

Query: 85 SKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 264
SKSFSGLKA TLFAPK NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAKQ
Sbjct: 23 SKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQ 82

Query: 265 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRFF 375
V++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGR++
Sbjct: 83 VEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYW 119



Score = 71.2 bits (173), Expect(2) = 2e-60
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REIAECAKEYP AFIRVLGFDA RQVQV+GFLV+KPS
Sbjct: 135 VLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 121 bits (304), Expect(2) = 1e-35
Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
Frame = +1

Query: 88 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 267
K FSGLK+TTLFA K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 268 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRFF 375
DFM+++ PCIEFD +GSV R +F G SGYYDGR++
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYW 125



Score = 52.4 bits (124), Expect(2) = 1e-35
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REI EC + +P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 141 VLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 118 bits (295), Expect(2) = 9e-35
Identities = 56/99 (56%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
Frame = +1

Query: 88 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 267
K+FSGLK+ TLF+ K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 268 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRFF 375
D+M+++ PCIEFD +GSV R +F G SGYYDGR++
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYW 160



Score = 53.1 bits (126), Expect(2) = 9e-35
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REI EC ++P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 176 VLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 118 bits (295), Expect(2) = 9e-35
Identities = 56/99 (56%), Positives = 71/99 (71%), Gaps = 3/99 (3%)
Frame = +1

Query: 88 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 267
K+FSGLK+ TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QV
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 268 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRFF 375
D+M+++ PCIEFD +G+V R +F G SGYYDGR++
Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYW 130



Score = 53.1 bits (126), Expect(2) = 9e-35
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REI EC YP ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 146 VLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 118 bits (295), Expect(2) = 9e-35
Identities = 57/99 (57%), Positives = 71/99 (71%), Gaps = 3/99 (3%)
Frame = +1

Query: 88 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 267
K+FSGLK TLF+ K+ A+ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 268 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRFF 375
D+M+++ PCIEFD +GSV R +F G SGYYDGR++
Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYW 130



Score = 53.1 bits (126), Expect(2) = 9e-35
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REI EC ++P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 146 VLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 118 bits (296), Expect(2) = 1e-34
Identities = 58/99 (58%), Positives = 71/99 (71%), Gaps = 3/99 (3%)
Frame = +1

Query: 88 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 267
K FSGLK+TTL A K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 268 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRFF 375
DFM+++ PCIEFD +GSV R +F G SGYYDGR++
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYW 125



Score = 52.4 bits (124), Expect(2) = 1e-34
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REI EC + +P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 141 VLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 115 bits (289), Expect(2) = 6e-34
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
Frame = +1

Query: 88 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 267
K+FSGLK+ TLF+ ++ ++ NGSRV M VW P KFET SYLPPL+ ++IAKQV
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 268 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRFF 375
D+M+++ PCIEFD +GSV R +F G SGYYDGR++
Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYW 129



Score = 52.8 bits (125), Expect(2) = 6e-34
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REI EC ++P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 145 VLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146969 PE=3 SV=1
Length = 181

Score = 108 bits (269), Expect(2) = 7e-32
Identities = 50/96 (52%), Positives = 67/96 (69%)
Frame = +1

Query: 88 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 267
K+FSGLK++TLF+ K+ + ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 268 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRFF 375
D+M+++ PC+EFD V R + GYYDGR++
Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYW 127



Score = 53.5 bits (127), Expect(2) = 7e-32
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REI EC K +P F+RVLGFD +QVQ+ GFLV +P+
Sbjct: 143 VLREIEECKKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_115069 PE=3 SV=1
Length = 181

Score = 107 bits (268), Expect(2) = 9e-32
Identities = 49/96 (51%), Positives = 66/96 (68%)
Frame = +1

Query: 88 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 267
K+FSGLK+ T+F+ K+ N ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 268 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRFF 375
++M+++ PC+EFD V R + GYYDGR++
Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYW 127



Score = 53.5 bits (127), Expect(2) = 9e-32
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REI EC K +P F+RVLGFD +QVQ+ GFLV +P+
Sbjct: 143 VLREIEECKKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_123666 PE=3 SV=1
Length = 181

Score = 107 bits (267), Expect(2) = 1e-31
Identities = 50/96 (52%), Positives = 67/96 (69%)
Frame = +1

Query: 88 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 267
K+FSGLK+ TLF+ +S ++ NGSRV+ M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 268 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRFF 375
++M+++ PC+EFD V RE+ GYYDGR++
Sbjct: 92 EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYW 127



Score = 53.5 bits (127), Expect(2) = 1e-31
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3

Query: 423 VVREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 539
V+REI EC K +P F+RVLGFD +QVQ+ GFLV +P+
Sbjct: 143 VLREIEECKKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181