DK961665 |
Clone id |
TST39A01NGRL0010_M05 |
Library |
TST39 |
Length |
650 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0010_M05. 5' end sequence. |
Accession |
DK961665 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL211Contig1 |
Sequence |
CAGAAGGTAGAGAAACACGAGCTTCTTGAGTTCCGGCGGATTGCTGCTCTTATTTACAAG AAAGCTGGAAGGTGGAGGCAGTCAGTTGCTTTGTCAAAGAAGGACAACCTGTACAAAGAT GCTATGGAGACATGCTCACAATCTGGGGATCGTGACCTTGCGGAGGAGCTTTTAACTTTC TTTGTAGAACAGGGAAAGAAAGAGTGCTTTGCATCCTGTCTGTTTACTTGTTATGATTTG ATTCGAGCTGATGTTGCCCTGGAGCTTGCATGGATGAACAACATTCTTGATTTTGTGTTC CCATATTTCATGCAGTTCTTGAGAGAATATACAAGTAAAGTTGATGACCTCGTCAAGGAT AAACTGAAAGCCCAACAAGAGGAAAAATCCAAGGAAGCTGAGGAGAAGGAGCTGGTTGCT CAGCAGAATATGTATGCTCAATTATTGCCACTTGCACTACCTGCTCCACCGATGCCTGGT ATGGGTGGTGGGTATGATCCCGGATTTGTTGGAGGAATGCCAGGGATGCCTGGGATGCCT GGCATGCCGGCGTATGGAATGCCACCCATGGCTGGATATTGATTTTGTACCATTCAACAT CTCTATGGGTTTTAAGGAGGCGGCGAAAAATGCACTCACCGATGTGTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P11442 |
Definition |
sp|P11442|CLH_RAT Clathrin heavy chain 1 OS=Rattus norvegicus |
Align length |
110 |
Score (bit) |
154.0 |
E-value |
5.0e-37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2RBN7 |
Definition |
tr|Q2RBN7|Q2RBN7_ORYSJ Clathrin heavy chain, putative, expressed OS=Oryza sativa subsp. japonica |
Align length |
145 |
Score (bit) |
207.0 |
E-value |
6.0e-52 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961665|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0010_M05, 5' (650 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2RBN7|Q2RBN7_ORYSJ Clathrin heavy chain, putative, expressed... 207 6e-52 tr|Q2QYW2|Q2QYW2_ORYSJ Clathrin heavy chain, putative, expressed... 207 6e-52 tr|Q0IV90|Q0IV90_ORYSJ Os11g0104900 protein OS=Oryza sativa subs... 207 6e-52 tr|B8BNS6|B8BNS6_ORYSI Putative uncharacterized protein OS=Oryza... 207 6e-52 tr|A3CE52|A3CE52_ORYSJ Putative uncharacterized protein OS=Oryza... 207 6e-52 tr|A3CE45|A3CE45_ORYSJ Putative uncharacterized protein OS=Oryza... 207 6e-52 tr|A2ZH90|A2ZH90_ORYSI Putative uncharacterized protein OS=Oryza... 207 6e-52 tr|B4FF84|B4FF84_MAIZE Putative uncharacterized protein OS=Zea m... 206 1e-51 tr|A7NYC7|A7NYC7_VITVI Chromosome chr6 scaffold_3, whole genome ... 203 6e-51 tr|A9RFW2|A9RFW2_PHYPA Predicted protein OS=Physcomitrella paten... 197 4e-49 tr|A7Q3K1|A7Q3K1_VITVI Chromosome chr13 scaffold_48, whole genom... 197 5e-49 tr|A5ACP0|A5ACP0_VITVI Putative uncharacterized protein OS=Vitis... 197 5e-49 tr|A9T0L4|A9T0L4_PHYPA Predicted protein OS=Physcomitrella paten... 196 8e-49 tr|Q9SRM1|Q9SRM1_ARATH Clathrin heavy chain, putative; 28833-197... 194 4e-48 tr|Q0WNJ6|Q0WNJ6_ARATH Putative uncharacterized protein At3g1113... 194 4e-48 tr|Q0WM81|Q0WM81_ARATH Putative uncharacterized protein At3g1113... 194 4e-48 tr|A9U2Z4|A9U2Z4_PHYPA Predicted protein OS=Physcomitrella paten... 192 1e-47 tr|Q9C6U0|Q9C6U0_ARATH Clathrin heavy chain, putative OS=Arabido... 192 2e-47 tr|Q8L3R8|Q8L3R8_ARATH AT3g08530/T8G24_1 OS=Arabidopsis thaliana... 192 2e-47 tr|Q0WLB5|Q0WLB5_ARATH Putative uncharacterized protein At3g0853... 192 2e-47 tr|Q39834|Q39834_SOYBN Clathrin heavy chain OS=Glycine max PE=2 ... 189 1e-46 tr|A9TN62|A9TN62_PHYPA Predicted protein OS=Physcomitrella paten... 182 2e-44 tr|B3DK43|B3DK43_DANRE Clathrin, heavy polypeptide a (Hc) OS=Dan... 160 8e-38 tr|Q6DRI2|Q6DRI2_DANRE Clatherin heavy chain OS=Danio rerio GN=c... 158 2e-37 tr|Q5XHB7|Q5XHB7_XENTR Hypothetical LOC496448 OS=Xenopus tropica... 156 1e-36 tr|Q8UUR1|Q8UUR1_CHICK Clathrin heavy-chain (Fragment) OS=Gallus... 155 2e-36 tr|Q6GNR4|Q6GNR4_XENLA MGC80936 protein OS=Xenopus laevis GN=clt... 155 2e-36 tr|Q8K2I5|Q8K2I5_MOUSE Cltc protein (Fragment) OS=Mus musculus G... 154 6e-36 tr|Q80U89|Q80U89_MOUSE MKIAA0034 protein (Fragment) OS=Mus muscu... 154 6e-36 tr|Q5SXR7|Q5SXR7_MOUSE Clathrin, heavy polypeptide (Hc) (Fragmen... 154 6e-36
>tr|Q2RBN7|Q2RBN7_ORYSJ Clathrin heavy chain, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g01380 PE=4 SV=1 Length = 1708
Score = 207 bits (526), Expect = 6e-52 Identities = 99/145 (68%), Positives = 112/145 (77%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 QK+EKHELLE RRIAA IYKKAGRW+QS+ALSKKDN+YKD METCSQSGDR+L+E+LL + Sbjct: 1511 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 1570
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 F+EQGKKECFASCLF CYDLIRADVALELAWMNN++DF FPY +QF+REYTS Sbjct: 1571 FIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREYTSKVDELVKD 1630
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 VAQQNMY Sbjct: 1631 RIESQNEVRAKEKEEKDLVAQQNMY 1655
>tr|Q2QYW2|Q2QYW2_ORYSJ Clathrin heavy chain, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g01390 PE=4 SV=1 Length = 1708
Score = 207 bits (526), Expect = 6e-52 Identities = 99/145 (68%), Positives = 112/145 (77%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 QK+EKHELLE RRIAA IYKKAGRW+QS+ALSKKDN+YKD METCSQSGDR+L+E+LL + Sbjct: 1511 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 1570
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 F+EQGKKECFASCLF CYDLIRADVALELAWMNN++DF FPY +QF+REYTS Sbjct: 1571 FIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREYTSKVDELVKD 1630
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 VAQQNMY Sbjct: 1631 RIESQNEVRAKEKEEKDLVAQQNMY 1655
>tr|Q0IV90|Q0IV90_ORYSJ Os11g0104900 protein OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=4 SV=1 Length = 1695
Score = 207 bits (526), Expect = 6e-52 Identities = 99/145 (68%), Positives = 112/145 (77%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 QK+EKHELLE RRIAA IYKKAGRW+QS+ALSKKDN+YKD METCSQSGDR+L+E+LL + Sbjct: 1498 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 1557
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 F+EQGKKECFASCLF CYDLIRADVALELAWMNN++DF FPY +QF+REYTS Sbjct: 1558 FIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREYTSKVDELVKD 1617
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 VAQQNMY Sbjct: 1618 RIESQNEVRAKEKEEKDLVAQQNMY 1642
>tr|B8BNS6|B8BNS6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37138 PE=4 SV=1 Length = 1497
Score = 207 bits (526), Expect = 6e-52 Identities = 99/145 (68%), Positives = 112/145 (77%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 QK+EKHELLE RRIAA IYKKAGRW+QS+ALSKKDN+YKD METCSQSGDR+L+E+LL + Sbjct: 1300 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 1359
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 F+EQGKKECFASCLF CYDLIRADVALELAWMNN++DF FPY +QF+REYTS Sbjct: 1360 FIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREYTSKVDELVKD 1419
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 VAQQNMY Sbjct: 1420 RIESQNEVRAKEKEEKDLVAQQNMY 1444
>tr|A3CE52|A3CE52_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_033574 PE=4 SV=1 Length = 1708
Score = 207 bits (526), Expect = 6e-52 Identities = 99/145 (68%), Positives = 112/145 (77%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 QK+EKHELLE RRIAA IYKKAGRW+QS+ALSKKDN+YKD METCSQSGDR+L+E+LL + Sbjct: 1511 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 1570
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 F+EQGKKECFASCLF CYDLIRADVALELAWMNN++DF FPY +QF+REYTS Sbjct: 1571 FIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREYTSKVDELVKD 1630
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 VAQQNMY Sbjct: 1631 RIESQNEVRAKEKEEKDLVAQQNMY 1655
>tr|A3CE45|A3CE45_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_033567 PE=4 SV=1 Length = 1708
Score = 207 bits (526), Expect = 6e-52 Identities = 99/145 (68%), Positives = 112/145 (77%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 QK+EKHELLE RRIAA IYKKAGRW+QS+ALSKKDN+YKD METCSQSGDR+L+E+LL + Sbjct: 1511 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 1570
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 F+EQGKKECFASCLF CYDLIRADVALELAWMNN++DF FPY +QF+REYTS Sbjct: 1571 FIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREYTSKVDELVKD 1630
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 VAQQNMY Sbjct: 1631 RIESQNEVRAKEKEEKDLVAQQNMY 1655
>tr|A2ZH90|A2ZH90_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37152 PE=4 SV=1 Length = 1561
Score = 207 bits (526), Expect = 6e-52 Identities = 99/145 (68%), Positives = 112/145 (77%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 QK+EKHELLE RRIAA IYKKAGRW+QS+ALSKKDN+YKD METCSQSGDR+L+E+LL + Sbjct: 1364 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 1423
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 F+EQGKKECFASCLF CYDLIRADVALELAWMNN++DF FPY +QF+REYTS Sbjct: 1424 FIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREYTSKVDELVKD 1483
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 VAQQNMY Sbjct: 1484 RIESQNEVRAKEKEEKDLVAQQNMY 1508
>tr|B4FF84|B4FF84_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 318
Score = 206 bits (524), Expect = 1e-51 Identities = 99/145 (68%), Positives = 111/145 (76%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 QK+EKHELLE RRIAA IYKKAGRW+QS+ALSKKDN+YKD METCSQSGDR+L+E+LL + Sbjct: 119 QKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVY 178
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 F+EQGKKECFASCLF CYDLIR DVALELAWMNN+LDF FPY +QF+REYTS Sbjct: 179 FIEQGKKECFASCLFICYDLIRPDVALELAWMNNMLDFAFPYLLQFIREYTSKVDDLVKD 238
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 VAQQNMY Sbjct: 239 RIESQNEERVKEKEEKDLVAQQNMY 263
>tr|A7NYC7|A7NYC7_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024069001 PE=4 SV=1 Length = 1559
Score = 203 bits (517), Expect = 6e-51 Identities = 99/145 (68%), Positives = 108/145 (74%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 QKVEKHELLE RRIAA IYKKAGRW+QS+ALSKKDNLYKDAMETCSQSGDR+LAEELL + Sbjct: 1365 QKVEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNLYKDAMETCSQSGDRELAEELLVY 1424
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 F+EQ KKECFASCLF CYDLIR DV LELAWMNN++DF FPY +QF+REYT Sbjct: 1425 FIEQKKKECFASCLFVCYDLIRPDVVLELAWMNNMIDFAFPYLLQFIREYTGKVDDLVKD 1484
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 V QQNMY Sbjct: 1485 RIEALKETKAKEEEEKDVVKQQNMY 1509
>tr|A9RFW2|A9RFW2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158810 PE=4 SV=1 Length = 1712
Score = 197 bits (502), Expect = 4e-49 Identities = 94/145 (64%), Positives = 111/145 (76%) Frame = +1
Query: 1 QKVEKHELLEFRRIAALIYKKAGRWRQSVALSKKDNLYKDAMETCSQSGDRDLAEELLTF 180 Q++EKHELLE RR+ A IYK+AGRW+QSVALSKKDNLYKDAMETCSQSGDR+LAEELLTF Sbjct: 1511 QRIEKHELLEMRRVGAYIYKRAGRWKQSVALSKKDNLYKDAMETCSQSGDRELAEELLTF 1570
Query: 181 FVEQGKKECFASCLFTCYDLIRADVALELAWMNNILDFVFPYFMQFLREYTSXXXXXXXX 360 FV++GKKECFA+CL+TCYDLIRADVA+ELAWM+ ++DF PY +QFLREY+S Sbjct: 1571 FVDKGKKECFAACLYTCYDLIRADVAVELAWMHGMMDFAVPYLLQFLREYSSKVDDLIKD 1630
Query: 361 XXXXXXXXXXXXXXXXXXVAQQNMY 435 VA+ NMY Sbjct: 1631 KLEATEEKKSKEQQEKDVVAESNMY 1655
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